Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_C01
         (833 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   2.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   3.9  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    22   5.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.1  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 401 LGHWYWHLLALPF 363
           L HW+WHL+  PF
Sbjct: 205 LHHWHWHLV-YPF 216


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 401 LGHWYWHLLALPF 363
           L HW+WHL+  PF
Sbjct: 205 LHHWHWHLV-YPF 216


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +3

Query: 630  WASTCRRTRYPMSRPRNWYTTNPNRASRNKQRTTTS 737
            W+ST     +  +  R   TT P   S   + TTT+
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTN 1078


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 638 NVPTDTLPDVPASELVHDKPKPSKSKQTEDDD 733
           NVP  T+P +P +E     P  S S   E  D
Sbjct: 205 NVPKPTVPKIPPAEF----PTTSSSSALESPD 232


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 257 VSWLSVLLNRSSFPKTLA 204
           +SW+S  LNR++ P  +A
Sbjct: 84  ISWVSFWLNRNATPARVA 101


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 447 TKTSMWTKYTISWMILLNNTISLVRSPRRSV 539
           TK++++   T+SW+ILL+  + L  S  ++V
Sbjct: 2   TKSTVYD--TVSWLILLSLLLGLYPSYLQTV 30


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 454 HRCGQSTRYHG*YC*T 501
           HRC  S  Y G YC T
Sbjct: 168 HRCHCSDGYSGSYCQT 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,283
Number of Sequences: 336
Number of extensions: 3858
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)