Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_B21
(891 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10 |Schizo... 221 1e-58
SPBC887.13c |||3-oxoacyl-[acyl-carrier-protein]-synthase |Schizo... 31 0.29
SPAC1687.04 |||conserved eukaryotic protein|Schizosaccharomyces ... 29 1.2
SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces... 27 3.6
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 27 3.6
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 26 6.3
SPBC29A3.05 |||chromatin remodeling complex subunit|Schizosaccha... 26 6.3
SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1 |Sc... 26 8.3
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 26 8.3
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 26 8.3
>SPBC215.09c |erg10||acetyl-CoA C-acetyltransferase Erg10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 221 bits (539), Expect = 1e-58
Identities = 115/240 (47%), Positives = 149/240 (62%), Gaps = 3/240 (1%)
Frame = +3
Query: 132 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 311
EV I SAVRTPM + A+ER I ++ EV++GNV SANLG
Sbjct: 5 EVYIVSAVRTPMGSFGGSFASLPATKLGSIAIKGALERVNIKPSDVDEVFMGNVVSANLG 64
Query: 312 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 491
Q PARQ + AGLP+S +CTTVNKVCASGMK+ +L AQ + TG +I++AGG ESMSN P
Sbjct: 65 QNPARQCALGAGLPRSIVCTTVNKVCASGMKATILGAQTIMTGNAEIVVAGGTESMSNAP 124
Query: 492 FYLKRGE--TSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNS 665
+Y + YG ++LVDG++ DGL+D Y+ MGN AE A++ I R QD +A++S
Sbjct: 125 YYAPKNRFGAKYGNVELVDGLLRDGLSDAYDGLPMGNAAELCAEEHSIDRASQDAFAISS 184
Query: 666 YKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAEDEEYKRVNFEKFTKLSTVFQKENGT 842
YKR+ A KAF E+VPV VP RG P + EDEE K +N +K + VF K NGT
Sbjct: 185 YKRAQNAQATKAFEQEIVPVEVPVGRGKPNKLVTEDEEPKNLNEDKLKSVRAVF-KSNGT 243
Score = 29.5 bits (63), Expect = 0.67
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +1
Query: 772 KSIKELILKSLQNCLRYSKRKMALVTAGNASTLNDGAAXL 891
K++ E LKS++ + + VTA NASTLNDGA+ L
Sbjct: 224 KNLNEDKLKSVRAVFKSN----GTVTAANASTLNDGASAL 259
>SPBC887.13c |||3-oxoacyl-[acyl-carrier-protein]-synthase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 372 TVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSN 485
T CA+G +I A ++ G D+I+AGG ES N
Sbjct: 165 TTTTACAAGCHAIGDAFNFIKLGHADVIIAGGSESCIN 202
>SPAC1687.04 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +3
Query: 690 EAKAFVDE---LVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTGYCRQC 860
E+K +DE L VP +R PVI A E+ K S Q N TG C +C
Sbjct: 117 ESKIVLDERYSLFLTNVPGERTLPVIEALGNWGSESLKERSLKYSNRLQASNDTGVCVKC 176
Query: 861 F 863
+
Sbjct: 177 Y 177
>SPBC660.07 |ntp1||alpha,alpha-trehalase Ntp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 735
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 172 EPIGVLTADAITTSLRETLVENAAIAVNICNKTLKSNKTMFLL 44
E +G+L D + L + +VEN + K L +N+T +LL
Sbjct: 295 ESLGLLVDDRV--DLAKGMVENFIFEITYYGKILNANRTYYLL 335
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 31 WLLCPTETSSYWTLTSYCRYLQ 96
W+L P ETS+Y +TS Y+Q
Sbjct: 143 WVLMPLETSAYSLVTSTPAYIQ 164
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 26.2 bits (55), Expect = 6.3
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 639 DQDEYAVNSYKRSAAAYEA-KAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEK 800
++ +YA +S + A YE K + L+ +PV Q VIF + Y RV EK
Sbjct: 208 NESDYA-SSQQLLADIYEIFKYSITSLLQIPVSQLSQYSVIFIVPDLYDRVYVEK 261
>SPBC29A3.05 |||chromatin remodeling complex
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 139
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 332 CNICRFAKKYHMYNCKQSMC 391
CN+C + KY NC S C
Sbjct: 102 CNVCGYWGKYACQNCGTSYC 121
>SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 899
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 151 ADAITTSLRETL-VENAAIAVNICNKTLKSNKTMFLLD 41
++ I S+R T+ +E A +A +CN + NK +LD
Sbjct: 358 SEHIELSVRRTVGIEKALLAAALCNNSKVHNKADSILD 395
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 809 FCKLFKINSFILFIFSKYYRSPSFLWNGYWY 717
F KLF+I+ +IL +FS Y F W W+
Sbjct: 73 FSKLFRISLYILGVFSLY----MFRWAIAWF 99
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 568 MCTTNFTWEIVLKTQQKNYKLLDKIKMNMLSIVTREV 678
+ + + W + KT++ YKL+ M + S+V E+
Sbjct: 409 IAASGYVWHVGSKTERSRYKLMLDCVMIITSVVPSEL 445
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,471,459
Number of Sequences: 5004
Number of extensions: 71459
Number of successful extensions: 255
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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