Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_C23
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73972-7|CAA98262.2|  305|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z70780-1|CAA94819.1|  336|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z49911-10|CAA90134.1|  471|Caenorhabditis elegans Hypothetical p...    28   6.6  
Z49909-18|CAA90117.1|  471|Caenorhabditis elegans Hypothetical p...    28   6.6  
U64847-8|AAQ91904.1|  558|Caenorhabditis elegans Acyltransferase...    28   6.6  
U64847-7|AAB04876.1|  718|Caenorhabditis elegans Acyltransferase...    28   6.6  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    28   6.6  
U41510-1|ABP49525.1|  327|Caenorhabditis elegans Hypothetical pr...    28   8.8  
AJ561206-1|CAD99208.1|   71|Caenorhabditis elegans NAS-13 protei...    28   8.8  

>Z73972-7|CAA98262.2|  305|Caenorhabditis elegans Hypothetical
           protein F15H10.5 protein.
          Length = 305

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = +2

Query: 137 TMSASSVALERELAGTRRLLW----GDHVKEDVFRRWAQGFQFSPDEPSALIQQE 289
           +++A S+ALE+    T +++W    G++ +E V    A     +P+  + ++++E
Sbjct: 13  SINAQSLALEKRACNTEKIIWIPDYGEYYEEQVELSLASRTSMNPESMTRILKEE 67


>Z70780-1|CAA94819.1|  336|Caenorhabditis elegans Hypothetical
           protein F46B6.2 protein.
          Length = 336

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = -3

Query: 125 TYYNSTTAVCRFQSFQPRRHIEIY---TSVFHLNYYCNHRLLYI 3
           T+Y++T    R  S+  +  I I+    S FHL Y C    LY+
Sbjct: 167 TFYSATETKIRLYSYHYQVVISIFIIIVSFFHLRYCCTFFFLYL 210


>Z49911-10|CAA90134.1|  471|Caenorhabditis elegans Hypothetical
           protein C14A4.13 protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 203 DHVK-EDVFRRWAQGFQFSPDEPSALIQQEGGPCAAIAPVQGFLLK 337
           D+VK  +V  +     +F+PD P  L  Q+GGPC AI   Q  ++K
Sbjct: 278 DYVKLREVLCQIMTSKKFTPDMP--LDWQKGGPCEAIFKPQAAVVK 321


>Z49909-18|CAA90117.1|  471|Caenorhabditis elegans Hypothetical
           protein C14A4.13 protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 203 DHVK-EDVFRRWAQGFQFSPDEPSALIQQEGGPCAAIAPVQGFLLK 337
           D+VK  +V  +     +F+PD P  L  Q+GGPC AI   Q  ++K
Sbjct: 278 DYVKLREVLCQIMTSKKFTPDMP--LDWQKGGPCEAIFKPQAAVVK 321


>U64847-8|AAQ91904.1|  558|Caenorhabditis elegans
           Acyltransferase-like protein 6,isoform b protein.
          Length = 558

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 161 APRYSHSSFLCYTYYNSTTAVCRF 90
           +P+ SHSSF+    YN  + +CRF
Sbjct: 327 SPKESHSSFITLA-YNKNSVICRF 349


>U64847-7|AAB04876.1|  718|Caenorhabditis elegans
           Acyltransferase-like protein 6,isoform a protein.
          Length = 718

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 161 APRYSHSSFLCYTYYNSTTAVCRF 90
           +P+ SHSSF+    YN  + +CRF
Sbjct: 487 SPKESHSSFITLA-YNKNSVICRF 509


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
           protein 2 protein.
          Length = 1080

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 271 AGFIRTELKTLRPTSENIFFDVVPPQQASRACQLALQRHAT 149
           A + RTEL+TL+   E +   V+P   A +  +  +Q  +T
Sbjct: 242 AVYRRTELETLKDRQEQLLLSVIPAYLADQVSKSIIQSSST 282


>U41510-1|ABP49525.1|  327|Caenorhabditis elegans Hypothetical
           protein ZC449.6 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 203 PPTASVACLPARAPAPRYSHSSFLCYTYYNSTTAVCRFQ 87
           PP   V+CL     +   S SS+LCY  +NS+  + RF+
Sbjct: 256 PPHHFVSCLLV---STFVSLSSYLCYKIFNSSPPMTRFE 291


>AJ561206-1|CAD99208.1|   71|Caenorhabditis elegans NAS-13 protein
           protein.
          Length = 71

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -3

Query: 668 HYITEVEHHICPSIS*CSLCKMPPLLTDFETNVSGFFDGNVQWY 537
           H+ T+    +C      S+ +   +LTD++ N+ G F  N QW+
Sbjct: 24  HFFTDCSK-LCSIFFDPSIPEQETVLTDYDYNMIGHFRENDQWF 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,901,896
Number of Sequences: 27780
Number of extensions: 407600
Number of successful extensions: 1134
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)