Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_C01
(833 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_55696| Best HMM Match : SNF7 (HMM E-Value=0) 154 1e-37
SB_55695| Best HMM Match : SNF7 (HMM E-Value=0) 154 1e-37
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 32 0.66
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_33651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_35902| Best HMM Match : DUF567 (HMM E-Value=9.7) 29 4.6
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 28 8.1
>SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 183 bits (446), Expect = 1e-46
Identities = 98/206 (47%), Positives = 127/206 (61%)
Frame = +2
Query: 146 PTTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKNXXXXXXXXXXXXXYEKQL 325
PTT EAIQKLR TEELL KK +FLEKKI+ E+Q A+++ +KN EKQL
Sbjct: 16 PTTQEAIQKLRSTEELLQKKSDFLEKKIENELQIAKQNASKNKRTALNALKRKKRLEKQL 75
Query: 326 TQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQH 505
QIDGTL+ IE QREALEGANTN +VL M AA A+K AH+ +DVD VHD+MDDI EQ
Sbjct: 76 NQIDGTLSTIEFQREALEGANTNTEVLKNMSYAAKALKAAHQQLDVDDVHDMMDDIQEQT 135
Query: 506 DISREITEAISNNVAFPNDIXXXXXXXXXXXXXXXXXXXXMLGINVPTDTLPDVPASELV 685
+++ EI+ AIS F DI +L I + LP VP +EL
Sbjct: 136 ELADEISRAISEPAGFGMDIDEDELNAELDELEQSEIDKQILDIGPTSTGLPSVPETEL- 194
Query: 686 HDKPKPSKSKQTEDDDELAXLQSWAT 763
+P+K+K+ +DD+LA L++WA+
Sbjct: 195 --PSRPAKAKKKTEDDDLAELEAWAS 218
>SB_55696| Best HMM Match : SNF7 (HMM E-Value=0)
Length = 225
Score = 154 bits (373), Expect = 1e-37
Identities = 84/202 (41%), Positives = 121/202 (59%)
Frame = +2
Query: 152 THEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKNXXXXXXXXXXXXXYEKQLTQ 331
T +AI KLRETE+LL KKQE+LE++I++E TA+ + KN EKQL+Q
Sbjct: 29 TQQAIWKLRETEKLLEKKQEYLEQRIEIETNTAKANVKKNKRIALQALKRKKRLEKQLSQ 88
Query: 332 IDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDI 511
IDGTL+ IE QR+ALE ++TN +V+ +M AANA+K HK +D+D VHD+MDD+ EQ +
Sbjct: 89 IDGTLSTIEFQRDALENSSTNTEVVKSMSFAANALKEVHKTLDIDDVHDVMDDVQEQAQL 148
Query: 512 SREITEAISNNVAFPNDIXXXXXXXXXXXXXXXXXXXXMLGINVPTDTLPDVPASELVHD 691
S EI++AI N DI ++ + P LP+VP+++L
Sbjct: 149 SDEISQAI--NFVGSQDIDESDIMSELAELEQEVIDKELIQVKKPGPRLPNVPSTKL--- 203
Query: 692 KPKPSKSKQTEDDDELAXLQSW 757
P K K++ D+DEL L++W
Sbjct: 204 -PAAQKKKRS-DEDELKELEAW 223
>SB_55695| Best HMM Match : SNF7 (HMM E-Value=0)
Length = 225
Score = 154 bits (373), Expect = 1e-37
Identities = 84/202 (41%), Positives = 121/202 (59%)
Frame = +2
Query: 152 THEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKNXXXXXXXXXXXXXYEKQLTQ 331
T +AI KLRETE+LL KKQE+LE++I++E TA+ + KN EKQL+Q
Sbjct: 29 TQQAIWKLRETEKLLEKKQEYLEQRIEIETNTAKANVKKNKRIALQALKRKKRLEKQLSQ 88
Query: 332 IDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDI 511
IDGTL+ IE QR+ALE ++TN +V+ +M AANA+K HK +D+D VHD+MDD+ EQ +
Sbjct: 89 IDGTLSTIEFQRDALENSSTNTEVVKSMSFAANALKEVHKTLDIDDVHDVMDDVQEQAQL 148
Query: 512 SREITEAISNNVAFPNDIXXXXXXXXXXXXXXXXXXXXMLGINVPTDTLPDVPASELVHD 691
S EI++AI N DI ++ + P LP+VP+++L
Sbjct: 149 SDEISQAI--NFVGSQDIDESDIMSELAELEQEVIDKELIQVKKPGPRLPNVPSTKL--- 203
Query: 692 KPKPSKSKQTEDDDELAXLQSW 757
P K K++ D+DEL L++W
Sbjct: 204 -PAAQKKKRS-DEDELKELEAW 223
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 31.9 bits (69), Expect = 0.66
Identities = 22/103 (21%), Positives = 41/103 (39%)
Frame = +2
Query: 146 PTTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKNXXXXXXXXXXXXXYEKQL 325
P + ++ L+E EL + E L + E Q ++ + + E+
Sbjct: 3059 PHLNNTVEGLQEALELERSRAEDLNNALAGERQKSKLNASMEAEKQLREQTDRLVAEQLR 3118
Query: 326 TQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKD 454
+ +DG Q+ ALEG A+ L R+ A + H++
Sbjct: 3119 SALDGVQKQLVDLTGALEGERHRARKLQNERDVQQATAMGHRE 3161
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.1 bits (67), Expect = 1.2
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Frame = +2
Query: 158 EAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKNXXXXXXXXXXXXXYEKQLTQID 337
E I+KL E EE I E +EKK+++ A G K E Q Q
Sbjct: 1805 ERIKKLIELEEKAI---ETMEKKLEIAEYAA---GLKYKKESLEKKCAELSAEIQNLQQS 1858
Query: 338 GTLTQIEAQR---EALEGANTNAQVLNTMREAANAMKLAHKDIDVDKV 472
+T + R E + TNA+ + E NA+++ +DI+V KV
Sbjct: 1859 RDVTAADKSRINDEVCQLKLTNAKTEADLAETRNALRIEKQDIEVLKV 1906
>SB_33651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 344 LTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDI-DVDKVHDIMDDIAEQHDISRE 520
LT+I + L + N+Q L + +++ + HK+ ++ ++H ++ H S+E
Sbjct: 117 LTRIHKNSQELTRIHKNSQELTRIHKSSQELTRIHKNSQELTRIHKNSQELTRIHKNSQE 176
Query: 521 ITEAISNN 544
+T N+
Sbjct: 177 LTRIHKNS 184
>SB_35902| Best HMM Match : DUF567 (HMM E-Value=9.7)
Length = 205
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 261 PCFLAVCTSKSIFFSKNSCFLISNSSVSRSFWIASC 154
PCF S S+ F SCF + S S F + SC
Sbjct: 106 PCFRFARVSGSLVFQVRSCFRFARVSGSLVFQVRSC 141
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 261 PCFLAVCTSKSIFFSKNSCFLISNSSVSRSFWIASC 154
PCF S S+ F SCF + S S F + SC
Sbjct: 157 PCFRFARVSGSLVFQVRSCFRFARVSGSLVFQVRSC 192
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +2
Query: 329 QIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHD 508
Q+ G +E + E + ++T+ + A+ KL+ DV+ + MDD+ E
Sbjct: 4053 QVQGLEAAVEQMGKLQESLKNTDEAISTVEKKAD--KLSPVGTDVETIEQQMDDLKELQK 4110
Query: 509 ISREITEAISN 541
+I E I++
Sbjct: 4111 EVEDIDELIAD 4121
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +2
Query: 323 LTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQ 502
L + + +E + + L NTN + + A A D + D+V+ + +I
Sbjct: 465 LEKSENARDDLEREVDGLRSKNTNLEAQLAAAQKAKMQLKADLDAEKDRVNQLRKEIV-- 522
Query: 503 HDISREITEAISNNVAFPND 562
+ +++EA N F ND
Sbjct: 523 -GLQAQLSEAQRNAEKFKND 541
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,762,227
Number of Sequences: 59808
Number of extensions: 473555
Number of successful extensions: 1558
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2347493764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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