Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_C03
         (807 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0398 - 3515439-3515573,3515965-3516516                           29   3.3  
04_04_0226 + 23754513-23756914,23756972-23757050,23759296-23760153     29   4.4  
07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993     28   7.6  

>08_01_0398 - 3515439-3515573,3515965-3516516
          Length = 228

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
 Frame = +1

Query: 364 PRQITKILLTNDLTEDVA-LEAEILACEMIISYHPPIFAPLKSIV---QRSWKERVVSYL 531
           PR  T+ L+  DL +++A LEAE  AC   +      FA L  +V   Q S  +   S  
Sbjct: 142 PRSETEKLIA-DLEKEIANLEAENTACIRTLELRKKQFALLLHVVEELQISIDDEQRSIA 200

Query: 532 LEKRIALYSPHTSWDSVRGGVNDWLA 609
            E R A      S + V GG +D +A
Sbjct: 201 DELRAATEEQKMSIEEVSGGASDAMA 226


>04_04_0226 + 23754513-23756914,23756972-23757050,23759296-23760153
          Length = 1112

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 307 PKELAESWDNTGLLVEPYTPRQITKILLTND 399
           PKE A  W+N G     + PR I + + ++D
Sbjct: 264 PKEAARKWNNIGWTTVDFIPRNICQAIRSDD 294


>07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993
          Length = 678

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -2

Query: 173 KNISNISCLPLEKSEVLENKLFQK 102
           KNI NI CL +E+++ LEN + ++
Sbjct: 199 KNILNIGCLEIERNQRLENLIARR 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,157,280
Number of Sequences: 37544
Number of extensions: 405678
Number of successful extensions: 865
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)