Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_C10
         (486 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0471 + 34169562-34169892,34170121-34170347                       31   0.37 
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008           31   0.65 
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814...    30   0.86 
08_02_1289 - 25923916-25924586,25925148-25926630                       27   6.0  
04_03_0807 - 19860041-19860132,19860248-19860347,19861101-198611...    27   6.0  
03_05_0937 - 28967038-28967245,28967348-28967556,28967584-289676...    27   6.0  
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907...    27   8.0  

>03_06_0471 + 34169562-34169892,34170121-34170347
          Length = 185

 Score = 31.5 bits (68), Expect = 0.37
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 126 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFPG 275
           Y P    P    PP  Y P+  GY P   GAY       +P + P  +PG
Sbjct: 56  YPPAGGYPGAQYPPSGYPPSQGGYPP---GAYPPSGYPQQPGYPPAGYPG 102


>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
          Length = 580

 Score = 30.7 bits (66), Expect = 0.65
 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = +3

Query: 126 YEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDRPQGRPYFKPTPFPGARG 284
           Y P  + P  V PP  Y P  +G  P     N + Y + P GRP   P P  GA G
Sbjct: 394 YAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYGAGG 448


>06_03_0874 -
           25580417-25580419,25580504-25580604,25580828-25581411,
           25581523-25581594,25581667-25581793,25583412-25583516,
           25583643-25583676
          Length = 341

 Score = 30.3 bits (65), Expect = 0.86
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = +3

Query: 114 QGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPF 269
           QG  Y+P   R     PP+   P    Y P   G  Y  +PQG+PY  P P+
Sbjct: 246 QGETYQPQPQRE--TYPPQ---PQVQPYPPKPQGQPYPPQPQGQPY-PPQPY 291


>08_02_1289 - 25923916-25924586,25925148-25926630
          Length = 717

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -2

Query: 398 ALQYVYLFIPLT*I---HMKF*NILLIHYFVINFLRYSLLPTASTRERGRLEV 249
           ALQY+Y  +P+  +   H+K  NILL   F      YSL+P  +     +L V
Sbjct: 519 ALQYLYDELPMLTVPHGHLKSSNILLNDRFEPLLTDYSLVPVMNQSHSAQLMV 571


>04_03_0807 -
           19860041-19860132,19860248-19860347,19861101-19861170,
           19861344-19861407,19862531-19862704,19862805-19862946,
           19863413-19863544,19863616-19863705,19864093-19864152,
           19864227-19864343,19864441-19864611,19866909-19866984,
           19867156-19867223
          Length = 451

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +1

Query: 64  EILHDFRPRLCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVH 219
           +I+HD    L  LW   ++T T +LT +   LIL K    + T  +    +H
Sbjct: 159 KIMHDEGLSLVPLWDDQQQTVTGMLTASDFVLILRKLQRNIRTLGHEELEMH 210


>03_05_0937 -
           28967038-28967245,28967348-28967556,28967584-28967644,
           28967926-28968742,28968960-28971024
          Length = 1119

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +2

Query: 212 RCILRGPSPR-PTLLQAYPFPWCSRW 286
           + I+  PSP  P +  A  F WCS W
Sbjct: 755 KAIIHNPSPLIPPIFGADEFGWCSEW 780


>01_01_1145 +
           9073973-9074281,9075440-9075998,9076088-9076241,
           9077475-9077565,9077722-9077793,9077879-9078390,
           9078854-9078923,9079514-9079579,9080266-9080570,
           9080872-9081006,9081141-9081204,9081429-9081574,
           9081669-9081773,9082310-9082490
          Length = 922

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 117 GNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPT-PFP 272
           G+G    +N+ Y  N PK  +P  NG         Y   P G+P++ P  P P
Sbjct: 113 GHGNPNKNNQAYHRNGPKRRSPAANGTPSYPAAMPYHQHP-GQPFYYPVIPSP 164


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,982,708
Number of Sequences: 37544
Number of extensions: 250780
Number of successful extensions: 599
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)