Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_C15
(764 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0178 + 13127669-13127741,13127831-13128173,13128308-131283... 36 0.027
03_04_0125 - 17487746-17487847,17488025-17488555,17488834-174891... 31 0.76
02_02_0453 + 10420585-10421661,10422015-10422146,10422232-104224... 31 0.76
01_01_0095 + 733307-734060,734779-734802,735029-736098 31 0.76
01_05_0174 + 18919759-18920265,18920381-18920443,18921060-189217... 31 1.0
11_06_0115 + 20288220-20288303,20289223-20289706,20290160-202903... 31 1.3
01_05_0472 + 22539803-22540121,22540610-22540635 31 1.3
01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944... 30 1.8
05_01_0289 + 2265440-2266229,2267148-2267236 30 2.3
04_03_0385 + 15239611-15239988 30 2.3
04_03_0338 + 14623636-14624013 30 2.3
02_05_0634 + 30513920-30514136,30514674-30514717,30515547-305155... 30 2.3
08_02_0704 + 20197529-20197601,20197720-20198062,20198194-201982... 29 4.1
02_05_1245 + 35223504-35224778 29 4.1
02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715 29 4.1
02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033 29 4.1
09_02_0207 - 5793848-5794276,5794523-5794645,5794742-5795250,579... 29 5.4
03_06_0322 + 33114988-33115130,33116972-33117024,33117432-331177... 29 5.4
03_02_0283 - 7078754-7078856,7079358-7079431,7079995-7080090,708... 29 5.4
07_01_0623 + 4638952-4639024,4640422-4640439,4641312-4641660,464... 28 7.1
01_01_0768 - 5935319-5935417,5935536-5935583,5935721-5935780,593... 28 7.1
11_04_0050 - 12819929-12820468,12820606-12820824,12820900-12821118 28 9.4
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 28 9.4
02_05_1019 - 33549576-33550247,33550885-33551121,33551206-335513... 28 9.4
>09_03_0178 +
13127669-13127741,13127831-13128173,13128308-13128376,
13129706-13129844,13130010-13130021
Length = 211
Score = 36.3 bits (80), Expect = 0.027
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 145 IKMAANMYRVGDCVYFETSST--SPYQIRRIEELNKTTSGNVEAKVLCFYR 291
IK + RVGDCV S T +PY + R+E L G+V +V +YR
Sbjct: 16 IKGTTKIVRVGDCVLMRASDTEKAPY-VGRVERLETDGRGSVRVRVRWYYR 65
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +1
Query: 502 KQRHQAKHRELFLSRHVETLPATHIRGKCTV 594
+Q H AK ELFLS H +T A I GKC V
Sbjct: 74 RQFHGAK--ELFLSDHFDTQSAHTIEGKCVV 102
>03_04_0125 -
17487746-17487847,17488025-17488555,17488834-17489102,
17489161-17489257,17491060-17491161,17491235-17491367,
17491589-17491681,17491756-17491844,17493578-17493700,
17496908-17497004,17497440-17497639
Length = 611
Score = 31.5 bits (68), Expect = 0.76
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +1
Query: 508 RHQAKHRELFLSRHVETLPATHIRGKCTVTLLNETESLLSYLNKDDAFFYCLVFDPSQKT 687
RH H FL +E + C+ + N +E +N+DDA + +FDP +
Sbjct: 145 RHGGDHLNFFLEVELELWIIFYYSFGCSTLIPNHSE-----INEDDALVFLKLFDPEKAQ 199
Query: 688 LLADKGEIRVGSRYXTEVLI 747
L EI +R+ + VL+
Sbjct: 200 LQFPDSEI---NRFISFVLV 216
>02_02_0453 +
10420585-10421661,10422015-10422146,10422232-10422456,
10422555-10422680,10422777-10422839,10423214-10423296,
10424078-10424309,10424421-10424489,10424532-10424731,
10424819-10424894,10425015-10425081,10425194-10425471,
10425600-10425787,10426235-10426391,10426496-10426741
Length = 1072
Score = 31.5 bits (68), Expect = 0.76
Identities = 17/54 (31%), Positives = 20/54 (37%)
Frame = -1
Query: 572 CVAGNVSTCLDRNSSRCFAWCRCFGARPSVPGNSVDSSSIAANAGSRTACAACS 411
C V +C S CF C CFG P P S S+ +A A S
Sbjct: 3 CSPSKVCSCPHYKGSLCFCDCGCFGQTPDSPRESRGKSNRVRGKTDSSASDASS 56
>01_01_0095 + 733307-734060,734779-734802,735029-736098
Length = 615
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -1
Query: 518 AWCRCFGARPSVPGNSVDSSSIAANAGSRTACA--ACSSPTGVLRHIFL 378
+WC G P + ++SS+ ++++ +CA ACS P +L H FL
Sbjct: 17 SWCSDSGPEIRFP-HQLESSNSSSSSSCSASCARLACSGPDTILHHPFL 64
>01_05_0174 +
18919759-18920265,18920381-18920443,18921060-18921761,
18922934-18923068,18923391-18923474,18924095-18924151,
18924290-18924376,18924963-18925205
Length = 625
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 526 RELFLSRHVETLPATHIRGKCTVTLLNETESLLSYLNKDDAFFYCLVFDPSQKTL--LAD 699
RELF S H++ +PA + KC V + + + + S + F V+D K L L D
Sbjct: 226 RELFYSFHIDDVPAESVMHKCVVHFIPQHKKIPS-RKEHPGFIVQKVYDTVAKKLWNLTD 284
Query: 700 K 702
K
Sbjct: 285 K 285
>11_06_0115 +
20288220-20288303,20289223-20289706,20290160-20290393,
20291811-20292770,20292931-20293404,20293406-20294664
Length = 1164
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = -1
Query: 500 GARPSVPGN-----SVDSSSIAANAGSRTACAACSSPTGVLRHIFLSFIATGESSDWA 342
G PS GN +D S + G A + S G LR++ LSFI +SDWA
Sbjct: 425 GTVPSQLGNLSKLQHLDLSDLEGKEGMHLADMSWVSRLGSLRYLDLSFINLSAASDWA 482
>01_05_0472 + 22539803-22540121,22540610-22540635
Length = 114
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 518 AWCRC--FGAR--PSVPGNSVDSSSIAANAGSRTACAACSSPTGVL 393
AW RC +G R VPGNS + + A AG + +P GVL
Sbjct: 16 AWQRCVVYGLRRLDDVPGNSDEMACDVAGAGDALRAPSSGAPVGVL 61
>01_05_0687 + 24288648-24292746,24293737-24293844,24294333-24294442,
24295208-24295282
Length = 1463
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Frame = -2
Query: 565 PATFPRAWTGTARGVSLGAAASAPGRLYLAIR*I------PPPSPLTLGRELLVPPVPRQ 404
P T P A A ++ AA P L L + PPP P G E L P+PR
Sbjct: 1024 PQTVPDAAAADALAATVEEAAGPPPALELEAMDVDMDAIHPPPLPFDSGVESLQKPLPRA 1083
Query: 403 PA 398
P+
Sbjct: 1084 PS 1085
>05_01_0289 + 2265440-2266229,2267148-2267236
Length = 292
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 530 SRCFAWCRCFGARPSVPGNSVDSSSIAANAGSRTACAACSSPT 402
S C +C+G + +S S ++ A S +A AACS P+
Sbjct: 220 SDCTVEIQCYGLSATSSPTHTNSGSCSSGAASPSAAAACSLPS 262
>04_03_0385 + 15239611-15239988
Length = 125
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 518 AWCRC--FGARP--SVPGNSVDSSSIAANAGSRTACAACSSPTGVL 393
AW RC +G R VPGNS + + A AG + +P GVL
Sbjct: 5 AWQRCVIYGLRRLGDVPGNSDEMAYDVAGAGDALRAPSSGTPAGVL 50
>04_03_0338 + 14623636-14624013
Length = 125
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 518 AWCRC--FGARP--SVPGNSVDSSSIAANAGSRTACAACSSPTGVL 393
AW RC +G R VPGNS + + A AG + +P GVL
Sbjct: 5 AWQRCVIYGLRRLGDVPGNSDEMAYDVAGAGDALRAPSSGTPAGVL 50
>02_05_0634 +
30513920-30514136,30514674-30514717,30515547-30515595,
30515663-30515835
Length = 160
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = -1
Query: 518 AWCRC--FGARP--SVPGNSVDSSSIAANAGSRTACAACSSPTGVL 393
AW RC +G R VPGNS + + A AG + +P G+L
Sbjct: 16 AWQRCIVYGLRRLNDVPGNSDEMACDVAGAGDALRAPSSDAPAGIL 61
>08_02_0704 +
20197529-20197601,20197720-20198062,20198194-20198262,
20199341-20199479,20199727-20199786
Length = 227
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +1
Query: 502 KQRHQAKHRELFLSRHVETLPATHIRGKCTV 594
+Q H AK ELFLS H + A I GKC V
Sbjct: 74 RQFHGAK--ELFLSDHFDMQSANTIEGKCVV 102
>02_05_1245 + 35223504-35224778
Length = 424
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 517 LGAAASAPGRLYLAIR*IPPPSPLT 443
LGAAAS G L+LA +P SPL+
Sbjct: 172 LGAAASPDGSLFLAYELLPDASPLS 196
>02_05_0707 + 31096628-31096630,31097037-31097405,31097477-31101715
Length = 1536
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 151 MAANMYRVGDCVYFETSSTSPYQIRRIEELNKTTSGNVEAKVLCFYRRRDL 303
M +RVGDC F P+ I I + K G + +V YR D+
Sbjct: 1 MDGREFRVGDCALFRAVDVPPF-IGLIRWIEKQEEGYPKLRVSWLYRPADI 50
>02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033
Length = 1614
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 166 YRVGDCVYFETSSTSPYQIRRIEELNKTTSGNVEAKVLCFYRRRDL 303
+RVGDC F+ P+ I I + K G + +V YR D+
Sbjct: 34 FRVGDCALFQAVEVPPF-IGLIRWIEKKEEGFPKLRVSWLYRPADI 78
>09_02_0207 -
5793848-5794276,5794523-5794645,5794742-5795250,
5795543-5795648,5795798-5795959,5796094-5796144,
5796229-5796394,5796624-5797093
Length = 671
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 280 CFYRRRDLPNPLIQLADKHQMAQSEDS 360
C Y RD NP Q A KH + Q E+S
Sbjct: 41 CVYLARDAANPAKQYALKHVVIQDEES 67
>03_06_0322 +
33114988-33115130,33116972-33117024,33117432-33117780,
33118450-33118518,33119015-33119150,33120048-33120080
Length = 260
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 526 RELFLSRHVETLPATHIRGKCTVTLLNETESLLSYLNKDDAFFYC 660
+E+FLS H ++ A I GKC V + L S +D F+C
Sbjct: 123 KEVFLSDHYDSQSADTIEGKCYVHTFRDYTKLRSVSAED---FFC 164
>03_02_0283 -
7078754-7078856,7079358-7079431,7079995-7080090,
7080145-7080270,7080856-7080939,7081458-7081506,
7081630-7081688,7081908-7081925,7082141-7082620
Length = 362
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/62 (40%), Positives = 28/62 (45%)
Frame = -2
Query: 571 ASPATFPRAWTGTARGVSLGAAASAPGRLYLAIR*IPPPSPLTLGRELLVPPVPRQPAF* 392
ASP PRA+ L AAAS+P R + PPP P T GR L P A
Sbjct: 22 ASPQPLPRAF--------LAAAASSPRRAAASPAPAPPPPPFT-GRPLNPNPSHHATAAH 72
Query: 391 GI 386
GI
Sbjct: 73 GI 74
>07_01_0623 +
4638952-4639024,4640422-4640439,4641312-4641660,
4643917-4643985,4645587-4645722,4646835-4646870
Length = 226
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +1
Query: 526 RELFLSRHVETLPATHIRGKCTVTLLNETESLLSYLNKDDAFFYC 660
+E+FLS H + A I GKC V L S +N +D F+C
Sbjct: 88 KEVFLSDHYDVQSADTIEGKCNVHSFRSYTKLDS-VNAED--FFC 129
>01_01_0768 -
5935319-5935417,5935536-5935583,5935721-5935780,
5935884-5935996,5936082-5936154,5936895-5936939,
5937020-5937133,5937227-5937253,5937963-5938247
Length = 287
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -1
Query: 461 SSIAANAGSRTACAACSSPTGVLRHIFLSF 372
+ I AN G C C P VLR F+ F
Sbjct: 149 ADIFANCGQVVDCRICGDPHSVLRFAFIEF 178
>11_04_0050 - 12819929-12820468,12820606-12820824,12820900-12821118
Length = 325
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +2
Query: 350 QKTHRSR*NSRKYALKRRLARNRRHKQFSTQR*RRWRRNLPNCQVQTAWRRSSGTKRNTA 529
+K + +R K LK+ L R+ R + +R W+ LP C+ + +
Sbjct: 258 KKEYGARLRKTKAELKK-LVRSERGGHGNRRRCCSWKIKLPKCRFPKCCAFKLPSPSSCC 316
Query: 530 SCSCPGTWKRC 562
SCSC ++RC
Sbjct: 317 SCSC---FRRC 324
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 754 FNKLVLQXDIYFQL*FLPYLLIKSFVKDQILNNKKMRHPY 635
FN L Q +Y L F P L+ SF+ Q LN+ + H Y
Sbjct: 700 FNTLFAQ--LYTDLYFSPLALVPSFISFQRLNSPEALHYY 737
>02_05_1019 -
33549576-33550247,33550885-33551121,33551206-33551317,
33551998-33552215,33553084-33553194
Length = 449
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 461 RNLPNCQVQTAWRRSSGTKRNTASCSCPGTWKRCRRRTFAASAPSRYS 604
R L + ++Q +R S R ASC W+R +RR A R S
Sbjct: 346 RRLHSKRLQHTFRYYSHHWRTWASCFIQAAWRRYKRRKMARDLSMRES 393
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,604,129
Number of Sequences: 37544
Number of extensions: 389401
Number of successful extensions: 1456
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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