Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_C23
         (790 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058544-1|AAL13773.1|  560|Drosophila melanogaster LD24478p pro...   134   2e-31
AE014298-2788|AAF48903.1|  560|Drosophila melanogaster CG7332-PA...   134   2e-31
AY119452-1|AAM50106.1|  456|Drosophila melanogaster AT28654p pro...    29   7.2  
AE013599-2389|AAO41367.1|  456|Drosophila melanogaster CG9002-PB...    29   7.2  
AE013599-2388|AAF57924.2|  456|Drosophila melanogaster CG9002-PA...    29   7.2  

>AY058544-1|AAL13773.1|  560|Drosophila melanogaster LD24478p
           protein.
          Length = 560

 Score =  134 bits (323), Expect = 2e-31
 Identities = 56/113 (49%), Positives = 82/113 (72%)
 Frame = +2

Query: 167 RELAGTRRLLWGDHVKEDVFRRWAQGFQFSPDEPSALIQQEGGPCAAIAPVQGFLLKILL 346
           REL   ++LLWGD+V+EDVF+RW+QGF+FS  EPSAL+Q++GGPCA IAPVQ +LLKI++
Sbjct: 95  RELREIKQLLWGDNVREDVFKRWSQGFEFSKVEPSALVQKQGGPCAVIAPVQAYLLKIII 154

Query: 347 SETPGHSFQDLTSEKCNSLLVRAVCTILSQCLAPKYNVAVYRKNESGAETSGS 505
            + PG    +++ +K  +LL++A+C IL  C AP+Y +    +    A  +GS
Sbjct: 155 MDLPGIKLSEISLDKSQNLLIQALCDILKNCRAPRYRIVHLLRRRGNATEAGS 207



 Score = 95.5 bits (227), Expect = 7e-20
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = +2

Query: 521 DEHSSDTIEHFHRRIQIHSFQNLSEVEAFYTRNIRILKDKYGVLLLLYSVILSKGISTVX 700
           D H   + + FH R+    F+N++ V  +Y  N   L   YGVLL +YSV L+KG+  V 
Sbjct: 255 DMHQELSPDEFHERLHTLHFKNIAAVARYYMENYDQLAHTYGVLLFMYSVFLTKGLELVA 314

Query: 701 AXLSELSXPLIHSTYGYGSQGLINLMLTG 787
           A +S+ S PLIHSTYGYG Q LINLMLTG
Sbjct: 315 ADISDTSEPLIHSTYGYGGQSLINLMLTG 343


>AE014298-2788|AAF48903.1|  560|Drosophila melanogaster CG7332-PA
           protein.
          Length = 560

 Score =  134 bits (323), Expect = 2e-31
 Identities = 56/113 (49%), Positives = 82/113 (72%)
 Frame = +2

Query: 167 RELAGTRRLLWGDHVKEDVFRRWAQGFQFSPDEPSALIQQEGGPCAAIAPVQGFLLKILL 346
           REL   ++LLWGD+V+EDVF+RW+QGF+FS  EPSAL+Q++GGPCA IAPVQ +LLKI++
Sbjct: 95  RELREIKQLLWGDNVREDVFKRWSQGFEFSKVEPSALVQKQGGPCAVIAPVQAYLLKIII 154

Query: 347 SETPGHSFQDLTSEKCNSLLVRAVCTILSQCLAPKYNVAVYRKNESGAETSGS 505
            + PG    +++ +K  +LL++A+C IL  C AP+Y +    +    A  +GS
Sbjct: 155 MDLPGIKLSEISLDKSQNLLIQALCDILKNCRAPRYRIVHLLRRRGNATEAGS 207



 Score = 95.5 bits (227), Expect = 7e-20
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = +2

Query: 521 DEHSSDTIEHFHRRIQIHSFQNLSEVEAFYTRNIRILKDKYGVLLLLYSVILSKGISTVX 700
           D H   + + FH R+    F+N++ V  +Y  N   L   YGVLL +YSV L+KG+  V 
Sbjct: 255 DMHQELSPDEFHERLHTLHFKNIAAVARYYMENYDQLAHTYGVLLFMYSVFLTKGLELVA 314

Query: 701 AXLSELSXPLIHSTYGYGSQGLINLMLTG 787
           A +S+ S PLIHSTYGYG Q LINLMLTG
Sbjct: 315 ADISDTSEPLIHSTYGYGGQSLINLMLTG 343


>AY119452-1|AAM50106.1|  456|Drosophila melanogaster AT28654p
           protein.
          Length = 456

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 208 VVPPQQASRACQLALQRHATRTHRFFVTLTITQLQLCVGFNPF 80
           ++PP+   RA    L +   +  ++ + L IT  +L +GF PF
Sbjct: 54  IIPPEIYHRARIYELHKTELQIWKYLIDLIITLCELILGFYPF 96


>AE013599-2389|AAO41367.1|  456|Drosophila melanogaster CG9002-PB,
           isoform B protein.
          Length = 456

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 208 VVPPQQASRACQLALQRHATRTHRFFVTLTITQLQLCVGFNPF 80
           ++PP+   RA    L +   +  ++ + L IT  +L +GF PF
Sbjct: 54  IIPPEIYHRARIYELHKTELQIWKYLIDLIITLCELILGFYPF 96


>AE013599-2388|AAF57924.2|  456|Drosophila melanogaster CG9002-PA,
           isoform A protein.
          Length = 456

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -1

Query: 208 VVPPQQASRACQLALQRHATRTHRFFVTLTITQLQLCVGFNPF 80
           ++PP+   RA    L +   +  ++ + L IT  +L +GF PF
Sbjct: 54  IIPPEIYHRARIYELHKTELQIWKYLIDLIITLCELILGFYPF 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,988,772
Number of Sequences: 53049
Number of extensions: 803743
Number of successful extensions: 2309
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2309
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)