Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_C13
         (824 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    45   3e-06
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   3.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   6.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   8.6  

>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 44.8 bits (101), Expect = 3e-06
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +1

Query: 199 YLELGCTPIPSVDNTTICPDAFKCPDL-HPDPTMCYYRGASYTDRSPL-PQNLIKNPCSQ 372
           Y ELGC PI  ++    CP  ++CP+L   D   CY+ G  Y   + L P     + CS 
Sbjct: 35  YAELGCKPI--LEEGQCCPKRYQCPELTDRDGNKCYFNGNIYPAGAKLAPTEQEIHSCSP 92

Query: 373 ACSC 384
           AC C
Sbjct: 93  ACFC 96



 Score = 24.2 bits (50), Expect = 4.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 715 CAPIFAGNGRXCPIGFECPSTTTK 786
           C PI    G+ CP  ++CP  T +
Sbjct: 40  CKPILE-EGQCCPKRYQCPELTDR 62


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
 Frame = +2

Query: 407 SSIAPQSTAWSPSTPTSRSA--SKRTNWT-HVAAQQMSAART 523
           S+++P S++ SPS+P+S ++  S+ +N +   +A   SAA T
Sbjct: 63  SALSPSSSSASPSSPSSVASPNSRASNMSPESSASDQSAAYT 104


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -1

Query: 566  YVLPSTWQVFNVAIASLPQTFAVLQHESNSYVLTHSWRSESKDSTQSTAAQS 411
            Y+      VF+  IASL +  AVL  E    V+  +W    +   + +AA +
Sbjct: 1639 YIKNQVRDVFHAPIASLVKGAAVLTEEQFVEVIPIAWELLLETDQEVSAASA 1690


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +2

Query: 428  TAWSPSTPTSRSASKRTNWTHVAAQQMSA 514
            T W          S+ T WTH   + +SA
Sbjct: 942  TMWQSQWDAEADTSRYTRWTHRIIRDISA 970


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 886,802
Number of Sequences: 2352
Number of extensions: 19394
Number of successful extensions: 49
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)