Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_B18
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 104 6e-23
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 104 6e-23
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 75 4e-14
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 75 4e-14
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 74 9e-14
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 71 8e-13
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 54 1e-07
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 54 1e-07
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 52 3e-07
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 51 7e-07
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 51 7e-07
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 51 1e-06
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 48 7e-06
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 43 2e-04
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 36 0.022
U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light c... 35 0.051
AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical ... 33 0.16
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 32 0.36
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 32 0.36
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 32 0.36
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 32 0.36
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 31 1.1
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 29 2.5
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.4
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical ... 29 3.4
AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical ... 29 4.4
Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical p... 28 5.9
Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical pr... 28 5.9
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 104 bits (250), Expect = 6e-23
Identities = 58/137 (42%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +1
Query: 76 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX--FLPIYSQ 249
F++YD E GKID +GD+ RA PT A + +LP+Y Q
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQ 72
Query: 250 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 429
K+K+QG Y DF E LK++DK E G +L AEL H LLALGE+L E E+ K E
Sbjct: 73 LAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLKGV---E 129
Query: 430 DDDGMIPYAAFLKKVMA 480
D +GM+ Y F+KKV+A
Sbjct: 130 DGEGMVKYEDFIKKVLA 146
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 104 bits (250), Expect = 6e-23
Identities = 58/137 (42%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Frame = +1
Query: 76 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX--FLPIYSQ 249
F++YD E GKID +GD+ RA PT A + +LP+Y Q
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQ 72
Query: 250 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 429
K+K+QG Y DF E LK++DK E G +L AEL H LLALGE+L E E+ K E
Sbjct: 73 LAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLKGV---E 129
Query: 430 DDDGMIPYAAFLKKVMA 480
D +GM+ Y F+KKV+A
Sbjct: 130 DGEGMVKYEDFIKKVLA 146
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 75.4 bits (177), Expect = 4e-14
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Frame = +1
Query: 31 MSD-LSKXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 207
M+D L++ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 208 XXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 384
FL + A+K KD + E+ E +++DK+ NG + AEL H + LGEKL
Sbjct: 61 NGTIDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 118
Query: 385 DSEVAEVTKDCMDPEDDDGMIPYAAFL 465
D EV E+ ++ D DG + Y F+
Sbjct: 119 DEEVDEMIREA--DIDGDGQVNYEEFV 143
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 75.4 bits (177), Expect = 4e-14
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Frame = +1
Query: 31 MSD-LSKXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 207
M+D L++ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 208 XXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 384
FL + A+K KD + E+ E +++DK+ NG + AEL H + LGEKL
Sbjct: 61 NGTIDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 118
Query: 385 DSEVAEVTKDCMDPEDDDGMIPYAAFL 465
D EV E+ ++ D DG + Y F+
Sbjct: 119 DEEVDEMIREA--DIDGDGQVNYEEFV 143
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 74.1 bits (174), Expect = 9e-14
Identities = 43/134 (32%), Positives = 68/134 (50%)
Frame = +1
Query: 76 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAK 255
F+ +D +G +I +GD+LRAL NPT A I F+PI+
Sbjct: 11 FAYFDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFED-FVPIFQSVS 69
Query: 256 KDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDD 435
K++++ E+F+E L +DK NG++ AEL H L LGE+L D +V ++ D
Sbjct: 70 KNREKHTVEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSDEDVDQLLS---GHNDS 126
Query: 436 DGMIPYAAFLKKVM 477
G + + F++ VM
Sbjct: 127 HGNVNISDFVRAVM 140
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 70.9 bits (166), Expect = 8e-13
Identities = 41/142 (28%), Positives = 70/142 (49%)
Frame = +1
Query: 52 DVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXF 231
++E F ++D +G GKIDA + ++LR+L+ NP + + F
Sbjct: 6 NMEECREVFMLFDKKGDGKIDAAQVFEVLRSLDENPKNSDVHQCLAKFDKTARISFEN-F 64
Query: 232 LPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTK 411
LP+ S + +K + EDF++ L +DK G + AEL L +G+KL D E ++
Sbjct: 65 LPVLSHVRNNKIPYSMEDFIKGLSHFDKEGEGFITSAELRQVLTTMGDKLSDEEFDKLVA 124
Query: 412 DCMDPEDDDGMIPYAAFLKKVM 477
++D+G I F+K +M
Sbjct: 125 G----QEDNGKIKIETFVKTIM 142
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Frame = +1
Query: 31 MSDLSKXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI-XXXXXXXXXXX 207
+ L+ +++ AF ++D +G G I LG +R+L NPT I
Sbjct: 72 IKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGN 131
Query: 208 XXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDD 387
F + + K+ D E E +++DK+ NG++ E + ++ +G + +
Sbjct: 132 GQIEFPEFCVMMKRMMKETDS---EMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSE 188
Query: 388 SEVAEVTKDCMDPEDDDGMIPYAAFLK 468
EV E+ K+ D DG I Y F+K
Sbjct: 189 EEVDEMIKEV--DVDGDGEIDYEEFVK 213
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Frame = +1
Query: 31 MSDLSKXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI-XXXXXXXXXXX 207
+ L+ +++ AF ++D +G G I LG +R+L NPT I
Sbjct: 15 IKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGN 74
Query: 208 XXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDD 387
F + + K+ D E E +++DK+ NG++ E + ++ +G + +
Sbjct: 75 GQIEFPEFCVMMKRMMKETDS---EMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSE 131
Query: 388 SEVAEVTKDCMDPEDDDGMIPYAAFLK 468
EV E+ K+ D DG I Y F+K
Sbjct: 132 EEVDEMIKEV--DVDGDGEIDYEEFVK 156
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Frame = +1
Query: 40 LSKXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT-LATIXXXXXXXXXXXXXX 216
L++ ++ AF ++D +G G I + LG +R+L NPT +
Sbjct: 29 LNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTI 88
Query: 217 XXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEV 396
F + + K+ D E E +++D++ NG + E + + +G++ D EV
Sbjct: 89 DFGEFCQMMKRMNKENDS---EMIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQEV 145
Query: 397 AEVTKDCMDPEDDDGMIPYAAF 462
E+ + D DG I Y F
Sbjct: 146 DEIIAEI--DIDGDGQIDYEEF 165
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 52.4 bits (120), Expect = 3e-07
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Frame = +1
Query: 40 LSKXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT-LATIXXXXXXXXXXXXXX 216
L++ ++ AF ++D +G G I + LG +R+L NPT +
Sbjct: 29 LNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTI 88
Query: 217 XXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEV 396
F + + K+ D E E +++D++ NG + E + + +G++ D EV
Sbjct: 89 DFGEFCQMMKRMNKENDS---EMIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQEV 145
Query: 397 AEVTKDCMDPEDDDGMIPYAAF 462
E+ + D DG I Y F
Sbjct: 146 DEIIAEI--DIDGDGQIDYEEF 165
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 51.2 bits (117), Expect = 7e-07
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Frame = +1
Query: 4 GGNRQTPHKMSDLSKXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXX 183
G N+ + + +++ + AF ++D +G ++ LG+ +R L NPT +
Sbjct: 5 GTNQSVCSDADEFTPEELQEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNM 64
Query: 184 XXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTL 360
F + + K+ DQ E K++DK+ NG + E H +
Sbjct: 65 VNEYDVDGNGKIDFGEFCKMMKEMNKETDQ---ELIRLAFKVFDKDGNGYITAQEFKHFM 121
Query: 361 LALGEKLDDSEVAEVTKDCMDPEDDD 438
+GE+ + EV E+ ++ +D + D+
Sbjct: 122 TTMGERFSEEEVDEIIRE-VDKDGDE 146
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 51.2 bits (117), Expect = 7e-07
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +1
Query: 250 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 429
A+K K + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 23 ARKMKGTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 80
Query: 430 DDDGMIPYAAF 462
D DG I +F
Sbjct: 81 DGDGQIMRVSF 91
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 50.8 bits (116), Expect = 1e-06
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Frame = +1
Query: 31 MSDLSKXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT-LATIXXXXXXXXXXX 207
+S L++ ++ AF ++D +G G I LG +RAL NPT +
Sbjct: 20 ISQLTEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDVDLDGN 79
Query: 208 XXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDD 387
F + + K+ D E E K++D++ NG++ E ++ +G D+
Sbjct: 80 GQVEFPEFCVMMKRIMKETDS---EMIREAFKIFDRDGNGVITANEFKLFMINMGMCFDE 136
Query: 388 SEVAEVTK--DCMDPEDDDGMIPYAAFLK 468
EV E+ DC D +G I Y F+K
Sbjct: 137 VEVEEMMNEVDC----DGNGEIDYEEFVK 161
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 48.0 bits (109), Expect = 7e-06
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 3/149 (2%)
Frame = +1
Query: 31 MSDLSKXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNS---NPTLATIXXXXXXXXX 201
+ LS +E+ F+++D EGKG I A +G +LR + L +
Sbjct: 9 LEKLSADQIEQFRKYFNMFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLIKEFDADGS 68
Query: 202 XXXXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKL 381
+ + D+G E+ E +LYDK NG + ++L L AL + +
Sbjct: 69 GEIEFEEFAAMVANFVVNNENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNV 128
Query: 382 DDSEVAEVTKDCMDPEDDDGMIPYAAFLK 468
+ E+ E+ + D G + + F++
Sbjct: 129 SEEELDEMIAEI--DADGSGTVDFDEFME 155
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 48.0 bits (109), Expect = 7e-06
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 3/149 (2%)
Frame = +1
Query: 31 MSDLSKXDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNS---NPTLATIXXXXXXXXX 201
+ LS +E+ F+++D EGKG I A +G +LR + L +
Sbjct: 9 LEKLSADQIEQFRKYFNMFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLIKEFDADGS 68
Query: 202 XXXXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKL 381
+ + D+G E+ E +LYDK NG + ++L L AL + +
Sbjct: 69 GEIEFEEFAAMVANFVVNNENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNV 128
Query: 382 DDSEVAEVTKDCMDPEDDDGMIPYAAFLK 468
+ E+ E+ + D G + + F++
Sbjct: 129 SEEELDEMIAEI--DADGSGTVDFDEFME 155
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 76 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAK 255
F +D G GKID+ L LRA+ NPT A + F+PIY + +
Sbjct: 14 FHFHDTLGDGKIDSKQLPTALRAMMLNPTEA-LLAEVSKARTSGARITVEEFIPIYKKVE 72
Query: 256 KDKDQG-AYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEV 396
+ ++F L +D+ NG ++ EL L GEK+ + EV
Sbjct: 73 AACGRSTTLKEFQTLLSHFDREGNGQIMLMELKSMLQNGGEKMTNQEV 120
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +1
Query: 292 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 465
+ ++DKN +G++ +L + LGEKL ++E E+ K D DGMI + F+
Sbjct: 84 DVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIK--QGDLDHDGMIDFQEFV 139
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 292 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 465
E + +DKN +G + EL LL LGEK +S++ + + D +G I FL
Sbjct: 11 EVFREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQA--DLDGNGCIDIDEFL 66
>U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light
chain protein 3, isoformb protein.
Length = 90
Score = 35.1 bits (77), Expect = 0.051
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +1
Query: 76 FSIYDFEGKGKIDAFNLGDLLRALNSNPT--LATIXXXXXXXXXXXXXXXXXXFLPIYSQ 249
F++YD E GKID +GD+ RA PT + T +LP+Y Q
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQ 72
Query: 250 AKKDK 264
K+K
Sbjct: 73 LAKEK 77
>AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical
protein F08B6.3 protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 304 LYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 468
+YDKN++G + G ELT LL G E + + D D DG + Y +K
Sbjct: 223 VYDKNKDGKLAGDELTDWLLVDGTTAGSYEAESLLTNSDD--DKDGQLSYEEIVK 275
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +1
Query: 265 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 426
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +1
Query: 265 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 426
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +1
Query: 265 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 426
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +1
Query: 265 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 426
DQ ++F E + D+N++G++ ++L ++G+ DS++ + K+ P
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP 75
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 292 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAF 462
EC ++D++ENG + + L LG+ D+ + E+ + D +G+I Y F
Sbjct: 134 ECFTVFDRSENGGISKKDFRFILRELGDITDNQIIDEIFNEA--DVDGNGVIDYDEF 188
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 95 KAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKSSFPSTAKQRKTKTRE 274
K ++ P+ L +R TP PSRNS +Q+ A K+ + +++ + T+
Sbjct: 319 KQPSQKKPADLTPHPKRPPITPETLPSRNSEIQKPAASKIQEKKTEVIARSQKSEASTKI 378
Query: 275 RMKIS 289
K S
Sbjct: 379 AQKPS 383
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.4
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 62 GRLSPSQSTTLKAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKS--SF 235
GR S+S+ ++++RS P T + S RS+ R+S RRR+R S SK+
Sbjct: 121 GRTGRSRSSK-RSRSRSRPRTRSGS--RSSSRSRSGSRRSS---RRRSRHRSSSKARGRR 174
Query: 236 PSTAKQRKTKTRERMKISWNV*SCMTR 316
STAK+ K R R + V M+R
Sbjct: 175 ASTAKKTPAKRRSRSRSQQKVKRSMSR 201
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.4
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 62 GRLSPSQSTTLKAKARSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKS--SF 235
GR S+S+ ++++RS P T + S RS+ R+S RRR+R S SK+
Sbjct: 121 GRTGRSRSSK-RSRSRSRPRTRSGS--RSSSRSRSGSRRSS---RRRSRRRSSSKARGRR 174
Query: 236 PSTAKQRKTKTRERMKISWNV*SCMTR 316
STAK+ K R R + V M+R
Sbjct: 175 ASTAKKTPAKRRSRSRSQQKVKRSMSR 201
>AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical
protein W09G10.3 protein.
Length = 338
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 61 RASFAFSIYDFEGKGKID 114
RA FAF + D EGKG++D
Sbjct: 189 RAQFAFQLMDEEGKGRVD 206
>AL032644-7|CAA21670.1| 354|Caenorhabditis elegans Hypothetical
protein Y51H1A.7 protein.
Length = 354
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 635 LRAPPEELSPPRALPAPVPQSRASV 561
LRAP EE PP A APVP ++
Sbjct: 211 LRAPLEEEKPPVATMAPVPDEHKAI 235
>Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical
protein T05H10.5c protein.
Length = 979
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 22 PHKMSDLSKXDVERASFAFSIYDFEGK 102
P +SD S DVE F S++D EGK
Sbjct: 11 PMDISDASVADVESKDFLTSLFDCEGK 37
>Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical
protein T05H10.5a protein.
Length = 980
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 22 PHKMSDLSKXDVERASFAFSIYDFEGK 102
P +SD S DVE F S++D EGK
Sbjct: 11 PMDISDASVADVESKDFLTSLFDCEGK 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,199,034
Number of Sequences: 27780
Number of extensions: 259917
Number of successful extensions: 1027
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -