Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_B21
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 263 1e-70
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 194 5e-50
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 125 5e-29
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 119 3e-27
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 83 3e-16
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 38 0.010
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 38 0.010
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 31 1.5
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical ... 29 3.4
U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical p... 29 4.5
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 29 4.5
Z92804-5|CAD89722.2| 320|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 263 bits (644), Expect = 1e-70
Identities = 127/241 (52%), Positives = 163/241 (67%)
Frame = +3
Query: 111 STKVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGN 290
S +S I A RTP+ + AA+ER + I+EV++G
Sbjct: 16 SAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQ 75
Query: 291 VCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGM 470
VC AN GQAPARQA + AGL S TTVNKVC+SG+K+I+LAAQ +QTG QD + GGM
Sbjct: 76 VCQANAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGM 135
Query: 471 ESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDE 650
ESMS VPFY++RGE YGG Q++DGIV DGLTD Y+K HMGNC E T+K++ ITR+DQDE
Sbjct: 136 ESMSQVPFYVQRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDE 195
Query: 651 YAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQK 830
YA+NSYK+SA A+E E+VPV V K+G ++ +DEE+ +VNF+KFT L TVFQK
Sbjct: 196 YAINSYKKSAKAWENGNIGPEVVPVNVKSKKGVTIV-DKDEEFTKVNFDKFTSLRTVFQK 254
Query: 831 E 833
+
Sbjct: 255 D 255
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 814 LRYSKRKMALVTAGNASTLNDGAA 885
LR +K +TA NASTLNDGAA
Sbjct: 248 LRTVFQKDGTITAANASTLNDGAA 271
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 194 bits (474), Expect = 5e-50
Identities = 106/242 (43%), Positives = 145/242 (59%)
Frame = +3
Query: 120 VSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCS 299
+S +V I S RTP+ AAIER+G+ E+I+EV G V
Sbjct: 1 MSDKKVFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLP 60
Query: 300 ANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESM 479
A LGQ RQ + AGLP +T TVNKVC+S MK+++ AA ++ G D IL G E+M
Sbjct: 61 AGLGQNVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENM 120
Query: 480 SNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 659
S VPFY+ RGE +GG+Q+ DGI DGL D+ K MG CAE T K ITR++QD YA+
Sbjct: 121 SQVPFYVPRGEIPFGGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQDAYAI 180
Query: 660 NSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENG 839
SYK+++ A+ ++ F +E+VPV V R + V+ EDEEYK++ K + L VF ++ G
Sbjct: 181 ESYKKASNAWSSEKFSEEVVPVSVKTSR-SEVVITEDEEYKKLIESKVSSLKPVFVRD-G 238
Query: 840 TG 845
TG
Sbjct: 239 TG 240
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 125 bits (301), Expect = 5e-29
Identities = 77/188 (40%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Frame = +3
Query: 24 EIVVTVSNRNIVLLDFNVLLQIFTAMAAFSTKVSLNEVVIASAVRTPMXXXXXXXXXXXX 203
EI+ ++ LD + + + T AA S K + I A RTP+
Sbjct: 69 EIMSRYFKAKMLSLDGHAIGRGITTSAALSNK----DAFIVGAARTPIGSFRSSLSSVTA 124
Query: 204 XXXXXXXVNAAIERAGIPKEEIKE--VYIGNVCSANLGQAPARQAVIFAGLPKSTICTTV 377
+ AA+ER + I+E V++G VC AN GQA ARQA + AGL S TTV
Sbjct: 125 PELASVAIKAALERGAVKPSSIQEANVFLGQVCHANAGQASARQAALGAGLDLSVAVTTV 184
Query: 378 NKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVDGIVFD 557
NK +SGMK+I+LAAQ +QTG QD+ + GGMESMS VPF+L R E S Q V+ V D
Sbjct: 185 NKGWSSGMKAIILAAQQIQTGHQDLAIGGGMESMSQVPFFLARVEQSSNKYQ-VEQTVQD 243
Query: 558 GLTDVYNK 581
G++D ++K
Sbjct: 244 GISDFFDK 251
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 119 bits (286), Expect = 3e-27
Identities = 68/204 (33%), Positives = 114/204 (55%), Gaps = 3/204 (1%)
Frame = +3
Query: 231 AAIERAGIPKEEIKEVYIGNV-CSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKS 407
AA++ A + + + V GNV S+ G +R + +G+P++ TVN++C SG ++
Sbjct: 38 AALKHANVGADAVDHVIFGNVVASSRDGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQA 97
Query: 408 IMLAAQGLQTGAQDIILAGGMESMSNVPFYLK--RGETSYGGMQLVDGIVFDGLTDVYNK 581
++ AAQ ++ G +I+LAGG E+MS VPF ++ R T+ G + +++D L+D Y K
Sbjct: 98 VVNAAQAIKLGESNIVLAGGTENMSMVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAK 157
Query: 582 FHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIF 761
MG AE + ++TRQ+ DE+A+ S A EA + +E+V + + ++G F
Sbjct: 158 LAMGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQEAGVYKNEIVGITIKGRKGEE-SF 216
Query: 762 AEDEEYKRVNFEKFTKLSTVFQKE 833
DE + E KL VFQK+
Sbjct: 217 EIDEHPRATTAESLAKLKPVFQKD 240
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 83.0 bits (196), Expect = 3e-16
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 19/269 (7%)
Frame = +3
Query: 93 TAMAAFST-KVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEI 269
TA AA + K ++ +V+ AVRTP + A +E+ +P E++
Sbjct: 11 TARAASAVAKKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQL 70
Query: 270 KEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQD 449
+ G V AR+A + AG+P TV C S ++ L TG +
Sbjct: 71 DHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNAN 130
Query: 450 IILAGGMESMSNVPF-YLKRGETSYGGM--------------QLVDGIV---FDGLTDVY 575
I+AGG+E +S+VP Y + + GM Q+V ++ + +
Sbjct: 131 AIIAGGVELLSDVPIRYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFS 190
Query: 576 NKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPV 755
MG+ + A ++R++QDE+A+ S+ ++ A + F D +VPV + K+ P
Sbjct: 191 TGETMGHSGDRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKK--PK 247
Query: 756 IFAEDEEYKRVNFEKFTKLSTVFQKENGT 842
ED + EK + L F K +GT
Sbjct: 248 TIKEDNGIRVSTLEKLSSLKPAFVKPHGT 276
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 225 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 404
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 405 SIMLAAQGLQTGAQDIILAGGMESMS 482
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 225 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 404
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 405 SIMLAAQGLQTGAQDIILAGGMESMS 482
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Frame = +3
Query: 603 ENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYK 782
+N+ +K I ++ N + AA ++ V +L P P+KRG P+ A++ E
Sbjct: 171 QNSEEKALIQQEAVKGEPKNRGRPCGAAERSREVVKKLQKQP-PRKRGRPLKIAKNME-P 228
Query: 783 RVNFEKFTKLSTV-----FQKENGTGYCRQC 860
+N +K TK V +NGT C +C
Sbjct: 229 EINQKKDTKQVHVCPICTLASKNGTCLCTKC 259
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +2
Query: 293 LFCKFG-PSTCK-TSCNICRFAKKYHMYNCKQ--SMCLWH----EIYNVGSTRSTNWSPR 448
L C +G PS + T NI + H ++CK C ++ YN+ ST+ W+ R
Sbjct: 182 LNCIYGYPSVFRITRGNIVELLELSHFFDCKNVTMFCEYNLCNDTCYNIRSTQKMEWAIR 241
Query: 449 YN 454
YN
Sbjct: 242 YN 243
>AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical
protein C43H8.1 protein.
Length = 155
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 537 VDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 659
+DG++F L + N FH C AK+++I R D+ ++ +
Sbjct: 72 LDGLLFQFLDEALNSFHAEPCF--VAKRVEILRFDKKKFEI 110
>U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical
protein C16A3.1b protein.
Length = 686
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 633 RQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKL 812
R++ A +R AA A A P P P K PV+F+++ + + TK
Sbjct: 15 REEAIRRAAAYREREMAAANATASTSSAAP-PAPPKPVIPVMFSQNRQPMKPTMNNSTKQ 73
Query: 813 STV 821
ST+
Sbjct: 74 STI 76
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 329 SCNICRFAKKYHMYNCKQSMCLWHEI 406
+C++ R A KY+ Y +QS LW I
Sbjct: 15 ACSLRRMANKYYPYTMRQSFPLWTSI 40
>Z92804-5|CAD89722.2| 320|Caenorhabditis elegans Hypothetical
protein K05D4.8 protein.
Length = 320
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 782 FILFIFSKYYRSPSFLWNGYWY 717
F+L I SK+ P FL+NG W+
Sbjct: 230 FLLIIASKFIYIPIFLFNGDWF 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,402,242
Number of Sequences: 27780
Number of extensions: 415430
Number of successful extensions: 1313
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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