Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_C01
(833 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0717 + 23834965-23835051,23836760-23836859,23837685-238377... 88 9e-18
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 73 2e-13
11_01_0130 - 1079515-1079685,1079847-1079961,1080237-1080328,108... 62 5e-10
12_01_0133 - 1011442-1011609,1011792-1011906,1012188-1012279,101... 61 1e-09
01_01_0022 - 170045-170095,170406-170554,170764-170875,171398-17... 44 1e-04
05_01_0020 + 143273-143592,144278-144371,144466-144537,144675-14... 39 0.004
03_01_0340 - 2680860-2682197 35 0.069
06_03_0638 + 23026276-23026445,23027010-23027169 32 0.49
05_01_0488 - 4070506-4072277,4072455-4072557 31 1.5
04_01_0464 + 6006021-6006082,6006249-6006519 29 3.5
02_05_0794 + 31789186-31789330,31789613-31789755 29 4.6
08_01_0160 - 1277663-1277672,1277733-1277806,1278032-1278088,127... 28 8.0
>06_03_0717 +
23834965-23835051,23836760-23836859,23837685-23837770,
23837867-23837958,23838659-23838773,23838847-23839029
Length = 220
Score = 87.8 bits (208), Expect = 9e-18
Identities = 61/203 (30%), Positives = 89/203 (43%), Gaps = 1/203 (0%)
Frame = +2
Query: 149 TTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHG-TKNXXXXXXXXXXXXXYEKQL 325
T +I KL ET E+L KK+ L KK +LEV+ A+ KN YE+Q+
Sbjct: 19 TALASIDKLSETLEMLEKKENLLVKKANLEVEKAKTFTKAKNKRAAIQCLKRKRLYEQQI 78
Query: 326 TQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQH 505
Q+ +I Q LEGA + ++ +R A+AMK HK ++D V MD+I +
Sbjct: 79 EQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKATNIDDVDKTMDEINDNM 138
Query: 506 DISREITEAISNNVAFPNDIXXXXXXXXXXXXXXXXXXXXMLGINVPTDTLPDVPASELV 685
+ R+I + +S + D +L PT T P P V
Sbjct: 139 ENMRQIQDLLSAPIGAAADFDEDELEAELADLEGEELEAELL---APTTTAPTAPVR--V 193
Query: 686 HDKPKPSKSKQTEDDDELAXLQS 754
+PS +DDELA LQ+
Sbjct: 194 QQPTRPSAQSSKTEDDELAALQA 216
>09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 73.3 bits (172), Expect = 2e-13
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 2/199 (1%)
Frame = +2
Query: 164 IQKLRETEELLIKKQEFLEKKIDLEVQTARKHG-TKNXXXXXXXXXXXXXYEKQLTQIDG 340
+ KL ET ++L KK++ LEKK E++ A++ KN YE+Q+ Q+
Sbjct: 785 LDKLNETLDMLEKKEKVLEKKAAAELERAKEFSKAKNKRAAIQSLKRKKLYEQQIEQLGN 844
Query: 341 TLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDISRE 520
+I Q LE A + ++ +R A AMK K ++D V MD+I EQ + ++
Sbjct: 845 FQLRIHDQMIMLEAAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQ 904
Query: 521 ITEAISNNVAFPNDIXXXXXXXXXXXXXXXXXXXXML-GINVPTDTLPDVPASELVHDKP 697
I +A+S + D +L + P VP + +
Sbjct: 905 IQDALSAPLGASADFDEDELEAELEELEGAELESQLLEPVAAPPVHPVQVPGTRI---PT 961
Query: 698 KPSKSKQTEDDDELAXLQS 754
+P+ K + ++DELA LQ+
Sbjct: 962 RPAPQKASAEEDELAALQA 980
>11_01_0130 -
1079515-1079685,1079847-1079961,1080237-1080328,
1080435-1080520,1080957-1081056,1082180-1082210,
1082416-1082471
Length = 216
Score = 62.1 bits (144), Expect = 5e-10
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Frame = +2
Query: 179 ETEELLIKKQEFLEKKIDLEVQTARKH-GTKNXXXXXXXXXXXXXYEKQLTQIDGTLTQI 355
ET E+L KK+ FL+KK EV+ A+ + KN YE Q+ Q+ ++
Sbjct: 29 ETLEMLEKKECFLQKKASAEVEKAKDYTKAKNKSAAIQCLKKKKLYETQIEQLANFQLRV 88
Query: 356 EAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDISREITEAI 535
Q LE A ++ +R ++A+K H+ + +D + + +++ E + R+I EA+
Sbjct: 89 HDQIIMLESAKATTDTVDALRSGSSAVKAIHQSVSIDDIENAIEEANEHTENMRQIQEAL 148
Query: 536 SNNVAFPND 562
+ + D
Sbjct: 149 ATPIGASAD 157
>12_01_0133 -
1011442-1011609,1011792-1011906,1012188-1012279,
1012384-1012469,1012989-1013088,1014139-1014333
Length = 251
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Frame = +2
Query: 179 ETEELLIKKQEFLEKKIDLEVQTARKH-GTKNXXXXXXXXXXXXXYEKQLTQIDGTLTQI 355
+T E+L KK+ FL+KK EV+ A+ + KN YE Q+ Q+ ++
Sbjct: 65 QTLEMLEKKECFLQKKASAEVERAKDYTKAKNKSAAIQCLKKKKLYETQIEQLANFQLRV 124
Query: 356 EAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDISREITEAI 535
Q LE A ++ +R ++A+K H+ + +D + + +++ E + R+I EA+
Sbjct: 125 HDQIIMLESAKATTDTVDALRSGSSAVKAIHQSVSIDDIENAIEEANEHTENMRQIQEAL 184
Query: 536 SNNVAFPND 562
+ + D
Sbjct: 185 ATPIGASAD 193
>01_01_0022 -
170045-170095,170406-170554,170764-170875,171398-171469,
171578-171671,171770-171921,172004-172072
Length = 232
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/85 (22%), Positives = 42/85 (49%)
Frame = +2
Query: 311 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 490
YE+Q + ++ A +G Q +N M+ A +K K + ++ + ++ D+
Sbjct: 75 YEEQRNMLYNQTYNLDQVAFAADGLKDAQQTMNAMKAANKELKGMMKTVKIEDIDNMQDE 134
Query: 491 IAEQHDISREITEAISNNVAFPNDI 565
+ + D+S EI E++ + P+D+
Sbjct: 135 MTDLMDVSNEIQESLGRSYNIPDDV 159
>05_01_0020 +
143273-143592,144278-144371,144466-144537,144675-144786,
145179-145327,145484-145510,145931-145981
Length = 274
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +2
Query: 311 YEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDD 490
YE Q + ++ A EG Q + M+ A +K K + ++ + + D+
Sbjct: 108 YEGQRDMLYNQTYNLDQVAFASEGLKDAQQTMTAMKAANKELKGMMKTVKLEDIDSLQDE 167
Query: 491 IAEQHDISREITEAISNNVAFPNDI 565
+ + D+S EI E + + P+DI
Sbjct: 168 MMDLMDVSNEIQETLGRSYNVPDDI 192
>03_01_0340 - 2680860-2682197
Length = 445
Score = 35.1 bits (77), Expect = 0.069
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -1
Query: 779 PRPRPMWPTTAXEQAR--RRPLFVSTCSVWVCRVPVPRPG 666
PRPRP+ P A + A+ R+P F +C VCR PV G
Sbjct: 164 PRPRPVDPDGAGDNAQVERKPSFRRSCEWMVCREPVRGSG 203
>06_03_0638 + 23026276-23026445,23027010-23027169
Length = 109
Score = 32.3 bits (70), Expect = 0.49
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 785 GAPRPRPMWPTTAXEQARRR 726
G PRPR +WP T+ +ARRR
Sbjct: 11 GRPRPRTVWPMTSKTRARRR 30
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Frame = +2
Query: 320 QLTQIDGTLTQIEAQREALEGAN-TNAQVLNTMREA-ANAMK-----LAHKDIDVDKVHD 478
+ + + L ++++++EALE N ++ ++E+ +A K LAH+D ++DK
Sbjct: 229 ETSSLQKDLDEVKSEKEALEAVVLVNKDEIDRLKESMVSAAKQFEVELAHRDTEIDKCKQ 288
Query: 479 IMDDIAEQ--HDIS 514
++ ++E+ HDIS
Sbjct: 289 ELEVLSEKYLHDIS 302
>04_01_0464 + 6006021-6006082,6006249-6006519
Length = 110
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +1
Query: 670 GLGTGTRQTQTEQVETNRGRRRACSXAVVGHIGRGRGAPL 789
G G+GT Q TE RG R C V +G R A L
Sbjct: 57 GAGSGTEQGATEPGVAGRGELRRCPVLAVVDLGMWRRASL 96
>02_05_0794 + 31789186-31789330,31789613-31789755
Length = 95
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 353 IEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVH 475
+ + AL+ + A+ L ++R +NA LA + +D DK+H
Sbjct: 1 MSVETAALQLSGEKARALTSIRRYSNAPILAAQRLDTDKIH 41
>08_01_0160 -
1277663-1277672,1277733-1277806,1278032-1278088,
1278111-1278118,1279013-1279080,1279274-1279315,
1279720-1279881,1280903-1281117
Length = 211
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 668 PASELVHDKPKPSKSKQTEDDDELAXLQSWA 760
P SE+V P P K T D+E+A L+S+A
Sbjct: 151 PGSEIV---PGPQKDGYTRSDEEIALLESYA 178
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,933,174
Number of Sequences: 37544
Number of extensions: 425259
Number of successful extensions: 1372
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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