Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_C19
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z37139-9|CAA85493.1| 396|Caenorhabditis elegans Hypothetical pr... 62 6e-10
U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine rece... 31 1.4
U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL161712-6|CAC70141.1| 248|Caenorhabditis elegans Hypothetical ... 29 4.2
AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical ... 29 4.2
U53139-5|AAK18933.2| 322|Caenorhabditis elegans Serpentine rece... 28 7.4
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical pr... 28 9.8
U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine rec... 28 9.8
U58751-8|AAB00659.2| 635|Caenorhabditis elegans Hypothetical pr... 28 9.8
U55364-2|AAN84822.2| 317|Caenorhabditis elegans Hypothetical pr... 28 9.8
U41559-3|AAC24262.1| 334|Caenorhabditis elegans Hypothetical pr... 28 9.8
AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein. 28 9.8
AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like ... 28 9.8
>Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical
protein C09G5.2 protein.
Length = 476
Score = 80.2 bits (189), Expect = 2e-15
Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Frame = +3
Query: 207 DDIITNFDIKETCKWIERKKFAKVCLQFPDDLLEVSCKVYKEIKDRIEVD----LYIMGD 374
+DI + F+I T +WI++ ++ LQFPD LL S KV K I+ R + +++ D
Sbjct: 36 NDIHSFFEIDATSEWIKQGNHQRIALQFPDSLLPYSEKVTKLIESRFRSESAKKTFVLAD 95
Query: 375 TSYASCCIDSVAAMHVQANGIVHYGHKCFS-KTD-IPVYMVLPKEKLDFDAAINTLKEKY 548
TSY SCC+D VAA H +VH+G C S TD I V VL + D +
Sbjct: 96 TSYRSCCVDEVAAAHADCTALVHFGEACHSAPTDKIDVKYVLGSMPIFIDQFRMEFQNVA 155
Query: 549 DSDDNMKLCLFYGAEFEHCNENI 617
D + L + F H E +
Sbjct: 156 DQLTAEHIVLLMDSCFSHEQEKV 178
>Z37139-9|CAA85493.1| 396|Caenorhabditis elegans Hypothetical
protein C14B1.5 protein.
Length = 396
Score = 61.7 bits (143), Expect = 6e-10
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Frame = +3
Query: 225 FDIKETCKWIERKKFAKVCLQFPDDLLEVSCKVYKEIKDRIEVDLYIMGDTSYASCCIDS 404
F++ +T I + V LQFP+ L+ +C + ++ D IMGD +Y +CC+D
Sbjct: 34 FEVPKTIWKIRSTESKYVALQFPEGLIMYACVIADILEKYTGCDTVIMGDVTYGACCVDD 93
Query: 405 VAAMHVQANGIVHYGHKC---FSKTD-IPVYMVLPKEKLDFDAAINTLKEKY 548
A + + +VHYGH C TD I + V ++ I+ +KE +
Sbjct: 94 YTAKSMGCDLLVHYGHSCLVPIQNTDGIAMLYVFVNIHINLSHLIDCVKENF 145
>U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 7 protein.
Length = 339
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -1
Query: 215 YIVITFSFIYCYLTCYTYFVFCSKIPHFIFDNSFSTYDKKVLTNCLFYLXXLQSIPKXYN 36
+I++ F F + + Y +F + P F+ D F YD + L +L + K +
Sbjct: 241 FIIVAFFFQAAFQSFYAFFRYTDWYPRFLVDFQFIIYDVMTVGYPLIFL----NFAKEFR 296
Query: 35 XLNYIFLSS 9
N++FL S
Sbjct: 297 --NHVFLKS 303
>U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical
protein T10E10.3 protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -1
Query: 266 LFSFDPFAC-FLYIKIGDYIVITFSFIYCYLTCYTYFVFCSKIPHFIFDNSFSTYDKKVL 90
+ S P AC ++YI + ++ + ++Y + T V CSK+ +FI S + +K +
Sbjct: 278 IVSHIPSACLYVYINLFHNVLYSTRWMYTSVQVSTTVVTCSKVANFILFCMSSKHFRKEM 337
Query: 89 TNCLFYL 69
L +L
Sbjct: 338 KKKLCFL 344
>AL161712-6|CAC70141.1| 248|Caenorhabditis elegans Hypothetical
protein Y66D12A.9 protein.
Length = 248
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 435 IVHYGHKCFSKTDIPVYMVLPKEKLDFDAAINTLKEKYD 551
+V Y K F++ + V PK+ ++FDA + + K YD
Sbjct: 13 LVEYKQKLFAEAERLVKEEFPKKVIEFDALLKSPKLSYD 51
>AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical
protein T05H4.9 protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -1
Query: 185 CYLT-CYTY-FVFCSKIPHFIFDNSFSTYDKKVLTNCLFYLXXLQSI 51
CY CY F+FC++ +I + F +K + NC F Q I
Sbjct: 492 CYFAGCYNLAFIFCARCKEYICFSHFIVDEKHLCPNCRFIDKICQKI 538
>U53139-5|AAK18933.2| 322|Caenorhabditis elegans Serpentine
receptor, class xa protein4 protein.
Length = 322
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -1
Query: 224 IGDYIVITFSFIYCYLTCYTYFVFCS--KIPHFIFDNSFSTYDKKVL 90
I Y + F+ C +TC+ + CS K P + D + Y ++
Sbjct: 95 IATYCYLIAIFLNCLMTCHRVSILCSPAKAPQWFTDIKLALYSMSIM 141
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/76 (21%), Positives = 34/76 (44%)
Frame = +3
Query: 207 DDIITNFDIKETCKWIERKKFAKVCLQFPDDLLEVSCKVYKEIKDRIEVDLYIMGDTSYA 386
D I + +++ R + ++ + DLLE EIK+R + +Y+ TS
Sbjct: 127 DHIFEHMAASHNQEYLVRASYLEIYQEELRDLLEAESNKKLEIKERPDGGVYVKDLTSKL 186
Query: 387 SCCIDSVAAMHVQANG 434
+ + + + ++ NG
Sbjct: 187 TRTVGEIHEVMIRGNG 202
>Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical
protein F20C5.2a protein.
Length = 782
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/76 (21%), Positives = 34/76 (44%)
Frame = +3
Query: 207 DDIITNFDIKETCKWIERKKFAKVCLQFPDDLLEVSCKVYKEIKDRIEVDLYIMGDTSYA 386
D I + +++ R + ++ + DLLE EIK+R + +Y+ TS
Sbjct: 127 DHIFEHMAASHNQEYLVRASYLEIYQEELRDLLEAESNKKLEIKERPDGGVYVKDLTSKL 186
Query: 387 SCCIDSVAAMHVQANG 434
+ + + + ++ NG
Sbjct: 187 TRTVGEIHEVMIRGNG 202
>U97008-16|AAB52300.1| 303|Caenorhabditis elegans Serpentine
receptor, class sx protein24 protein.
Length = 303
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = -1
Query: 236 LYIKIGDYIVITFSFIYCYLTCYTYFVF---CSKIPHFIFDNSFSTYDKKVLTNCLFYLX 66
L+I I VI + Y L+ Y++ C+ I + F Y +V+TNCL
Sbjct: 98 LFIGIDRVYVIVYPGKYAKLSINYYYLMVTLCALISLLVTFCKFVFYSDEVVTNCLL-ST 156
Query: 65 XLQSIP-KXYNXLNY 24
L IP K + +N+
Sbjct: 157 ALHGIPFKIWQFMNF 171
>U58751-8|AAB00659.2| 635|Caenorhabditis elegans Hypothetical
protein C07G1.2 protein.
Length = 635
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/80 (23%), Positives = 31/80 (38%)
Frame = -3
Query: 690 ISQAYLLIQCDIYNSLDIFETIFG*YFHCSVQILHHKRGITSCCHQNHIFLSMYLLLHQN 511
I Q I+ I+ L + G +F + H K G +C + FLS + Q
Sbjct: 14 IFQCAKCIELKIFEDLLEVRSQSGLFFPLCSKSFHQKYGEQACASISSTFLSYSTVSLQQ 73
Query: 510 PVFLLAIPCKLVYQFLKSIC 451
+ + + + FL S C
Sbjct: 74 YTYSVGCTTSVCFTFLSSFC 93
>U55364-2|AAN84822.2| 317|Caenorhabditis elegans Hypothetical
protein F21C10.9 protein.
Length = 317
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +3
Query: 459 FSKTDIPVYMVLPKEKLDFDAAINTLKEKYDSDDNMKLCLFYGAEFE---HCNENITRKW 629
+ K D + + E D D I+ + + D+N K+C Y + + ++
Sbjct: 190 YKKLDYTIGIAFFNESGDIDGVISAVPTGHQEDNNFKICHLYANSSNIAFYTMKVLSEVM 249
Query: 630 FQKYPKSYICHIELEDKPE 686
+ YP++ + L D PE
Sbjct: 250 LKTYPEATLI-FHLVDTPE 267
>U41559-3|AAC24262.1| 334|Caenorhabditis elegans Hypothetical
protein C26B2.6 protein.
Length = 334
Score = 27.9 bits (59), Expect = 9.8
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Frame = +3
Query: 300 LLEVS--CKVYKEIKDRIEVDLYIMGDTSYASCCIDSVAAMHVQANGIVHYGHKCF--SK 467
LLE S C + + V+ I+ Y S C S A G+ H+GH+CF
Sbjct: 19 LLETSSGCDSFDTLIGGALVNSSIVLIDEYRSRCYGSYLIRSFLAEGL-HHGHRCFIADP 77
Query: 468 TDIPVYM-VLPKEKLDFDAAINTLKEKY--DSDDNMKLCLFYG 587
T+ P + ++P + D + +++++MK+ YG
Sbjct: 78 TEDPKEINLIPSRRTSTDMQNQEIPNSLPAENENSMKIAWRYG 120
>AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein.
Length = 782
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/76 (21%), Positives = 34/76 (44%)
Frame = +3
Query: 207 DDIITNFDIKETCKWIERKKFAKVCLQFPDDLLEVSCKVYKEIKDRIEVDLYIMGDTSYA 386
D I + +++ R + ++ + DLLE EIK+R + +Y+ TS
Sbjct: 127 DHIFEHMAASHNQEYLVRASYLEIYQEELRDLLEAESNKKLEIKERPDGGVYVKDLTSKL 186
Query: 387 SCCIDSVAAMHVQANG 434
+ + + + ++ NG
Sbjct: 187 TRTVGEIHEVMIRGNG 202
>AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like
protein (klp-11) protein.
Length = 607
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/76 (21%), Positives = 34/76 (44%)
Frame = +3
Query: 207 DDIITNFDIKETCKWIERKKFAKVCLQFPDDLLEVSCKVYKEIKDRIEVDLYIMGDTSYA 386
D I + +++ R + ++ + DLLE EIK+R + +Y+ TS
Sbjct: 90 DHIFEHMAASHNQEYLVRASYLEIYQEELRDLLEAESNKKLEIKERPDGGVYVKDLTSKL 149
Query: 387 SCCIDSVAAMHVQANG 434
+ + + + ++ NG
Sbjct: 150 TRTVGEIHEVMIRGNG 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,168,665
Number of Sequences: 27780
Number of extensions: 457849
Number of successful extensions: 1464
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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