Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_B20
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 59 3e-09
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 48 6e-06
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 41 0.001
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 38 0.009
Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein. 37 0.016
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 36 0.037
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 35 0.049
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 35 0.064
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 31 0.60
Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical pr... 31 1.0
U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical pr... 31 1.0
AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical ... 31 1.0
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 29 3.2
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical ... 28 5.6
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 28 7.4
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 28 7.4
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 9.8
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical ... 27 9.8
AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical ... 27 9.8
AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Frame = +3
Query: 246 VKDLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXX 425
V D+L P + +V+G++ ++ FLGCCGAIRE++C+ V++A
Sbjct: 41 VLDILGDERLATPILLLVIGSLCTLLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAV 100
Query: 426 XXXFTYGESIKESIMDGVGVLFKKRSDXXXXXXXXXVXSELQRQFECCGNTGAINYGQF- 602
+ +S + I + + + + +L FECCG T + ++ F
Sbjct: 101 IIGYALHDSFRLGIGNQLQTGMVRYHESRGVESAWDKTHQL---FECCGVTNSSDWLTFT 157
Query: 603 XLPXSCCVKK 632
+P SCC+++
Sbjct: 158 TIPDSCCIEE 167
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Frame = +3
Query: 285 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 464
+I IV+GAVM V+A LGCCG S ++ Y+ + +
Sbjct: 115 YIIIVLGAVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVE 174
Query: 465 IMDGVGVLFKKRSDXXXXXXXXXVXSELQRQFECCGNTGAINYGQF--XLPXSCCVK 629
+ D + + + LQ F CCGN G ++ F +P SC ++
Sbjct: 175 LSDALNYMVQHYYQGPGVVQES--LDHLQTAFRCCGNAGCSDFRVFRQDIPRSCDIR 229
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/98 (27%), Positives = 38/98 (38%)
Frame = +3
Query: 285 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 464
WI + VGA++F++ F GCCGA ES ++ + T E S
Sbjct: 69 WILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSS 128
Query: 465 IMDGVGVLFKKRSDXXXXXXXXXVXSELQRQFECCGNT 578
I + KK S +Q F+CCG T
Sbjct: 129 IQQ----VLKKSSATYELRKN---IKPIQNVFQCCGAT 159
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 3/111 (2%)
Frame = +3
Query: 270 LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGE 449
L ++ +V G ++ FLG CGA+ S +++ + Y +
Sbjct: 23 LKASAYVSLVCGCAQLLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKD 82
Query: 450 ---SIKESIMDGVGVLFKKRSDXXXXXXXXXVXSELQRQFECCGNTGAINY 593
S+KE++ + V + + +LQ +CCG+ G +Y
Sbjct: 83 KVYSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDY 133
>Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein.
Length = 395
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 285 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 383
+I IV+GAVM V+A GCCG S ++ Y+
Sbjct: 226 YIXIVLGAVMMVVAMXGCCGITGRSRPFLIIYS 258
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 35.5 bits (78), Expect = 0.037
Identities = 19/96 (19%), Positives = 34/96 (35%)
Frame = +3
Query: 285 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKES 464
W + GA++ ++ + GC GA + + C + + F E IK
Sbjct: 58 WFLVGAGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHY 117
Query: 465 IMDGVGVLFKKRSDXXXXXXXXXVXSELQRQFECCG 572
+ + + R +Q +FECCG
Sbjct: 118 VESSMYDTIRNR--YSSETAFKDAFDTVQEKFECCG 151
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 285 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 383
++ V G ++ V+AFLGCCGA +E ++ Y+
Sbjct: 84 YLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYS 116
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 34.7 bits (76), Expect = 0.064
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 285 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 383
W ++VG + F+I F GC G++RE+ + Y+
Sbjct: 86 WPLLIVGFLTFIIGFSGCVGSLRENTSFLTFYS 118
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 31.5 bits (68), Expect = 0.60
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 481 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ--*LSRIAPQHPKNAITNIT 308
PTPS M S +P + T T TM T TTM+ + P K+ T T
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 212
Query: 307 APTTMK 290
PTTMK
Sbjct: 213 TPTTMK 218
Score = 27.9 bits (59), Expect = 7.4
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = -1
Query: 493 LNNTPT-PSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAIT 317
+ +TPT P+ ++ +P T T TM T TTM+ + P K+ T
Sbjct: 357 MKSTPTTPTTPTTMKSTP----TTPTTPTTMKSTPTTPTTPTTMK-STPTTPTTMKSTPT 411
Query: 316 NITAPTTMKIHGPTARWVFSKSLTMVQFIRNAXPIPTSSRPRS 188
T PTTMK PT + T ++++ PT+ + S
Sbjct: 412 TPTTPTTMK-STPTTPTTMKSTPTTPSTMKSSPTTPTTMKTSS 453
>Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical
protein C54D10.4 protein.
Length = 408
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 534 VXSELQRQFECCGNTGAINYGQF 602
+ +QR++ CCG GAI+YG F
Sbjct: 276 IADRVQRRYCCCGYNGAIDYGFF 298
>U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical
protein F01G12.1 protein.
Length = 178
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = -3
Query: 608 QXELAVVDSASVTAAFELSLQFRXNSLGGLVCVSVRSLFE*HADAIHNALLDALAVGEEE 429
Q E A+ + +L+L + SL ++ SVR+ E H + LD +
Sbjct: 37 QIENALSEIVGDQPPHDLTLNHKEESLYDMLVASVRAGRESHFELDQ---LDVHTETNQS 93
Query: 428 DADHHLHN-DDHQQKDCVRDDH 366
DHH+HN ++H+ + DH
Sbjct: 94 GHDHHIHNNEEHKHHNMRSHDH 115
>AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical
protein Y37E3.1 protein.
Length = 402
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 322 ITNITAPTTMKIHGPTARWVFSKSLTMVQFIRNAXPIPTSSRPRS-AXTRLK 170
I N+T P+ +IH + +W+ + T Q +N P+P S R+ A T+ K
Sbjct: 353 IKNLTIPSDPEIHVDSVKWI--RVATPTQMKKNGVPLPESVLARAVASTQTK 402
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 246 VKDLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 380
VK ++T + V WI I +I F+G GA+ S ++ Y
Sbjct: 59 VKSDIRTGIIVSFWIIIGFAIANVIIGFVGVIGAVIRSKYLLAPY 103
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 434 EEDADHHLHNDDHQQKDCVRDDH 366
EE DHH H+ DH + +R +H
Sbjct: 45 EELHDHHEHDHDHHDEQLIRKNH 67
>AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.1 protein.
Length = 487
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +2
Query: 287 DLHSRRGCNVRDRVLGMLWSDTRE-SLHGRHVRNLFAGD 400
D R+ N R +LG W D RE ++ GR F GD
Sbjct: 9 DTFLRKDINTRQIILGSFWRDEREQNVDGRFAVIHFLGD 47
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 308 CNVRDRVLGMLWSDTRESLHGRHVR--NLFAGDHHCASGDQRPPLHLRREHQGEHYGWRR 481
C V+D V G+L +D +E + G H R L A + +R ++ H+ + R
Sbjct: 219 CRVQD-VSGLLPNDLKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARN 277
Query: 482 RVIQK 496
+ ++K
Sbjct: 278 KALKK 282
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 308 CNVRDRVLGMLWSDTRESLHGRHVR--NLFAGDHHCASGDQRPPLHLRREHQGEHYGWRR 481
C V+D V G+L +D +E + G H R L A + +R ++ H+ + R
Sbjct: 219 CRVQD-VSGLLPNDLKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARN 277
Query: 482 RVIQK 496
+ ++K
Sbjct: 278 KALKK 282
>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 HADAIHNALLDALAVGEEEDADHHLHNDDHQQKDCVRDDHA--VTLAYRSTASQERDHEH 312
HA I + A+A EED L ND++ A V +YR ++E +H
Sbjct: 303 HATIIEQMVAGAIA--SEEDILRFLENDEYNSVTATYYLLAERVLASYREEQARELLAKH 360
Query: 311 YSPDDYEDPRTDS 273
DD DP +D+
Sbjct: 361 VEWDDRPDPISDN 373
>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
protein ZK524.4 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 HADAIHNALLDALAVGEEEDADHHLHNDDHQQKDCVRDDHA--VTLAYRSTASQERDHEH 312
HA I + A+A EED L ND++ A V +YR ++E +H
Sbjct: 303 HATIIEQMVAGAIA--SEEDILRFLENDEYNSVTATYYLLAERVLASYREEQARELLAKH 360
Query: 311 YSPDDYEDPRTDS 273
DD DP +D+
Sbjct: 361 VEWDDRPDPISDN 373
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -3
Query: 404 DDHQQKDCVRDDHAVTLAYRSTASQERDHEHYSPDDYEDP 285
+D ++KD R+DH +S ++ +HE + P + P
Sbjct: 502 EDGREKDDFREDHGREDHGKSEVPEKVEHEQHPPQSHGSP 541
>AF067624-4|AAM15592.1| 644|Caenorhabditis elegans Hypothetical
protein M01B12.4b protein.
Length = 644
Score = 27.5 bits (58), Expect = 9.8
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = -1
Query: 379 YVTTMQ*LSRIAPQHPKNAITN---ITAPTTMKIHGPTARWVFSKSLTMVQFIRNAXPIP 209
YVT+ +R A K A + + T ++ PT+R S LTM Q R A
Sbjct: 180 YVTSSAPSTRQAKSISKPAAVTTKKVGSMMTQSVYTPTSRPATSSRLTMKQPARGAS--T 237
Query: 208 TSSRPRSAXTRLKKNSTYFTKLVPHPMLRALFF 110
+++RP +A N + P PM R L F
Sbjct: 238 SAARPNTATPSSSNNRRSMDQRKP-PMPRKLPF 269
>AF067624-3|AAM81100.2| 678|Caenorhabditis elegans Hypothetical
protein M01B12.4c protein.
Length = 678
Score = 27.5 bits (58), Expect = 9.8
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = -1
Query: 379 YVTTMQ*LSRIAPQHPKNAITN---ITAPTTMKIHGPTARWVFSKSLTMVQFIRNAXPIP 209
YVT+ +R A K A + + T ++ PT+R S LTM Q R A
Sbjct: 170 YVTSSAPSTRQAKSISKPAAVTTKKVGSMMTQSVYTPTSRPATSSRLTMKQPARGAS--T 227
Query: 208 TSSRPRSAXTRLKKNSTYFTKLVPHPMLRALFF 110
+++RP +A N + P PM R L F
Sbjct: 228 SAARPNTATPSSSNNRRSMDQRKP-PMPRKLPF 259
>AF067624-2|AAC17562.3| 634|Caenorhabditis elegans Hypothetical
protein M01B12.4a protein.
Length = 634
Score = 27.5 bits (58), Expect = 9.8
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = -1
Query: 379 YVTTMQ*LSRIAPQHPKNAITN---ITAPTTMKIHGPTARWVFSKSLTMVQFIRNAXPIP 209
YVT+ +R A K A + + T ++ PT+R S LTM Q R A
Sbjct: 170 YVTSSAPSTRQAKSISKPAAVTTKKVGSMMTQSVYTPTSRPATSSRLTMKQPARGAS--T 227
Query: 208 TSSRPRSAXTRLKKNSTYFTKLVPHPMLRALFF 110
+++RP +A N + P PM R L F
Sbjct: 228 SAARPNTATPSSSNNRRSMDQRKP-PMPRKLPF 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,390,361
Number of Sequences: 27780
Number of extensions: 250661
Number of successful extensions: 818
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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