Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_C03
         (807 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46242-9|CAA86334.2|  491|Caenorhabditis elegans Hypothetical pr...    31   0.97 
AL117199-3|CAB55043.3|  868|Caenorhabditis elegans Hypothetical ...    29   3.9  
AC024214-12|AAF36072.2|  370|Caenorhabditis elegans Hypothetical...    28   6.8  
Z98860-2|CAB11545.1|  337|Caenorhabditis elegans Hypothetical pr...    28   9.0  
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ...    28   9.0  

>Z46242-9|CAA86334.2|  491|Caenorhabditis elegans Hypothetical
           protein F35G12.12 protein.
          Length = 491

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 21/94 (22%), Positives = 48/94 (51%)
 Frame = +1

Query: 271 LEKVVTELEKFAPKELAESWDNTGLLVEPYTPRQITKILLTNDLTEDVALEAEILACEMI 450
           LEK+  +++  A +++    D      + ++  ++ K+++ +  T+D+ ++ +I+  E I
Sbjct: 31  LEKLA-KMQIEAAQQMETEDDVAAADFDDFSTSKLVKLIIGDISTKDLLVDHQIILLEFI 89

Query: 451 ISYHPPIFAPLKSIVQRSWKERVVSYLLEKRIAL 552
            S HP I   +   V+   KE  +S L    +A+
Sbjct: 90  PSAHPNILRHVVRTVRE--KEGAISLLKSSSVAI 121


>AL117199-3|CAB55043.3|  868|Caenorhabditis elegans Hypothetical
           protein Y43F11A.5 protein.
          Length = 868

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +1

Query: 217 HLFTHFIKMSTEKFCAVSLEKVVTELEKFAPKELAESWDNTGLLVEPYTPRQITK 381
           H  THF KM     C +   +V+  L +    E  E W     +   +TPR + K
Sbjct: 170 HCATHFDKMIE---CPMESRRVLAALGRARIAEEKEFWSKNRAIARSFTPRSMAK 221


>AC024214-12|AAF36072.2|  370|Caenorhabditis elegans Hypothetical
           protein Y77E11A.2 protein.
          Length = 370

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 20/93 (21%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
 Frame = +1

Query: 538 KRIALYSPHTSWDSVRGGVNDWLASAFFVAESKPILQSNNPDFGAGRLLHLSSGIPLSDA 717
           +++A Y P        GG   +LA+A  V ++ PI+  N    G+   L +    P  D 
Sbjct: 105 EQLAQYLPEADLVISAGGDGTFLAAASVVNDNTPIIGINTDPIGSEGHLCVGGKNPPRDL 164

Query: 718 VNKI----KELTRLSHVRIAVAKGKSMTHSVXR 804
           + ++     +  + + +R+ V + ++   S+ R
Sbjct: 165 IERLVSGNLKWVQRTRIRVTVKESRNSIFSLKR 197


>Z98860-2|CAB11545.1|  337|Caenorhabditis elegans Hypothetical
           protein Y26G10.2 protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -1

Query: 387 QNFGYLSWCVRFHQ*TSVIPTLCQFFWSKFFKF 289
           +NFG L W + FH  +     LC F    F+ F
Sbjct: 47  KNFGSLKWFLVFHIFSITCQWLCSFLLVNFYTF 79


>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
           protein Y38C9A.1 protein.
          Length = 1484

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 96  ITFLKQFVFKHFTLLEWQTRNITNVLSVRQAHFKVKKFKESLVHTF 233
           +T LK+   + FTL+  +  +I +   + Q HF+  +F E+  H F
Sbjct: 842 VTELKEMCTRAFTLVTDRFPHIKSFYRLAQLHFEKGEFDEASEHIF 887


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,028,379
Number of Sequences: 27780
Number of extensions: 385053
Number of successful extensions: 1025
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)