Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_C08
(839 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 296 2e-80
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 264 6e-71
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 51 1e-06
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 50 2e-06
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 32 0.49
11_06_0092 + 19973364-19975983,19976272-19976648 31 0.86
02_03_0138 - 15629421-15629440,15629521-15629752,15630115-156303... 31 1.5
06_01_0193 - 1491710-1491739,1492194-1492319,1492631-1492766,149... 30 2.0
05_03_0246 + 10895627-10895829,10897012-10897078,10898258-108984... 29 3.5
01_07_0036 + 40647046-40647100,40647120-40647571,40648135-406482... 29 3.5
04_04_0028 - 22243272-22243577,22244564-22244713,22244919-222456... 29 4.6
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 29 4.6
12_01_0962 - 9579051-9579707,9579804-9580706 29 6.1
10_06_0112 + 10899079-10900656,10900761-10900920,10900948-109010... 29 6.1
07_03_0537 - 19218461-19218982,19219482-19219868,19219993-192201... 29 6.1
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 296 bits (726), Expect = 2e-80
Identities = 144/241 (59%), Positives = 177/241 (73%), Gaps = 5/241 (2%)
Frame = +1
Query: 130 FGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTVGD 309
+GYV VSGPVV A+ M G+AMYELVRVG++ L+GEIIRLEGD ATIQVYEET+G+ V D
Sbjct: 19 YGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLMVND 78
Query: 310 PVLRTGK-----PLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAREVD 474
PVLRT K PLSVELGPGILG+IFDGIQRPLK I + +YIP+G++VP+L ++
Sbjct: 79 PVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSVPALDKDAL 138
Query: 475 WEFNPLNVKVGSHITGGDLYGIVHENTLVKHRMLVPPKAKGTVTYIAPAGNYKVTDVVLE 654
W F P + VG ITGGDLY IV+ENTL++H++ +PP A G ++YIAPAG Y + D VLE
Sbjct: 139 WHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALPPGAMGKISYIAPAGQYSLQDTVLE 198
Query: 655 TEFDGERXKYSMLQVWXXXXXXXXTXXLPANHPLLTGXRVLXSLFPCVQGGTTXIPGAFG 834
EF G + +++MLQ W L A+ PLLTG RVL +LFP V GGT IPGAFG
Sbjct: 199 LEFQGIKKEFTMLQTWPVRSPRPVMEKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFG 258
Query: 835 C 837
C
Sbjct: 259 C 259
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 264 bits (647), Expect = 6e-71
Identities = 136/237 (57%), Positives = 162/237 (68%)
Frame = +1
Query: 127 RFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTVG 306
R G V AVSGPVV A+ M G+AMYELVRVG + L+GEIIRLEGD ATIQVYEET+G+ V
Sbjct: 56 RIGGVLAVSGPVVVADGMGGAAMYELVRVGNDNLIGEIIRLEGDSATIQVYEETAGLMVN 115
Query: 307 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWEFN 486
DPVLRT KPLSVELGPGILG+IFDGIQRPLK I + +YIP+G++VP+L ++ W+F
Sbjct: 116 DPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSVPALDKDQLWDFE 175
Query: 487 PLNVKVGSHITGGDLYGIVHENTLVKHRMLVPPKAKGTVTYIAPAGNYKVTDVVLETEFD 666
P + VG ITGGDLY V ENTL+KH + +PP + G ++YIAPAG Y
Sbjct: 176 PKKLGVGDAITGGDLYATVFENTLMKHHVALPPGSMGKISYIAPAGQYS----------- 224
Query: 667 GERXKYSMLQVWXXXXXXXXTXXLPANHPLLTGXRVLXSLFPCVQGGTTXIPGAFGC 837
LQ W + L A+ PLLTG RVL +LFP V GGT IPGAFGC
Sbjct: 225 --------LQTWPVRSPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGC 273
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +1
Query: 139 VFAVSGPVVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMATIQVYEETSGV-TVG 306
V V+GP+V +K+ G E+V + + G+++ ++G+ A +QV+E TSG+
Sbjct: 64 VSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 123
Query: 307 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 432
V TG+ L + +LG IF+G +P+ + + Y+
Sbjct: 124 TTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYL 165
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +1
Query: 139 VFAVSGPVVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMATIQVYEETSGV-TVG 306
V V+GP+V +K+ G E+V + + G+++ ++G+ A +QV+E TSG+
Sbjct: 24 VSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 83
Query: 307 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYI 432
V TG+ L + +LG +F+G +P+ + + Y+
Sbjct: 84 TTVQFTGEVLKTPVSLDMLGRVFNGSGKPIDNGPPILPEAYL 125
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 32.3 bits (70), Expect = 0.49
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 172 EKMSGSAMYELVRVGYNELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVE 345
EKMS + EL+ +GYN+L G I M + + + ++ +G + G LS++
Sbjct: 469 EKMSNLSSLELIDLGYNQLTGAIPESIATMGNLGLLDVSNNHILGPLPTQIGTLLSIQ 526
>11_06_0092 + 19973364-19975983,19976272-19976648
Length = 998
Score = 31.5 bits (68), Expect = 0.86
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 229 VGEIIRLEGDMAT--IQVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPL 396
VG GD+ + I V E +G+ D RTG L + PG+ G + D + R L
Sbjct: 877 VGNTASTHGDIYSYGILVLETVTGMRPADSTFRTGLSLRQYVEPGLHGRLMDVVDRKL 934
>02_03_0138 -
15629421-15629440,15629521-15629752,15630115-15630348,
15630486-15630709,15631225-15631509,15631549-15631690
Length = 378
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 586 KAKGTVTYIAPAGNYKVTDVVLE 654
KA+ T++ AGNY+VTDVVLE
Sbjct: 71 KARMTISLDRGAGNYEVTDVVLE 93
>06_01_0193 -
1491710-1491739,1492194-1492319,1492631-1492766,
1493048-1493112,1493213-1493305,1493433-1493498,
1493763-1493843,1493977-1494032,1494692-1494780,
1495340-1495425,1495531-1495647,1496109-1496254,
1496665-1496725,1496831-1496914,1497028-1497135,
1497286-1497388,1497802-1497845,1498100-1498584,
1499417-1499603,1500150-1500362,1501066-1501323
Length = 877
Score = 30.3 bits (65), Expect = 2.0
Identities = 30/118 (25%), Positives = 49/118 (41%)
Frame = +1
Query: 286 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINELTQSIYIPKGINVPSLAR 465
+ +TVGD V+ G + L LGS++ ++ L D+ + Q + GI A+
Sbjct: 555 SGALTVGDLVMVNGLLFQLSLPLNFLGSVYRESRQSLIDMKSMFQLLEEKPGIKDEPHAQ 614
Query: 466 EVDWEFNPLNVKVGSHITGGDLYGIVHENTLVKHRMLVPPKAKGTVTYIAPAGNYKVT 639
PL K G +G V E ++K P K +V + +G+ K T
Sbjct: 615 -------PLQFKGGRIEFENVHFGYVPERKILKGATFTVPAGK-SVAIVGTSGSGKST 664
>05_03_0246 +
10895627-10895829,10897012-10897078,10898258-10898433,
10898450-10898583,10900165-10901594
Length = 669
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -2
Query: 337 TKAFQYGVLDHLQLHLKFLRIPGWWPCHLQDG*SHRRVHCNRH 209
T AF Y L H L L+ P W P + R V NRH
Sbjct: 247 TAAFPYNCLIHAHLRLRGSASPPWGPLRIFSAMLARGVRPNRH 289
>01_07_0036 +
40647046-40647100,40647120-40647571,40648135-40648257,
40648407-40648461,40648613-40648722,40649352-40649531,
40650003-40650101,40651182-40651280,40652195-40652289,
40652290-40652378,40652739-40652901,40653299-40653404,
40655647-40655829,40656059-40656286,40656373-40656486
Length = 716
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 415 TQSIYIPKGINVPSLAREVDWEFNPLNVKVGS--HITGGDLYGIVHENTLVKHRMLVPPK 588
++S+ IPKGI +PS D E + N K S G DL + H+N LV PK
Sbjct: 457 SKSLKIPKGIKIPSYCNGCDCEGDCANNKNCSCAQRNGSDLPYVSHKNI----GRLVEPK 512
Query: 589 A 591
A
Sbjct: 513 A 513
>04_04_0028 -
22243272-22243577,22244564-22244713,22244919-22245656,
22247233-22247331,22247541-22247933,22248806-22248961
Length = 613
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 164 SLPKKCPDLLCTSWSVSVTMNSSVRLSVLKVTW 262
+ P CPDL+CT S + ++R SVL W
Sbjct: 210 AFPGCCPDLICTILS-KLPQKEAIRTSVLSSKW 241
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 758 SSGWLAGXXSVTGRGWRTGHTCNMLYXCR 672
+SGWLAG V G G T + +L CR
Sbjct: 43 TSGWLAGALGVAGAGAATFYCMLLLLDCR 71
>12_01_0962 - 9579051-9579707,9579804-9580706
Length = 519
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 596 PLALGGTNILCLTRVFSCTIPYKSPPVMWDPTLTFN 489
P LGG +I TRVF T P +WD L ++
Sbjct: 382 PCTLGGYDIPARTRVFINTFAMGRDPEIWDNPLEYS 417
>10_06_0112 +
10899079-10900656,10900761-10900920,10900948-10901028,
10901264-10901517
Length = 690
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -1
Query: 581 GTNILCLTRVFSCTIPYKSPPVMWDPTLTFNGLNSQSTSLAREGTL 444
GTN T+ +P + PP + D TF+ L Q ++ E TL
Sbjct: 214 GTNDQICTQQLMALVPPRLPPELADAAATFSPLAPQGVTVKDERTL 259
>07_03_0537 -
19218461-19218982,19219482-19219868,19219993-19220154,
19220464-19221117,19221233-19221277,19223300-19223845,
19223930-19224307,19224642-19225313,19225373-19225456
Length = 1149
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +2
Query: 131 SDMS-SPY--LDPSSLPKKC--PDLLCTSWSVSVTMNSSVRLSVLKVTWPPSRYTKK 286
SD++ PY +DP+S+PK C PD LC S + V+ N LK + P R+ ++
Sbjct: 846 SDVNWEPYKGVDPASIPKHCAAPDNLCFSRTWLVSFN-------LKEIYAPDRFARQ 895
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,510,968
Number of Sequences: 37544
Number of extensions: 505959
Number of successful extensions: 1486
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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