Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_C11
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0038 - 282431-283954                                             32   0.71 
02_03_0205 - 16411707-16412759,16413077-16413256,16413960-164144...    29   5.0  
01_01_0441 - 3305319-3305894                                           29   5.0  
09_04_0020 + 13837257-13837281,13837364-13837550,13837655-138377...    28   8.7  

>08_01_0038 - 282431-283954
          Length = 507

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 26/96 (27%), Positives = 43/96 (44%)
 Frame = +1

Query: 403 TLKMDNLYTKGELLQVHTKNYDVFEGRFYSMAQDKTKISLYDVKEIPHGDANDGVLHYYD 582
           TL + +  T   +L+ H +   VF  R Y+   D       DV   P+GD        Y 
Sbjct: 82  TLVVSSARTAQAILRTHDR---VFASRPYNTIADILLYGATDVAFSPYGD--------YW 130

Query: 583 SEIREVVKLQDSTEKKVLKISQTKYEEILKISKKYI 690
            +I+++V +   T KKV    QT+ +E+  +  K +
Sbjct: 131 RQIKKIVTMNLLTIKKVHSYGQTRQQEVRLVMAKIV 166


>02_03_0205 -
           16411707-16412759,16413077-16413256,16413960-16414498,
           16414798-16414825
          Length = 599

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 697 NQVDKSFHEAVDDLNQQDFVAVS 765
           + + K  HEA+DDL   DFVA S
Sbjct: 407 SDLSKMVHEAIDDLEMPDFVAKS 429


>01_01_0441 - 3305319-3305894
          Length = 191

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 211 HEEGKYWHDYNYHAVFYYRSKHLKIWQLICAP 116
           H+EGK W D++Y+ V  Y +  L     IC P
Sbjct: 159 HDEGKRWADHDYYNVM-YATGPLAFRPAICPP 189


>09_04_0020 +
           13837257-13837281,13837364-13837550,13837655-13837727,
           13837769-13837804,13838161-13838281,13838399-13838472,
           13838594-13838730,13839262-13839325,13839693-13839758,
           13840061-13840130,13840206-13840310,13840840-13840981,
           13841343-13841439,13841939-13842460
          Length = 572

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 133 QLICAPLDHYKTKMKLK*RLQFSKFAICRLNFFFDFLIG 17
           Q +C  LD Y  +M LK  + FS     + N ++  LIG
Sbjct: 261 QELCILLDDYWERMNLKIPIYFSAGLTIQANMYYKMLIG 299


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,765,758
Number of Sequences: 37544
Number of extensions: 435056
Number of successful extensions: 1030
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)