Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_C23
         (790 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   2.7  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    25   3.5  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   8.1  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +2

Query: 518 VDEHSSDTIEHFHRRIQIHSFQNLSEVEAFYTRNIRILKDKYGVLL 655
           V + +   IE    +I+  + Q  +EVEA  T N+  LKD+  VLL
Sbjct: 419 VPKKNKKEIEESEAKIESLTRQK-TEVEAKLTANLATLKDETKVLL 463


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 213 KKMFSDVGRKVFNSVLMNPAPSFSRRVDLALRSPQYKDF 329
           KK+F    R     +LMN  PS ++ V + L  P+  DF
Sbjct: 150 KKIFGR-SRSNLQLLLMNAFPSVAKLVGIKLILPEVSDF 187


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 119 YNSTTAVCRFQSFQPRRHIEIYT 51
           Y   T VC  +SF+ RR  + +T
Sbjct: 316 YGGKTCVCCIESFRRRRRRDAFT 338


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 888,346
Number of Sequences: 2352
Number of extensions: 17942
Number of successful extensions: 45
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)