Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_C03
(807 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007654-1|AAH07654.1| 377|Homo sapiens NIF3L1 protein protein. 137 4e-32
AY251944-1|AAP84064.1| 252|Homo sapiens NIF3L1 isoform gamma pr... 137 4e-32
AY251943-1|AAP84063.1| 285|Homo sapiens NIF3L1 isoform beta pro... 137 4e-32
AK023378-1|BAB14551.1| 350|Homo sapiens protein ( Homo sapiens ... 137 4e-32
AF283538-1|AAG44846.1| 377|Homo sapiens NIF3L1 protein protein. 137 4e-32
AF060513-1|AAG43131.1| 350|Homo sapiens My018 protein protein. 137 4e-32
AC005037-3|AAY14724.1| 377|Homo sapiens unknown protein. 137 4e-32
AB038949-1|BAB32499.1| 350|Homo sapiens amyotrophic lateral scl... 137 4e-32
AF182416-1|AAG14952.1| 351|Homo sapiens MDS015 protein. 128 3e-29
BC130466-1|AAI30467.1| 1137|Homo sapiens adaptor-related protein... 32 2.8
BC126308-1|AAI26309.1| 1137|Homo sapiens adaptor-related protein... 32 2.8
AF155156-1|AAD43326.2| 1135|Homo sapiens adaptor-related protein... 32 2.8
AB030653-1|BAA82969.1| 1137|Homo sapiens epsilon-adaptin protein. 32 2.8
AY338826-1|AAR08421.2| 2590|Homo sapiens DNA polymerase theta pr... 31 4.9
AY032677-1|AAK39635.1| 2724|Homo sapiens DNA polymerase theta pr... 31 4.9
AF052573-1|AAC33565.1| 1762|Homo sapiens DNA polymerase theta pr... 31 4.9
AB209867-1|BAD93104.1| 2214|Homo sapiens DNA polymerase theta va... 31 4.9
BC119018-1|AAI19019.1| 136|Homo sapiens LOC728276 protein protein. 30 8.6
AY358232-1|AAQ88599.1| 136|Homo sapiens QRWT5810 protein. 30 8.6
>BC007654-1|AAH07654.1| 377|Homo sapiens NIF3L1 protein protein.
Length = 377
Score = 137 bits (332), Expect = 4e-32
Identities = 62/134 (46%), Positives = 85/134 (63%)
Frame = +1
Query: 265 VSLEKVVTELEKFAPKELAESWDNTGLLVEPYTPRQITKILLTNDLTEDVALEAEILACE 444
+ L+ +++ L FA AESWDN GLLVEP P + + LTNDLTE+V E +
Sbjct: 28 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD 87
Query: 445 MIISYHPPIFAPLKSIVQRSWKERVVSYLLEKRIALYSPHTSWDSVRGGVNDWLASAFFV 624
+I+SYHPPIF P+K I +WKER+V LE R+ +YSPHT++D+ GVN+WLA
Sbjct: 88 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA 147
Query: 625 AESKPILQSNNPDF 666
S+PI S P++
Sbjct: 148 CTSRPIHPSKAPNY 161
Score = 36.7 bits (81), Expect = 0.099
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 667 GAGRLLHLSSGIPLSDAVNKIKELTRLSHVRIAVAKGKSMTHSV 798
G GRL L + L+ +++IK +LSH+R+A+ G+++ V
Sbjct: 249 GMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQV 292
>AY251944-1|AAP84064.1| 252|Homo sapiens NIF3L1 isoform gamma
protein.
Length = 252
Score = 137 bits (332), Expect = 4e-32
Identities = 62/134 (46%), Positives = 85/134 (63%)
Frame = +1
Query: 265 VSLEKVVTELEKFAPKELAESWDNTGLLVEPYTPRQITKILLTNDLTEDVALEAEILACE 444
+ L+ +++ L FA AESWDN GLLVEP P + + LTNDLTE+V E +
Sbjct: 28 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD 87
Query: 445 MIISYHPPIFAPLKSIVQRSWKERVVSYLLEKRIALYSPHTSWDSVRGGVNDWLASAFFV 624
+I+SYHPPIF P+K I +WKER+V LE R+ +YSPHT++D+ GVN+WLA
Sbjct: 88 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA 147
Query: 625 AESKPILQSNNPDF 666
S+PI S P++
Sbjct: 148 CTSRPIHPSKAPNY 161
>AY251943-1|AAP84063.1| 285|Homo sapiens NIF3L1 isoform beta
protein.
Length = 285
Score = 137 bits (332), Expect = 4e-32
Identities = 62/134 (46%), Positives = 85/134 (63%)
Frame = +1
Query: 265 VSLEKVVTELEKFAPKELAESWDNTGLLVEPYTPRQITKILLTNDLTEDVALEAEILACE 444
+ L+ +++ L FA AESWDN GLLVEP P + + LTNDLTE+V E +
Sbjct: 28 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD 87
Query: 445 MIISYHPPIFAPLKSIVQRSWKERVVSYLLEKRIALYSPHTSWDSVRGGVNDWLASAFFV 624
+I+SYHPPIF P+K I +WKER+V LE R+ +YSPHT++D+ GVN+WLA
Sbjct: 88 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA 147
Query: 625 AESKPILQSNNPDF 666
S+PI S P++
Sbjct: 148 CTSRPIHPSKAPNY 161
>AK023378-1|BAB14551.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ13316 fis, clone OVARC1001555, weakly similar to
NGG1-INTERACTING FACTOR 3. ).
Length = 350
Score = 137 bits (332), Expect = 4e-32
Identities = 62/134 (46%), Positives = 85/134 (63%)
Frame = +1
Query: 265 VSLEKVVTELEKFAPKELAESWDNTGLLVEPYTPRQITKILLTNDLTEDVALEAEILACE 444
+ L+ +++ L FA AESWDN GLLVEP P + + LTNDLTE+V E +
Sbjct: 1 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD 60
Query: 445 MIISYHPPIFAPLKSIVQRSWKERVVSYLLEKRIALYSPHTSWDSVRGGVNDWLASAFFV 624
+I+SYHPPIF P+K I +WKER+V LE R+ +YSPHT++D+ GVN+WLA
Sbjct: 61 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA 120
Query: 625 AESKPILQSNNPDF 666
S+PI S P++
Sbjct: 121 CTSRPIHPSKAPNY 134
Score = 36.7 bits (81), Expect = 0.099
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 667 GAGRLLHLSSGIPLSDAVNKIKELTRLSHVRIAVAKGKSMTHSV 798
G GRL L + L+ +++IK +LSH+R+A+ G+++ V
Sbjct: 222 GMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQV 265
>AF283538-1|AAG44846.1| 377|Homo sapiens NIF3L1 protein protein.
Length = 377
Score = 137 bits (332), Expect = 4e-32
Identities = 62/134 (46%), Positives = 85/134 (63%)
Frame = +1
Query: 265 VSLEKVVTELEKFAPKELAESWDNTGLLVEPYTPRQITKILLTNDLTEDVALEAEILACE 444
+ L+ +++ L FA AESWDN GLLVEP P + + LTNDLTE+V E +
Sbjct: 28 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD 87
Query: 445 MIISYHPPIFAPLKSIVQRSWKERVVSYLLEKRIALYSPHTSWDSVRGGVNDWLASAFFV 624
+I+SYHPPIF P+K I +WKER+V LE R+ +YSPHT++D+ GVN+WLA
Sbjct: 88 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA 147
Query: 625 AESKPILQSNNPDF 666
S+PI S P++
Sbjct: 148 CTSRPIHPSKAPNY 161
Score = 36.7 bits (81), Expect = 0.099
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 667 GAGRLLHLSSGIPLSDAVNKIKELTRLSHVRIAVAKGKSMTHSV 798
G GRL L + L+ +++IK +LSH+R+A+ G+++ V
Sbjct: 249 GMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQV 292
>AF060513-1|AAG43131.1| 350|Homo sapiens My018 protein protein.
Length = 350
Score = 137 bits (332), Expect = 4e-32
Identities = 62/134 (46%), Positives = 85/134 (63%)
Frame = +1
Query: 265 VSLEKVVTELEKFAPKELAESWDNTGLLVEPYTPRQITKILLTNDLTEDVALEAEILACE 444
+ L+ +++ L FA AESWDN GLLVEP P + + LTNDLTE+V E +
Sbjct: 1 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD 60
Query: 445 MIISYHPPIFAPLKSIVQRSWKERVVSYLLEKRIALYSPHTSWDSVRGGVNDWLASAFFV 624
+I+SYHPPIF P+K I +WKER+V LE R+ +YSPHT++D+ GVN+WLA
Sbjct: 61 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA 120
Query: 625 AESKPILQSNNPDF 666
S+PI S P++
Sbjct: 121 CTSRPIHPSKAPNY 134
Score = 36.7 bits (81), Expect = 0.099
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 667 GAGRLLHLSSGIPLSDAVNKIKELTRLSHVRIAVAKGKSMTHSV 798
G GRL L + L+ +++IK +LSH+R+A+ G+++ V
Sbjct: 222 GMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQV 265
>AC005037-3|AAY14724.1| 377|Homo sapiens unknown protein.
Length = 377
Score = 137 bits (332), Expect = 4e-32
Identities = 62/134 (46%), Positives = 85/134 (63%)
Frame = +1
Query: 265 VSLEKVVTELEKFAPKELAESWDNTGLLVEPYTPRQITKILLTNDLTEDVALEAEILACE 444
+ L+ +++ L FA AESWDN GLLVEP P + + LTNDLTE+V E +
Sbjct: 28 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD 87
Query: 445 MIISYHPPIFAPLKSIVQRSWKERVVSYLLEKRIALYSPHTSWDSVRGGVNDWLASAFFV 624
+I+SYHPPIF P+K I +WKER+V LE R+ +YSPHT++D+ GVN+WLA
Sbjct: 88 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA 147
Query: 625 AESKPILQSNNPDF 666
S+PI S P++
Sbjct: 148 CTSRPIHPSKAPNY 161
Score = 36.7 bits (81), Expect = 0.099
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 667 GAGRLLHLSSGIPLSDAVNKIKELTRLSHVRIAVAKGKSMTHSV 798
G GRL L + L+ +++IK +LSH+R+A+ G+++ V
Sbjct: 249 GMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQV 292
>AB038949-1|BAB32499.1| 350|Homo sapiens amyotrophic lateral
sclerosis 2 protein.
Length = 350
Score = 137 bits (332), Expect = 4e-32
Identities = 62/134 (46%), Positives = 85/134 (63%)
Frame = +1
Query: 265 VSLEKVVTELEKFAPKELAESWDNTGLLVEPYTPRQITKILLTNDLTEDVALEAEILACE 444
+ L+ +++ L FA AESWDN GLLVEP P + + LTNDLTE+V E +
Sbjct: 1 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD 60
Query: 445 MIISYHPPIFAPLKSIVQRSWKERVVSYLLEKRIALYSPHTSWDSVRGGVNDWLASAFFV 624
+I+SYHPPIF P+K I +WKER+V LE R+ +YSPHT++D+ GVN+WLA
Sbjct: 61 LILSYHPPIFRPMKRITWNTWKERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLGA 120
Query: 625 AESKPILQSNNPDF 666
S+PI S P++
Sbjct: 121 CTSRPIHPSKAPNY 134
Score = 36.7 bits (81), Expect = 0.099
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 667 GAGRLLHLSSGIPLSDAVNKIKELTRLSHVRIAVAKGKSMTHSV 798
G GRL L + L+ +++IK +LSH+R+A+ G+++ V
Sbjct: 222 GMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQV 265
>AF182416-1|AAG14952.1| 351|Homo sapiens MDS015 protein.
Length = 351
Score = 128 bits (308), Expect = 3e-29
Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 1/135 (0%)
Frame = +1
Query: 265 VSLEKVVTELEKFAPKELAESWDNTGLLVEPYTPRQITKILLTNDLTEDVALEAEILACE 444
+ L+ +++ L FA AESWDN GLLVEP P + + LTNDLTE+V E +
Sbjct: 1 MDLKALLSSLNDFASLSFAESWDNVGLLVEPSPPHTVNTLFLTNDLTEEVMEEVLQKKAD 60
Query: 445 MIISYHPPIFAPLKSI-VQRSWKERVVSYLLEKRIALYSPHTSWDSVRGGVNDWLASAFF 621
+I+SYHPPIF P+K I ++ +ER+V LE R+ +YSPHT++D+ GVN+WLA
Sbjct: 61 LILSYHPPIFRPMKRINLEHMGRERLVIRALENRVGIYSPHTAYDAAPQGVNNWLAKGLG 120
Query: 622 VAESKPILQSNNPDF 666
S+PI S P++
Sbjct: 121 ACTSRPIHPSKAPNY 135
Score = 36.7 bits (81), Expect = 0.099
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 667 GAGRLLHLSSGIPLSDAVNKIKELTRLSHVRIAVAKGKSMTHSV 798
G GRL L + L+ +++IK +LSH+R+A+ G+++ V
Sbjct: 223 GMGRLCTLDESVSLATMIDRIKRHLKLSHIRLALGVGRTLESQV 266
>BC130466-1|AAI30467.1| 1137|Homo sapiens adaptor-related protein
complex 4, epsilon 1 subunit protein.
Length = 1137
Score = 31.9 bits (69), Expect = 2.8
Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Frame = +1
Query: 232 FIKMSTEKFCAVSLEKVVTEL-EKFAP------KELAESWDNTGLLVEPYTPRQITKILL 390
++ S E++ V+L + EL EK+AP + + + G ++ P P ++L
Sbjct: 416 YLHQSKEEYVIVNLVGKIAELAEKYAPDNAWFIQTMNAVFSVGGDVMHPDIPNNFLRLLA 475
Query: 391 T--NDLTEDVALEAEILACEMIISYHPPIFAPLKSIVQRSWKERVVSYLLEKR-----IA 549
+D TED L + + + +F P + + SW SYLL+K IA
Sbjct: 476 EGFDDETEDQQLRLYAVQSYLTLLDMENVFYPQRFLQVMSWVLGEYSYLLDKETPEEVIA 535
Query: 550 LYSPHTSWDSVRGGVNDWLASA 615
DSV WL +A
Sbjct: 536 KLYKLLMNDSVSSETKAWLIAA 557
>BC126308-1|AAI26309.1| 1137|Homo sapiens adaptor-related protein
complex 4, epsilon 1 subunit protein.
Length = 1137
Score = 31.9 bits (69), Expect = 2.8
Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Frame = +1
Query: 232 FIKMSTEKFCAVSLEKVVTEL-EKFAP------KELAESWDNTGLLVEPYTPRQITKILL 390
++ S E++ V+L + EL EK+AP + + + G ++ P P ++L
Sbjct: 416 YLHQSKEEYVIVNLVGKIAELAEKYAPDNAWFIQTMNAVFSVGGDVMHPDIPNNFLRLLA 475
Query: 391 T--NDLTEDVALEAEILACEMIISYHPPIFAPLKSIVQRSWKERVVSYLLEKR-----IA 549
+D TED L + + + +F P + + SW SYLL+K IA
Sbjct: 476 EGFDDETEDQQLRLYAVQSYLTLLDMENVFYPQRFLQVMSWVLGEYSYLLDKETPEEVIA 535
Query: 550 LYSPHTSWDSVRGGVNDWLASA 615
DSV WL +A
Sbjct: 536 KLYKLLMNDSVSSETKAWLIAA 557
>AF155156-1|AAD43326.2| 1135|Homo sapiens adaptor-related protein
complex AP-4 epsilon subunit protein.
Length = 1135
Score = 31.9 bits (69), Expect = 2.8
Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Frame = +1
Query: 232 FIKMSTEKFCAVSLEKVVTEL-EKFAP------KELAESWDNTGLLVEPYTPRQITKILL 390
++ S E++ V+L + EL EK+AP + + + G ++ P P ++L
Sbjct: 414 YLHQSKEEYVIVNLVGKIAELAEKYAPDNAWFIQTMNAVFSVGGDVMHPDIPNNFLRLLA 473
Query: 391 T--NDLTEDVALEAEILACEMIISYHPPIFAPLKSIVQRSWKERVVSYLLEKR-----IA 549
+D TED L + + + +F P + + SW SYLL+K IA
Sbjct: 474 EGFDDETEDQQLRLYAVQSYLTLLDMENVFYPQRFLQVMSWVLGEYSYLLDKETPEEVIA 533
Query: 550 LYSPHTSWDSVRGGVNDWLASA 615
DSV WL +A
Sbjct: 534 KLYKLLMNDSVSSETKAWLIAA 555
>AB030653-1|BAA82969.1| 1137|Homo sapiens epsilon-adaptin protein.
Length = 1137
Score = 31.9 bits (69), Expect = 2.8
Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 14/142 (9%)
Frame = +1
Query: 232 FIKMSTEKFCAVSLEKVVTEL-EKFAP------KELAESWDNTGLLVEPYTPRQITKILL 390
++ S E++ V+L + EL EK+AP + + + G ++ P P ++L
Sbjct: 416 YLHQSKEEYVIVNLVGKIAELAEKYAPDNAWFIQTMNAVFSVGGDVMHPDIPNNFLRLLA 475
Query: 391 T--NDLTEDVALEAEILACEMIISYHPPIFAPLKSIVQRSWKERVVSYLLEKR-----IA 549
+D TED L + + + +F P + + SW SYLL+K IA
Sbjct: 476 EGFDDETEDQQLRLYAVQSYLTLLDMENVFYPQRFLQVMSWVLGEYSYLLDKETPEEVIA 535
Query: 550 LYSPHTSWDSVRGGVNDWLASA 615
DSV WL +A
Sbjct: 536 KLYKLLMNDSVSSETKAWLIAA 557
>AY338826-1|AAR08421.2| 2590|Homo sapiens DNA polymerase theta
protein.
Length = 2590
Score = 31.1 bits (67), Expect = 4.9
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 565 TSWDSVRGGVNDWLASAFFVAESKPILQSNNPDFGAG----RLLHLSSGIPLSDAVNKIK 732
T W + R G+ + A+A V E++ ILQ + + G LLH SS L+ + +++K
Sbjct: 861 TIWVTGRKGLTEREAAALIVEEARMILQQDLVEMGVQWNPCALLH-SSTCSLTHSESEVK 919
Query: 733 ELTRLSHVRIAVAKGKSMTHS 795
E T +S + + K S S
Sbjct: 920 EHTFISQTKSSYKKLTSKNKS 940
>AY032677-1|AAK39635.1| 2724|Homo sapiens DNA polymerase theta
protein.
Length = 2724
Score = 31.1 bits (67), Expect = 4.9
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 565 TSWDSVRGGVNDWLASAFFVAESKPILQSNNPDFGAG----RLLHLSSGIPLSDAVNKIK 732
T W + R G+ + A+A V E++ ILQ + + G LLH SS L+ + +++K
Sbjct: 995 TIWVTGRKGLTEREAAALIVEEARMILQQDLVEMGVQWNPCALLH-SSTCSLTHSESEVK 1053
Query: 733 ELTRLSHVRIAVAKGKSMTHS 795
E T +S + + K S S
Sbjct: 1054 EHTFISQTKSSYKKLTSKNKS 1074
>AF052573-1|AAC33565.1| 1762|Homo sapiens DNA polymerase theta
protein.
Length = 1762
Score = 31.1 bits (67), Expect = 4.9
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 565 TSWDSVRGGVNDWLASAFFVAESKPILQSNNPDFGAG----RLLHLSSGIPLSDAVNKIK 732
T W + R G+ + A+A V E++ ILQ + + G LLH SS L+ + +++K
Sbjct: 33 TIWVTGRKGLTEREAAALIVEEARMILQQDLVEMGVQWNPCALLH-SSTCSLTHSESEVK 91
Query: 733 ELTRLSHVRIAVAKGKSMTHS 795
E T +S + + K S S
Sbjct: 92 EHTFISQTKSSYKKLTSKNKS 112
>AB209867-1|BAD93104.1| 2214|Homo sapiens DNA polymerase theta
variant protein.
Length = 2214
Score = 31.1 bits (67), Expect = 4.9
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 565 TSWDSVRGGVNDWLASAFFVAESKPILQSNNPDFGAG----RLLHLSSGIPLSDAVNKIK 732
T W + R G+ + A+A V E++ ILQ + + G LLH SS L+ + +++K
Sbjct: 485 TIWVTGRKGLTEREAAALIVEEARMILQQDLVEMGVQWNPCALLH-SSTCSLTHSESEVK 543
Query: 733 ELTRLSHVRIAVAKGKSMTHS 795
E T +S + + K S S
Sbjct: 544 EHTFISQTKSSYKKLTSKNKS 564
>BC119018-1|AAI19019.1| 136|Homo sapiens LOC728276 protein protein.
Length = 136
Score = 30.3 bits (65), Expect = 8.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 333 IPTLCQFFWSKFFKFCYYFF 274
+P+LC FW +F CY FF
Sbjct: 36 LPSLCPLFWMEFKGHCYRFF 55
>AY358232-1|AAQ88599.1| 136|Homo sapiens QRWT5810 protein.
Length = 136
Score = 30.3 bits (65), Expect = 8.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 333 IPTLCQFFWSKFFKFCYYFF 274
+P+LC FW +F CY FF
Sbjct: 36 LPSLCPLFWMEFKGHCYRFF 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,300,675
Number of Sequences: 237096
Number of extensions: 2301733
Number of successful extensions: 7866
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7865
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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