Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_C07
(740 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 182 5e-47
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 118 7e-28
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 96 4e-21
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 88 1e-18
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 83 3e-17
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 69 7e-13
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 67 2e-12
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 66 7e-12
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 65 1e-11
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 64 2e-11
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 55 1e-08
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 54 2e-08
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 54 3e-08
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 52 9e-08
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 51 2e-07
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 48 2e-06
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 46 6e-06
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 46 7e-06
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 44 3e-05
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 40 5e-04
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 32 0.075
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 32 0.099
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 27 3.7
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 26 4.9
SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces... 26 4.9
SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces p... 25 8.6
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 182 bits (443), Expect = 5e-47
Identities = 93/221 (42%), Positives = 122/221 (55%)
Frame = +2
Query: 77 DNKLYXLLGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQV 256
+ KLY +L V AS++E+K+ Y KLA ++HPDKNP AGDKFKEIS AYE+L+D +KR
Sbjct: 4 ETKLYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRAT 63
Query: 257 YDLYXXXXXXXXXXXXXFPADEIXXXXXXXXXXXXXXXXXXXXXXPVRGEDTMHPLAVTL 436
YD + AD++ P +G+D +H + VTL
Sbjct: 64 YDRFGEEGLQGGGADGGMSADDL-----FASFFGGGMFGGGMPRGPRKGKDLVHTIKVTL 118
Query: 437 EDLYAGKTTKLQLSKNVICAHCKGVGGKPGSLISCKDCRGQGIKVSYQQIAPHMTRQFHS 616
EDLY GKTTKL L K VIC C G GGK GS+ SC C G G+K + + P M ++
Sbjct: 119 EDLYRGKTTKLALQKKVICPKCSGRGGKEGSVKSCASCNGSGVKFITRAMGP-MIQRMQM 177
Query: 617 RCPSCLGQGETFNEXXXXXXXXXXXVLNETKILXVHIEKGM 739
CP C G GET + V+++ KIL VH+EKGM
Sbjct: 178 TCPDCNGAGETIRDEDRCKECDGAKVISQRKILTVHVEKGM 218
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 118 bits (285), Expect = 7e-28
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Frame = +2
Query: 71 MADNKLYXLLGVSKNASESEIKRNYHKLAKEFHPDKNPA-----AGDKFKEISYAYEVLS 235
+ D KLY +L V AS EIK++Y +LA HPDK P A ++F+ + AY++L
Sbjct: 2 VVDTKLYDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILK 61
Query: 236 DPKKRQVYDLYXXXXXXXXXXXXXFPADEIXXXXXXXXXXXXXXXXXXXXXXPVRGEDTM 415
DP+ R++YD+Y D++ RG D +
Sbjct: 62 DPESREMYDMYGMNSDSNSQFDGGVNLDDVLAQMFGMNFEAGGPGKNVPRDRKRRGSDVI 121
Query: 416 HPLAVTLEDLYAGKTTKLQLSKNVICAHCKGVGGKP-GSLISCKDCRGQGIKVSYQQIAP 592
H ++LED++ GK KL+ ++N +C C+G GGK C C G+G+K + + P
Sbjct: 122 HDYEISLEDMFKGKEVKLRATRNTLCPRCQGRGGKRFAKEKPCLSCDGKGVKQHLKHVGP 181
Query: 593 HMTRQFHSRCPSCLGQGETF 652
H C +C G+G +F
Sbjct: 182 HHVTNSQVICDTCNGKGVSF 201
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 476 SKNVICAHCKGVGGKPGSLISCKDCRGQG 562
+ VIC C G G CK C+G G
Sbjct: 186 NSQVICDTCNGKGVSFRGKDRCKHCKGSG 214
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 96.3 bits (229), Expect = 4e-21
Identities = 64/199 (32%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Frame = +2
Query: 95 LLGVSKNASESEIKRNYHKLAKEFHPDKNPA---AGDKFKEISYAYEVLSDPKKRQVYDL 265
+LGVSK+ASESEI++ Y +L K++HPDKNP A +KF EI+ A+EVLSDP++R++YD
Sbjct: 11 ILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYDA 70
Query: 266 Y------XXXXXXXXXXXXXFPADEIXXXXXXXXXXXXXXXXXXXXXXPVRGEDTMHPLA 427
Y FP RG +
Sbjct: 71 YGEEGLNGQPGGPGGGPGEGFPGGGFGFDPFGDIFDNIFGGRRRQNAVR-RGPSMEQIVQ 129
Query: 428 VTLEDLYAGKTTKLQLSKNVICAHCKGVGGKP-----GSLISCKDCRGQGIKVSYQQIAP 592
+ L Y G + L++ C+ C G G P ++ SC C G G +V IAP
Sbjct: 130 IHLSSFYTGGSFTLEIPVKRTCSVCSGQGFNPKYSADKAIESCPVCGGSGFRVIEHMIAP 189
Query: 593 HMTRQFHSRCPSCLGQGET 649
+Q C +C G G T
Sbjct: 190 GFRQQMRMPCNACNGNGRT 208
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 87.8 bits (208), Expect = 1e-18
Identities = 40/66 (60%), Positives = 50/66 (75%)
Frame = +2
Query: 71 MADNKLYXLLGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKR 250
+AD KLY L V ASE+E+K+ Y KLA ++HPDKNP KFKEIS AYEVLSDP++R
Sbjct: 2 VADTKLYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRR 61
Query: 251 QVYDLY 268
++YD Y
Sbjct: 62 KLYDQY 67
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 83.4 bits (197), Expect = 3e-17
Identities = 40/62 (64%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = +2
Query: 89 YXLLGVSKNASESEIKRNYHKLAKEFHPDKNP--AAGDKFKEISYAYEVLSDPKKRQVYD 262
Y LGVSK+AS SEIK Y+KLAK++HPD NP AA DKF EI AYEVL DPKK++ +D
Sbjct: 88 YKTLGVSKSASASEIKSAYYKLAKQYHPDANPDKAAQDKFVEIKQAYEVLQDPKKKKAFD 147
Query: 263 LY 268
Y
Sbjct: 148 TY 149
Score = 43.2 bits (97), Expect = 4e-05
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Frame = +2
Query: 401 GEDTMHPLAVTLEDLYAGKTTKLQLSKNVICAHCKGVGGKPGSLIS-CKDCRGQGIKVSY 577
GED + + + G L S + C+ C G G +PGS S C C+G G ++ +
Sbjct: 210 GEDIEASITIDFMEAVRGAKKDLSYSVSSTCSSCHGSGLQPGSHKSTCFACKGTGQRLHF 269
Query: 578 QQIAPHMTRQFHSRCPSCLGQGETFNEXXXXXXXXXXXVLNETKILXVHIEKGM 739
+ HM + C SC G G T + E K + + I G+
Sbjct: 270 IPPSFHM----QTTCDSCGGTGTTIPPNSACRSCMGSGTVRERKTVSIDIPPGI 319
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 68.9 bits (161), Expect = 7e-13
Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Frame = +2
Query: 77 DNKLYXLLGVSKNASESEIKRNYHKLAKEFHPDKNP----AAGDKFKEISYAYEVLSDPK 244
D + Y LLG+S +A+ +IK+ Y KLA ++HPDKNP A +KF++IS AY+VL D K
Sbjct: 6 DTEYYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEK 65
Query: 245 KRQVYDLY 268
R YD +
Sbjct: 66 LRSQYDQF 73
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/65 (46%), Positives = 48/65 (73%), Gaps = 5/65 (7%)
Frame = +2
Query: 83 KLYXLLGVSKNASESEIKRNYHKLAKEFHPDKNPA-----AGDKFKEISYAYEVLSDPKK 247
+LY LG+ K+A+ +IK +Y++L++ FHPD++ A A +KF+ I +AYEVLSDP K
Sbjct: 8 ELYLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSK 67
Query: 248 RQVYD 262
+++YD
Sbjct: 68 KEIYD 72
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 65.7 bits (153), Expect = 7e-12
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Frame = +2
Query: 68 KMADNKLYXLLGVSKNASESEIKRNYHKLAKEFHPDKN--PAAGDKFKEISYAYEVLSDP 241
K +++ Y +L + K +++EIK++Y KLA + HPDKN P+A + FK +S A++VLSDP
Sbjct: 108 KYKNHQYYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDP 167
Query: 242 KKRQVYD 262
R YD
Sbjct: 168 NLRAHYD 174
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 64.9 bits (151), Expect = 1e-11
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Frame = +2
Query: 89 YXLLGVSKNASESEIKRNYHKLAKEFHPDKNPA---AGDKFKEISYAYEVLSDPKKRQVY 259
Y +LGVSK A++ EIK+ Y KLA +HPDKN A +FKE+ AY +LSDP+ R+ +
Sbjct: 351 YKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSDPESRRRF 410
Query: 260 D 262
D
Sbjct: 411 D 411
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 64.1 bits (149), Expect = 2e-11
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Frame = +2
Query: 65 EKMADNKLYXLLGVSKNASESEIKRNYHKLAKEFHPDKN----PAAGDKFKEISYAYEVL 232
+++ D Y +L +S +A IK++Y +LA +HPDKN AA +KF++++ AY+VL
Sbjct: 3 QRVVDRDYYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVL 62
Query: 233 SDPKKRQVYD 262
SDPK R+ YD
Sbjct: 63 SDPKLREKYD 72
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 54.8 bits (126), Expect = 1e-08
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Frame = +2
Query: 89 YXLLGVSKNASESEIKRNYHKLAKEFHPDKNPA----AGDKFKEISYAYEVLSDPKKRQV 256
Y +L + KNA+ +I++ Y LA ++HPD+NP A +F+ + A+EVLSD KR +
Sbjct: 14 YAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRLI 73
Query: 257 YD 262
YD
Sbjct: 74 YD 75
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 54.4 bits (125), Expect = 2e-08
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Frame = +2
Query: 89 YXLLGVSKNASESEIKRNYHKLAKEFHPDKN---PAAGDKFKEISYAYEVLSDPKKRQVY 259
Y LLG++++A + EI R + K + ++HPDKN P A +KF + AY L D + R+ Y
Sbjct: 11 YELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRKAY 70
Query: 260 D 262
D
Sbjct: 71 D 71
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 53.6 bits (123), Expect = 3e-08
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Frame = +2
Query: 77 DNKLYXLLGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDK---FKEISYAYEVLSDPKK 247
D Y +L V+ ++ EIK NY KLA ++HPD+NP D F +I+ AY +LS+ K
Sbjct: 7 DMDCYEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDDK 66
Query: 248 RQVYD 262
R+ ++
Sbjct: 67 RKWHE 71
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 52.0 bits (119), Expect = 9e-08
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Frame = +2
Query: 89 YXLLGVSKNASESEIKRNYHKLAKEFHPDKNPAAG----DKFKEISYAYEVLSDPKKRQV 256
Y +LG +S EI++ Y KL +HPD+NP +F+ I A+EVL DPK R++
Sbjct: 14 YTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLREL 73
Query: 257 YD 262
+D
Sbjct: 74 FD 75
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 50.8 bits (116), Expect = 2e-07
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 89 YXLLGVSKNASESEIKRNYHKLAKEFHPD------KNPAAGDKFKEISYAYEVLSDPKKR 250
Y +LGV K+AS+ I+R Y K A + HPD K A +F +++ AY VLSD K+R
Sbjct: 33 YSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRR 92
Query: 251 QVYD 262
+ YD
Sbjct: 93 KHYD 96
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 47.6 bits (108), Expect = 2e-06
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Frame = +2
Query: 89 YXLLGVSKNASESEIKRNYHKLAKEFHPDK-----NPAAGDKFK---EISYAYEVLSDPK 244
Y +LG++K S +++R+Y +L+ +FHPDK N + K EI+ AY L+D K
Sbjct: 100 YEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDK 159
Query: 245 KRQVYDLY 268
R+ Y LY
Sbjct: 160 TRENYALY 167
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 46.0 bits (104), Expect = 6e-06
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Frame = +2
Query: 89 YXLLGVSKNASESEIKRNYHKLAKEFHPDK-NPA----AGDKFKEISYAYEVLSDPKKRQ 253
Y +L ++ AS EIK Y K A E HPD+ +P+ A ++F+ ++ AY VLSD +R
Sbjct: 6 YAILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSRRA 65
Query: 254 VYD 262
YD
Sbjct: 66 QYD 68
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 45.6 bits (103), Expect = 7e-06
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Frame = +2
Query: 89 YXLLGVSK---NASESEIKRNYHKLAKEFHPDKNPAAGDK-----FKEISYAYEVLSDPK 244
Y +LG+SK A +IK+ + K + HPDK A+G+ FK I AYE+LSDP
Sbjct: 99 YAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILSDPV 158
Query: 245 KRQVYD 262
+R+ +D
Sbjct: 159 RRRQFD 164
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 43.6 bits (98), Expect = 3e-05
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 89 YXLLGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQVYDLY 268
Y LL V AS EI R Y K + +HPDKNP + + + + +L + + R+ YD +
Sbjct: 42 YELLEVPTKASIKEINRAYRKKSILYHPDKNPKSKELYTLLGLIVNILRNTETRKRYDYF 101
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 39.5 bits (88), Expect = 5e-04
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 110 KNASESEIKRNYHKLAKEFHPDK---NPAAGDKFKEISYAYEVLSDPKKRQVYDL 265
K ++ EIK Y K FHPDK P+ ++ AY+VLS K RQ Y +
Sbjct: 13 KTYTDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKDRQQYQI 67
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 32.3 bits (70), Expect = 0.075
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +2
Query: 89 YXLLGVSKNASESEIKRNYHKLAKEFHPDK---NPAAGDKFKEISYAYEVLSDPKKRQVY 259
Y +L + S +I+ Y K + HPDK NP A D F + A L + K R+
Sbjct: 33 YDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESL 92
Query: 260 D 262
D
Sbjct: 93 D 93
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 31.9 bits (69), Expect = 0.099
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 89 YXLLGVSKNASESEIKRNYHKLAKEFHPDK 178
Y +L + + + ++IKR Y +L K+ HPDK
Sbjct: 34 YEILELPRTCTANDIKRKYIELVKKHHPDK 63
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 26.6 bits (56), Expect = 3.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 581 QIAPHMTRQFHSRCPSCLGQGET 649
++ P+ FH+ CPSC Q +T
Sbjct: 246 EVDPNEVHTFHATCPSCSHQCDT 268
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 113 NASESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVLSDPKKRQV 256
N + + RN H +K HP+ + + + + S LS PK+R V
Sbjct: 600 NKFPNSVSRNTHFESKSPHPNYSRTPHETYSKASSKNVPLSPPKQRVV 647
>SPBC2D10.13 |est1||telomerase regulator Est1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = -2
Query: 208 FFKFITSCRIFVRV---ELFSKFVVISF 134
FFKF+ +C IF + EL SKF + S+
Sbjct: 100 FFKFLKTCAIFYQTCISELISKFQLDSY 127
>SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 95 LLGVSKNASESEIKRNYHKLAKEFHPDKNPAAGDKFKEISYAYEVL 232
LL + ++ +I+R + AKE +++ A D +E+S+ VL
Sbjct: 240 LLAACQKKNQVKIQRQILETAKESEDNQHQAPVDSDEEVSFIMNVL 285
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,905,525
Number of Sequences: 5004
Number of extensions: 60013
Number of successful extensions: 207
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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