Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_C10
(486 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein. 32 1.2
AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellu... 31 1.6
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 2.2
X03178-1|CAA26938.1| 474|Homo sapiens protein ( Human mRNA for ... 31 2.8
S67480-1|AAB29423.1| 474|Homo sapiens vitamin D-binding protein... 31 2.8
M12654-1|AAA52173.1| 474|Homo sapiens GC protein. 31 2.8
L10641-1|AAA61704.1| 474|Homo sapiens vitamin D-binding protein... 31 2.8
BC057228-1|AAH57228.1| 474|Homo sapiens group-specific componen... 31 2.8
AK223458-1|BAD97178.1| 474|Homo sapiens vitamin D-binding prote... 31 2.8
AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein. 30 3.8
CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein. 30 5.0
BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein. 30 5.0
AY048121-1|AAK85703.1| 659|Homo sapiens RAS guanyl releasing pr... 29 8.7
AY048119-1|AAK85701.1| 673|Homo sapiens RAS guanyl releasing pr... 29 8.7
>AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein.
Length = 338
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 103 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 270
WPT T ++L T +S +P T TN++ + T+P +T S P S
Sbjct: 179 WPTATNTLSSLTTNILSSTPVPSTERTTSHTTNINPVSTLVTTLP-TTITRSTPTS 233
>AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellular
receptor 1 protein.
Length = 359
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 121 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP---KADLTSSLP 264
T +TT RTS +P TTT+ T + ++ T TVP T+S+P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186
Score = 31.1 bits (67), Expect = 2.2
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +1
Query: 109 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLA 282
T+ T T TT T++ +P TTT+ T T +STT + T T+S+P++ ++
Sbjct: 149 TVPTTTTVPTTTVPTTMSIPTTTTVPTTMT-VSTTTSVP-TTTSIPTTTSVPVTTTVS 204
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 100 LWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLT 252
L +L T T+ L+T++ P+T T M TN +T+ T PK + T
Sbjct: 417 LTTSLAPTLTSELSTSQAETSTPRTETTMSPLTNTTTSQGTTRCQPKCEWT 467
>X03178-1|CAA26938.1| 474|Homo sapiens protein ( Human mRNA for
group-specific component (GC). ).
Length = 474
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 85 PRLCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 264
P +C+L L+ +LLTT ++ + + E + LS + + VP ADL LP
Sbjct: 195 PTVCFLKERLQLKHLSLLTTL-SNRVCSQYAAYGEKKSRLSNLIKLAQKVPTADLEDVLP 253
Query: 265 LS 270
L+
Sbjct: 254 LA 255
>S67480-1|AAB29423.1| 474|Homo sapiens vitamin D-binding
protein/group specific component protein.
Length = 474
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 85 PRLCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 264
P +C+L L+ +LLTT ++ + + E + LS + + VP ADL LP
Sbjct: 195 PTVCFLKERLQLKHLSLLTTL-SNRVCSQYAAYGEKKSRLSNLIKLAQKVPTADLEDVLP 253
Query: 265 LS 270
L+
Sbjct: 254 LA 255
>M12654-1|AAA52173.1| 474|Homo sapiens GC protein.
Length = 474
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 85 PRLCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 264
P +C+L L+ +LLTT ++ + + E + LS + + VP ADL LP
Sbjct: 195 PTVCFLKERLQLKHLSLLTTL-SNRVCSQYAAYGEKKSRLSNLIKLAQKVPTADLEDVLP 253
Query: 265 LS 270
L+
Sbjct: 254 LA 255
>L10641-1|AAA61704.1| 474|Homo sapiens vitamin D-binding protein
protein.
Length = 474
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 85 PRLCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 264
P +C+L L+ +LLTT ++ + + E + LS + + VP ADL LP
Sbjct: 195 PTVCFLKERLQLKHLSLLTTL-SNRVCSQYAAYGEKKSRLSNLIKLAQKVPTADLEDVLP 253
Query: 265 LS 270
L+
Sbjct: 254 LA 255
>BC057228-1|AAH57228.1| 474|Homo sapiens group-specific component
(vitamin D binding protein) protein.
Length = 474
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 85 PRLCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 264
P +C+L L+ +LLTT ++ + + E + LS + + VP ADL LP
Sbjct: 195 PTVCFLKERLQLKHLSLLTTL-SNRVCSQYAAYGEKKSRLSNLIKLAQKVPTADLEDVLP 253
Query: 265 LS 270
L+
Sbjct: 254 LA 255
>AK223458-1|BAD97178.1| 474|Homo sapiens vitamin D-binding protein
precursor variant protein.
Length = 474
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 85 PRLCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 264
P +C+L L+ +LLTT ++ + + E + LS + + VP ADL LP
Sbjct: 195 PTVCFLKERLQLKHLSLLTTL-SNRVCSQYAAYGEKKSRLSNLIKLAQKVPTADLEDVLP 253
Query: 265 LS 270
L+
Sbjct: 254 LA 255
>AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein.
Length = 589
Score = 30.3 bits (65), Expect = 3.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 106 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 270
PT T ++L ++ +S ++P T + TNL+ + + T+P +T S P S
Sbjct: 400 PTANSTLSSLTSSILSSTLVPSTDMITSHTTNLTRSSPLLATLP-TTITRSTPTS 453
>CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein.
Length = 364
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 121 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 237
T +TT RTS +P TTT+ T T +TTV T ++P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPMT-TVPTTTVPTTMSIP 173
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 139 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLA 282
TT T++ +P TTT++ T T +STT + T T+S+P++ ++
Sbjct: 164 TTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPVTTTVS 209
>BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein.
Length = 364
Score = 29.9 bits (64), Expect = 5.0
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 121 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 237
T +TT RTS +P TTT+ T T +TTV T ++P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPMT-TVPTTTVPTTMSIP 173
Score = 29.9 bits (64), Expect = 5.0
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 139 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLA 282
TT T++ +P TTT++ T T +STT + T T+S+P++ ++
Sbjct: 164 TTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPVTTTVS 209
>AY048121-1|AAK85703.1| 659|Homo sapiens RAS guanyl releasing
protein 4 variant 2 protein.
Length = 659
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 199 NLSTTVHITWTVPKADLTSSLPLSLVLAVGSKEYLRKLI 315
N+ +H +W +P ADL + L S A G + LR+L+
Sbjct: 83 NMVLAMH-SWVLPSADLAARLLTSYQKATGDTQELRRLL 120
>AY048119-1|AAK85701.1| 673|Homo sapiens RAS guanyl releasing
protein 4 protein.
Length = 673
Score = 29.1 bits (62), Expect = 8.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 199 NLSTTVHITWTVPKADLTSSLPLSLVLAVGSKEYLRKLI 315
N+ +H +W +P ADL + L S A G + LR+L+
Sbjct: 83 NMVLAMH-SWVLPSADLAARLLTSYQKATGDTQELRRLL 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,837,954
Number of Sequences: 237096
Number of extensions: 1426455
Number of successful extensions: 17430
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17426
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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