Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_C15
(764 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 relate... 94 9e-20
AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 94 9e-20
AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 94 9e-20
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 94 9e-20
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 44 9e-05
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 44 9e-05
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 44 9e-05
Z81143-7|CAB03517.2| 383|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF067945-12|AAC17680.1| 840|Caenorhabditis elegans Patched rela... 28 8.4
>AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 related
protein 1, isoform c protein.
Length = 756
Score = 94.3 bits (224), Expect = 9e-20
Identities = 44/87 (50%), Positives = 57/87 (65%)
Frame = +1
Query: 481 GTDGLAPKQRHQAKHRELFLSRHVETLPATHIRGKCTVTLLNETESLLSYLNKDDAFFYC 660
G D L P QR + + E+F++R E LPA IRGKC V LL + E +YL DD F++
Sbjct: 205 GVDKLTPDQRLKLRQHEIFMTRQSEILPAAAIRGKCRVVLLGDGEEAQNYLPLDDTFYHS 264
Query: 661 LVFDPSQKTLLADKGEIRVGSRYXTEV 741
LV+DP+ +TLLADKG IRVG +Y V
Sbjct: 265 LVYDPNAQTLLADKGAIRVGEKYQAVV 291
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/60 (55%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Frame = +1
Query: 166 YRVGDCVYFE-TSST-SPYQIRRIEELNKTTSGNVEAKVLCFYRRRDLPNPLIQLADKHQ 339
Y VGD VYF+ TS+T +PYQIR+IEEL KT G V+A+ + + RRRD+P L+++AD+ Q
Sbjct: 15 YAVGDFVYFDDTSATDAPYQIRKIEELVKTEKGGVDARCVVYLRRRDIPQHLLKIADQAQ 74
>AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform d protein.
Length = 870
Score = 94.3 bits (224), Expect = 9e-20
Identities = 44/87 (50%), Positives = 57/87 (65%)
Frame = +1
Query: 481 GTDGLAPKQRHQAKHRELFLSRHVETLPATHIRGKCTVTLLNETESLLSYLNKDDAFFYC 660
G D L P QR + + E+F++R E LPA IRGKC V LL + E +YL DD F++
Sbjct: 205 GVDKLTPDQRLKLRQHEIFMTRQSEILPAAAIRGKCRVVLLGDGEEAQNYLPLDDTFYHS 264
Query: 661 LVFDPSQKTLLADKGEIRVGSRYXTEV 741
LV+DP+ +TLLADKG IRVG +Y V
Sbjct: 265 LVYDPNAQTLLADKGAIRVGEKYQAVV 291
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/60 (55%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Frame = +1
Query: 166 YRVGDCVYFE-TSST-SPYQIRRIEELNKTTSGNVEAKVLCFYRRRDLPNPLIQLADKHQ 339
Y VGD VYF+ TS+T +PYQIR+IEEL KT G V+A+ + + RRRD+P L+++AD+ Q
Sbjct: 15 YAVGDFVYFDDTSATDAPYQIRKIEELVKTEKGGVDARCVVYLRRRDIPQHLLKIADQAQ 74
>AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform b protein.
Length = 870
Score = 94.3 bits (224), Expect = 9e-20
Identities = 44/87 (50%), Positives = 57/87 (65%)
Frame = +1
Query: 481 GTDGLAPKQRHQAKHRELFLSRHVETLPATHIRGKCTVTLLNETESLLSYLNKDDAFFYC 660
G D L P QR + + E+F++R E LPA IRGKC V LL + E +YL DD F++
Sbjct: 205 GVDKLTPDQRLKLRQHEIFMTRQSEILPAAAIRGKCRVVLLGDGEEAQNYLPLDDTFYHS 264
Query: 661 LVFDPSQKTLLADKGEIRVGSRYXTEV 741
LV+DP+ +TLLADKG IRVG +Y V
Sbjct: 265 LVYDPNAQTLLADKGAIRVGEKYQAVV 291
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/60 (55%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Frame = +1
Query: 166 YRVGDCVYFE-TSST-SPYQIRRIEELNKTTSGNVEAKVLCFYRRRDLPNPLIQLADKHQ 339
Y VGD VYF+ TS+T +PYQIR+IEEL KT G V+A+ + + RRRD+P L+++AD+ Q
Sbjct: 15 YAVGDFVYFDDTSATDAPYQIRKIEELVKTEKGGVDARCVVYLRRRDIPQHLLKIADQAQ 74
>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
protein 1, isoform a protein.
Length = 1022
Score = 94.3 bits (224), Expect = 9e-20
Identities = 44/87 (50%), Positives = 57/87 (65%)
Frame = +1
Query: 481 GTDGLAPKQRHQAKHRELFLSRHVETLPATHIRGKCTVTLLNETESLLSYLNKDDAFFYC 660
G D L P QR + + E+F++R E LPA IRGKC V LL + E +YL DD F++
Sbjct: 205 GVDKLTPDQRLKLRQHEIFMTRQSEILPAAAIRGKCRVVLLGDGEEAQNYLPLDDTFYHS 264
Query: 661 LVFDPSQKTLLADKGEIRVGSRYXTEV 741
LV+DP+ +TLLADKG IRVG +Y V
Sbjct: 265 LVYDPNAQTLLADKGAIRVGEKYQAVV 291
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/60 (55%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Frame = +1
Query: 166 YRVGDCVYFE-TSST-SPYQIRRIEELNKTTSGNVEAKVLCFYRRRDLPNPLIQLADKHQ 339
Y VGD VYF+ TS+T +PYQIR+IEEL KT G V+A+ + + RRRD+P L+++AD+ Q
Sbjct: 15 YAVGDFVYFDDTSATDAPYQIRKIEELVKTEKGGVDARCVVYLRRRDIPQHLLKIADQAQ 74
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 44.4 bits (100), Expect = 9e-05
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +1
Query: 454 MEEESTELPGTDGLAPKQRHQAKHRELFLSRHVETLPATHIRGKCTVTLLNE---TESLL 624
M++E EL L P Q+ +RELF S T P + +RGKC V + + ++
Sbjct: 142 MKQERAELEINPHLCP----QSLNRELFNSELQITQPVSCLRGKCIVEYVKDVRHARTVA 197
Query: 625 SYLNKDDAFFYCLVFDPSQKTLLADKGEIRVGSRY 729
+ +D FF+CL ++ L + IRVG+ +
Sbjct: 198 DFSLDNDTFFFCLHYNQDSTKLASTHYAIRVGTSF 232
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +1
Query: 163 MYRVGDCVYFETSSTSPYQIRRIEELNKTTSGNVEAKVLCFYRRRDLPNPLIQLADKHQM 342
+YR+ D V+ E S PY I I T +V K+ ++R D+P + L K +
Sbjct: 88 LYRLRDSVFVEVSQNEPYVIAAICGFKYTKRDHVVVKLTRYFRADDIPEISLNLM-KQER 146
Query: 343 AQSEDSP 363
A+ E +P
Sbjct: 147 AELEINP 153
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 44.4 bits (100), Expect = 9e-05
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +1
Query: 454 MEEESTELPGTDGLAPKQRHQAKHRELFLSRHVETLPATHIRGKCTVTLLNE---TESLL 624
M++E EL L P Q+ +RELF S T P + +RGKC V + + ++
Sbjct: 142 MKQERAELEINPHLCP----QSLNRELFNSELQITQPVSCLRGKCIVEYVKDVRHARTVA 197
Query: 625 SYLNKDDAFFYCLVFDPSQKTLLADKGEIRVGSRY 729
+ +D FF+CL ++ L + IRVG+ +
Sbjct: 198 DFSLDNDTFFFCLHYNQDSTKLASTHYAIRVGTSF 232
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +1
Query: 163 MYRVGDCVYFETSSTSPYQIRRIEELNKTTSGNVEAKVLCFYRRRDLPNPLIQLADKHQM 342
+YR+ D V+ E S PY I I T +V K+ ++R D+P + L K +
Sbjct: 88 LYRLRDSVFVEVSQNEPYVIAAICGFKYTKRDHVVVKLTRYFRADDIPEISLNLM-KQER 146
Query: 343 AQSEDSP 363
A+ E +P
Sbjct: 147 AELEINP 153
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 44.4 bits (100), Expect = 9e-05
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = +1
Query: 454 MEEESTELPGTDGLAPKQRHQAKHRELFLSRHVETLPATHIRGKCTVTLLNE---TESLL 624
M++E EL L P Q+ +RELF S T P + +RGKC V + + ++
Sbjct: 142 MKQERAELEINPHLCP----QSLNRELFNSELQITQPVSCLRGKCIVEYVKDVRHARTVA 197
Query: 625 SYLNKDDAFFYCLVFDPSQKTLLADKGEIRVGSRY 729
+ +D FF+CL ++ L + IRVG+ +
Sbjct: 198 DFSLDNDTFFFCLHYNQDSTKLASTHYAIRVGTSF 232
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +1
Query: 163 MYRVGDCVYFETSSTSPYQIRRIEELNKTTSGNVEAKVLCFYRRRDLPNPLIQLADKHQM 342
+YR+ D V+ E S PY I I T +V K+ ++R D+P + L K +
Sbjct: 88 LYRLRDSVFVEVSQNEPYVIAAICGFKYTKRDHVVVKLTRYFRADDIPEISLNLM-KQER 146
Query: 343 AQSEDSP 363
A+ E +P
Sbjct: 147 AELEINP 153
>Z81143-7|CAB03517.2| 383|Caenorhabditis elegans Hypothetical
protein ZK265.5 protein.
Length = 383
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 539 RNSSRCFAWCRCFGARPSVPGNSVDSSSIAANAGSRTACAACSSPTGVL-RHIFLSFI 369
R S +C C FG R SV N DS IAAN ++P G+L IF + +
Sbjct: 101 RESIKCNDECHHFG-RCSVAKNMFDSIFIAANMRYHYMYFVITTPVGILTERIFATIL 157
>AF067945-12|AAC17680.1| 840|Caenorhabditis elegans Patched related
family protein 15 protein.
Length = 840
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 6/37 (16%)
Frame = +2
Query: 509 GTKRNTASCSCPGTWKRCRRRTFA------ASAPSRY 601
G KR A C WKRC R A A +P+RY
Sbjct: 420 GAKREAAGYHCVFVWKRCDREEIAKAKNENAISPTRY 456
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,594,888
Number of Sequences: 27780
Number of extensions: 310788
Number of successful extensions: 963
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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