Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_B17
(515 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7YU95 Cluster: NADH-ubiquinone oxidoreductase; n=5; Ar... 159 3e-38
UniRef50_UPI0001560A38 Cluster: PREDICTED: similar to NDUFA6; n=... 138 7e-32
UniRef50_P56556 Cluster: NADH dehydrogenase [ubiquinone] 1 alpha... 136 2e-31
UniRef50_Q5DGN1 Cluster: SJCHGC05861 protein; n=1; Schistosoma j... 113 2e-24
UniRef50_Q5KNR5 Cluster: Putative uncharacterized protein; n=2; ... 89 7e-17
UniRef50_A6S182 Cluster: NADH-ubiquinone oxidoreductase 14.8 kDa... 77 2e-13
UniRef50_P42114 Cluster: NADH-ubiquinone oxidoreductase 14.8 kDa... 75 1e-12
UniRef50_O18236 Cluster: Putative uncharacterized protein nuo-3;... 74 2e-12
UniRef50_Q6CI60 Cluster: Yarrowia lipolytica chromosome A of str... 69 8e-11
UniRef50_Q5ABD5 Cluster: Potential mitochondrial Complex I, B14_... 67 2e-10
UniRef50_Q54F42 Cluster: NADH dehydrogenase; n=1; Dictyostelium ... 60 4e-08
UniRef50_Q9LHI0 Cluster: Arabidopsis thaliana genomic DNA, chrom... 58 9e-08
UniRef50_Q4QDJ8 Cluster: Putative uncharacterized protein; n=6; ... 41 0.019
UniRef50_Q6IPR1 Cluster: LYR motif-containing protein 5; n=19; B... 40 0.034
UniRef50_Q6UKY9 Cluster: NADH:ubiquinone oxidoreductase B14 subu... 39 0.078
UniRef50_Q8BLW1 Cluster: Adult male aorta and vein cDNA, RIKEN f... 35 1.3
UniRef50_A2TZ55 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q3XXA0 Cluster: Oxidoreductase, N-terminal; n=1; Entero... 33 2.9
UniRef50_Q8IK84 Cluster: Putative uncharacterized protein; n=2; ... 33 2.9
UniRef50_Q1VSN1 Cluster: Ion transporter; n=1; Psychroflexus tor... 33 3.9
UniRef50_Q9NU23 Cluster: LYR motif-containing protein 2; n=12; M... 33 3.9
UniRef50_Q628S3 Cluster: Putative uncharacterized protein CBG002... 33 5.1
UniRef50_UPI0000E801C1 Cluster: PREDICTED: similar to LYR motif ... 32 6.8
UniRef50_A0DWF8 Cluster: Chromosome undetermined scaffold_67, wh... 32 6.8
UniRef50_P42250 Cluster: Uncharacterized protein ycbR; n=2; Baci... 32 6.8
UniRef50_P46578 Cluster: Uncharacterized protein gop-1; n=3; Cae... 32 6.8
UniRef50_UPI000049A127 Cluster: hypothetical protein 61.t00032; ... 32 8.9
UniRef50_Q057S7 Cluster: Outer membrane protein; n=1; Buchnera a... 32 8.9
UniRef50_Q8IJL3 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
>UniRef50_Q7YU95 Cluster: NADH-ubiquinone oxidoreductase; n=5;
Arthropoda|Rep: NADH-ubiquinone oxidoreductase - Ixodes
ricinus (Sheep tick)
Length = 127
Score = 159 bits (386), Expect = 3e-38
Identities = 74/121 (61%), Positives = 93/121 (76%)
Frame = +2
Query: 53 LARQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLK 232
+A +K +TVKP+LS EAR RVL+LYKAWYRQ+P IVK YDIP + Q R KL+
Sbjct: 5 MASNLVKSTARTVKPLLSLDQGEARRRVLNLYKAWYRQMPSIVKMYDIPVTAEQGRTKLR 64
Query: 233 ELFIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFS 412
+ F++NKHV DIR ID+LVIKGQMEL E++ I+KQK H+MA+FK T EPKP +F+SKF S
Sbjct: 65 QEFLRNKHVRDIRTIDLLVIKGQMELVETLKIFKQKSHVMAFFKDTVEPKPADFMSKFLS 124
Query: 413 G 415
G
Sbjct: 125 G 125
>UniRef50_UPI0001560A38 Cluster: PREDICTED: similar to NDUFA6; n=2;
Theria|Rep: PREDICTED: similar to NDUFA6 - Equus
caballus
Length = 267
Score = 138 bits (334), Expect = 7e-32
Identities = 62/123 (50%), Positives = 90/123 (73%)
Frame = +2
Query: 53 LARQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLK 232
L+R A GT +VKP+ S EA+ RV LY+AWYR++P V + + S Q R+K++
Sbjct: 145 LSRAAAAAGT-SVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHLFQLDISVKQGRDKVR 203
Query: 233 ELFIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFS 412
E+F+KN HV D RV+D+LVIKG+MEL+E++ +WKQ+ HIM +F TE P+PK+FLSKF+
Sbjct: 204 EMFMKNAHVMDPRVVDLLVIKGKMELEETIKVWKQRTHIMRFFHETEAPRPKDFLSKFYV 263
Query: 413 GNE 421
G++
Sbjct: 264 GHD 266
>UniRef50_P56556 Cluster: NADH dehydrogenase [ubiquinone] 1 alpha
subcomplex subunit 6; n=33; Eumetazoa|Rep: NADH
dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
- Homo sapiens (Human)
Length = 128
Score = 136 bits (330), Expect = 2e-31
Identities = 57/121 (47%), Positives = 87/121 (71%)
Frame = +2
Query: 59 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 238
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 239 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 418
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 419 E 421
+
Sbjct: 127 D 127
>UniRef50_Q5DGN1 Cluster: SJCHGC05861 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05861 protein - Schistosoma
japonicum (Blood fluke)
Length = 122
Score = 113 bits (272), Expect = 2e-24
Identities = 53/117 (45%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
Frame = +2
Query: 83 KTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQ---CREKLKELFIKNK 253
K +P+LS +HAEAR RV++LY+AWYRQ+P+I K+Y + +L+E F +NK
Sbjct: 6 KAARPILSRNHAEARRRVINLYRAWYRQLPFIPKEYANSSTNVTVPILHARLREEFRRNK 65
Query: 254 HVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEP-KPKNFLSKFFSGNE 421
+ D+R+ID+LV + Q EL E +IWK H+M YF+ P +PK+FL KF SG +
Sbjct: 66 DIKDLRIIDLLVHRWQNELIEVAHIWKSDTHVMDYFREVNLPERPKDFLDKFLSGKQ 122
>UniRef50_Q5KNR5 Cluster: Putative uncharacterized protein; n=2;
Basidiomycota|Rep: Putative uncharacterized protein -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 131
Score = 88.6 bits (210), Expect = 7e-17
Identities = 41/107 (38%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
Frame = +2
Query: 107 SSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKH-VTDIRVIDM 283
SS EAR LS Y+ WYR P IV+ Y + S + R K+++ F +N+ +TD+ V+++
Sbjct: 16 SSWDEARRASLSAYRTWYRSAPDIVQLYGLHVSPSLVRMKIRQDFERNRDTITDLSVMNV 75
Query: 284 LVIKGQMELKESVNIWKQKGHIMAYFKPTEE-PKPKNFLSKFFSGNE 421
+++K E +E++N+WKQ H+M +FK + P+PK FL KF++ +
Sbjct: 76 MLLKNHQEYQETMNVWKQVPHVMHWFKKYDNPPQPKTFLEKFYASRD 122
>UniRef50_A6S182 Cluster: NADH-ubiquinone oxidoreductase 14.8 kDa
subunit; n=6; Pezizomycotina|Rep: NADH-ubiquinone
oxidoreductase 14.8 kDa subunit - Botryotinia fuckeliana
B05.10
Length = 123
Score = 77.4 bits (182), Expect = 2e-13
Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = +2
Query: 104 SSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDM 283
S + +A++RVL Y+ W R P I Y + +Q R K++ F ++++V I +D
Sbjct: 15 SVNWTDAKSRVLKSYREWIRAAPEIQTMYSLGMPVSQLRTKMRSEFERHRYVNHIGTVDK 74
Query: 284 LVIKGQMELKESVNIWKQKGHIMAYFKPTEEPK---PKNFLSKFFSG 415
L+ + E +E++N WKQ HI+ YF+ E+P P+NF++ F G
Sbjct: 75 LLYESHAEFQETLNYWKQLPHILKYFRAEEDPTARLPQNFMTGFLEG 121
>UniRef50_P42114 Cluster: NADH-ubiquinone oxidoreductase 14.8 kDa
subunit; n=10; Pezizomycotina|Rep: NADH-ubiquinone
oxidoreductase 14.8 kDa subunit - Neurospora crassa
Length = 124
Score = 74.9 bits (176), Expect = 1e-12
Identities = 32/104 (30%), Positives = 59/104 (56%)
Frame = +2
Query: 104 SSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDM 283
S++ ++A+ RV +LY+ W R P + Y +P + R ++++ F +N+ V + V+D+
Sbjct: 15 SANWSDAKRRVFALYRRWLRSTPEMQSMYSLPLPISVIRTRIRQEFERNRFVNKLPVVDV 74
Query: 284 LVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSG 415
L+ KG + +E++N W+Q H+M+YF K S F G
Sbjct: 75 LLTKGHADYQETMNFWRQTTHMMSYFNEESFRGAKRLPSSFIDG 118
>UniRef50_O18236 Cluster: Putative uncharacterized protein nuo-3;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein nuo-3 - Caenorhabditis elegans
Length = 131
Score = 74.1 bits (174), Expect = 2e-12
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Frame = +2
Query: 83 KTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQC-REKLKELFIKNKHV 259
+TV P+ S++ AEAR VL+ YK + R P D+ + R +K+ F KN H+
Sbjct: 17 RTVAPIKSNNSAEARMSVLAAYKEFQRLTPKFWWDFGLHDMPLGVFRAVIKKQFTKNGHL 76
Query: 260 TDIRVIDMLVIKGQMELKESVNIWKQKGHIMAY-FKPTEEPKPKNFLSKFFSGNE 421
TD+RV+D LV + +K + H+ Y F E KPK+FLSKF +G E
Sbjct: 77 TDVRVVDRLVGETHQHMKSIRYAFYNPDHVRNYLFAENVEAKPKDFLSKFLNGKE 131
>UniRef50_Q6CI60 Cluster: Yarrowia lipolytica chromosome A of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome A of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 287
Score = 68.5 bits (160), Expect = 8e-11
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Frame = +2
Query: 83 KTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVT 262
+TVK S S E + R L+LY+ + R P Y++ S R K+++ F +++ V
Sbjct: 114 ETVK--FSGSKQELQKRTLALYRQFLRGAPTFADLYEVQFSIPTIRTKIRQEFERHRFVD 171
Query: 263 DIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEE----PKPKNFLSKF 406
D+ + ++L KG ME +E +N WKQ+ + YF ++ +P NF+ KF
Sbjct: 172 DLSIQNVLYAKGHMEYQECINFWKQQAQFLKYFPEEDDIQGRHQPSNFVDKF 223
>UniRef50_Q5ABD5 Cluster: Potential mitochondrial Complex I,
B14_14kd subunit; n=5; Saccharomycetales|Rep: Potential
mitochondrial Complex I, B14_14kd subunit - Candida
albicans (Yeast)
Length = 121
Score = 67.3 bits (157), Expect = 2e-10
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Frame = +2
Query: 104 SSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDM 283
S S+ E + RVL LY+ + R Y++ + + K+++ F + + D+ V ++
Sbjct: 14 SVSNTELKRRVLHLYRKYIRNANEFADLYELDMPVSNIKTKIRQEFERQRFGNDLSVNNV 73
Query: 284 LVIKGQMELKESVNIWKQKGHIMAYF--KPTEEPKPKN-FLSKFFSGN 418
L++KGQME +E +N WKQ+ H+M YF + + KN F+ F GN
Sbjct: 74 LLMKGQMEFQELINFWKQQCHVMRYFDEQNSYNVVDKNDFVKNFLRGN 121
>UniRef50_Q54F42 Cluster: NADH dehydrogenase; n=1; Dictyostelium
discoideum AX4|Rep: NADH dehydrogenase - Dictyostelium
discoideum AX4
Length = 124
Score = 59.7 bits (138), Expect = 4e-08
Identities = 26/94 (27%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +2
Query: 83 KTVKPVLSS-SHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHV 259
K ++P L S + +AR R LY+ R IP++++ Y++ + ++ R + + F++ + V
Sbjct: 9 KQMRPALVSLTQQQARRRCFKLYRNCIRSIPHLIQHYNLSYNMSEMRNRFRSNFVEFEEV 68
Query: 260 TDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYF 361
T+ +D L G+ EL +++++ K + H++ YF
Sbjct: 69 TEKNQLDRLAFIGETELFDAMSLLKTRSHVVNYF 102
>UniRef50_Q9LHI0 Cluster: Arabidopsis thaliana genomic DNA,
chromosome 3, P1 clone: MQC3; n=4; Magnoliophyta|Rep:
Arabidopsis thaliana genomic DNA, chromosome 3, P1
clone: MQC3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 133
Score = 58.4 bits (135), Expect = 9e-08
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = +2
Query: 95 PVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPK--SEAQCREKLKELFIKNKHVTDI 268
P S++ EAR RV ++A R IP I+ Y++ + +Q R + N H+TD
Sbjct: 13 PPNSANLTEARRRVFDFFRAACRSIPTIMDIYNLQDVVAPSQLRYAISAQIRNNAHITDP 72
Query: 269 RVIDMLVIKGQMELKESVNIWKQKGHIMAYF 361
+VID+L+ KG EL + V+ KQ+ HI+ +
Sbjct: 73 KVIDLLIFKGMEELTDIVDHAKQRHHIIGQY 103
>UniRef50_Q4QDJ8 Cluster: Putative uncharacterized protein; n=6;
Trypanosomatidae|Rep: Putative uncharacterized protein -
Leishmania major
Length = 653
Score = 40.7 bits (91), Expect = 0.019
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = +2
Query: 119 EARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKG 298
E + +SLY+ + +P I Y + ++K++ F++N+H D I L+ G
Sbjct: 127 ELKAAAMSLYRTILKSLPMIKHYYWLLVPLPAMKDKIRLRFLQNQHTKDPDAIRHLLHNG 186
Query: 299 QMELKESVNIWKQKGHIMAYFK 364
ME +ES+ + + I YF+
Sbjct: 187 WMEFQESIMFRRPRATIEKYFE 208
>UniRef50_Q6IPR1 Cluster: LYR motif-containing protein 5; n=19;
Bilateria|Rep: LYR motif-containing protein 5 - Homo
sapiens (Human)
Length = 88
Score = 39.9 bits (89), Expect = 0.034
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +2
Query: 125 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 304
R VL LYK + Y+ +DY PK +++LK +F+KNK V + I L+ +G+
Sbjct: 6 RGEVLKLYK----NLLYLGRDY--PKGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEF 59
Query: 305 ELKE 316
+KE
Sbjct: 60 VMKE 63
>UniRef50_Q6UKY9 Cluster: NADH:ubiquinone oxidoreductase B14
subunit; n=1; Chlamydomonas reinhardtii|Rep:
NADH:ubiquinone oxidoreductase B14 subunit -
Chlamydomonas reinhardtii
Length = 138
Score = 38.7 bits (86), Expect = 0.078
Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +2
Query: 161 RQIPYIVKDYDIPK--SEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQMELKESVNIWK 334
R +P+I + + + + S + R +KE F + K V D RV+D+L+ KG+ E++ + + K
Sbjct: 33 RCLPFIQRLHKMEEMVSLKELRAIVKEKFKEYKDVKDGRVVDLLIFKGREEIETYLLMHK 92
Query: 335 QKGHIM 352
Q+ H++
Sbjct: 93 QRHHVV 98
>UniRef50_Q8BLW1 Cluster: Adult male aorta and vein cDNA, RIKEN
full-length enriched library, clone:A530084A08
product:RIKEN cDNA 2610301F02; n=2; Mus musculus|Rep:
Adult male aorta and vein cDNA, RIKEN full-length
enriched library, clone:A530084A08 product:RIKEN cDNA
2610301F02 - Mus musculus (Mouse)
Length = 728
Score = 34.7 bits (76), Expect = 1.3
Identities = 25/112 (22%), Positives = 55/112 (49%)
Frame = +2
Query: 17 WIESLIDSL*KCLARQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDI 196
W+E + +L + ++ ++ + T S EA ++ SL + + +IP+ +D +
Sbjct: 477 WLEEELSTLGRSISCRSRILQTYVA---FRKSSEEAEEQLQSLKEFYLTEIPWKDEDDAV 533
Query: 197 PKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIM 352
K ++ E+ +LF+K +T ++ L + + E +N+ K + HIM
Sbjct: 534 VKCQSNSAERKWQLFLKKSFLTQDLSLEFLNLINMAKENEILNV-KNEMHIM 584
>UniRef50_A2TZ55 Cluster: Putative uncharacterized protein; n=1;
Polaribacter dokdonensis MED152|Rep: Putative
uncharacterized protein - Polaribacter dokdonensis
MED152
Length = 406
Score = 33.9 bits (74), Expect = 2.2
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +2
Query: 68 IKVGTKTVKPVLSSSHAEARNRV--LSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELF 241
+K+ K KPV S + A+N + + LY +++ I +I+K ++ Q + K +
Sbjct: 240 LKINLKYYKPVYSGKDSRAKNHITDIILYSSYFELIEFILK-----LNKNQILKTFKSIK 294
Query: 242 IKNKHVTDIRVIDMLVIKGQMELKESVNIWKQK 340
+ ++T + +K ++ LK+ N WK K
Sbjct: 295 TQTSNITLNSLKKSFNLKSEL-LKKEQNFWKIK 326
>UniRef50_Q3XXA0 Cluster: Oxidoreductase, N-terminal; n=1;
Enterococcus faecium DO|Rep: Oxidoreductase, N-terminal
- Enterococcus faecium DO
Length = 325
Score = 33.5 bits (73), Expect = 2.9
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = -1
Query: 239 RVLSISLDIVLLTWECHNPSLYRGSDDTMLCKDLELYSELQHE 111
R L+I + +L+ WE + SL+ +++T D++LY E+ H+
Sbjct: 234 RNLTIIGEKILIEWEGNPDSLFSWNEETSSMTDIQLYDEVMHD 276
>UniRef50_Q8IK84 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 5890
Score = 33.5 bits (73), Expect = 2.9
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 137 LSLYKA-WYRQIPYIVKDYDIPK-SEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQMEL 310
+S+Y Y PY+V + + K + Q + +LK + K H+T + + +++ KG+ EL
Sbjct: 2236 MSIYNMNLYNMSPYVVYNNNKKKITNIQVKNRLKIILTKMYHMTSVDINEVIYYKGKGEL 2295
Query: 311 KESVNI 328
+N+
Sbjct: 2296 LTDLNL 2301
>UniRef50_Q1VSN1 Cluster: Ion transporter; n=1; Psychroflexus
torquis ATCC 700755|Rep: Ion transporter - Psychroflexus
torquis ATCC 700755
Length = 210
Score = 33.1 bits (72), Expect = 3.9
Identities = 26/106 (24%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Frame = -2
Query: 463 FNNFKLCTK*IYKSFISRKEFRKEIFWFRF-FCWFEVGHNVPLL--FPYVH--RLFQLHL 299
+ +F LC +Y FIS+ RK+ + + F + W ++ ++P++ F Y+ R+F++
Sbjct: 38 YYDFGLCAVFLY-DFISQLRKRKKRWRYFFTYGWLDLLSSIPVVSEFRYIRVLRIFRIFR 96
Query: 298 TLNNQH-INDSNISHMFVLNEEFFQFLSTLCF*LGNVIILHYIGDL 164
+ + H + I+H F F+ST+ L + ++L++ D+
Sbjct: 97 IMKSFHLLYKFVITHKKASLYGFIVFVSTVILVLSSTLVLYFEKDV 142
>UniRef50_Q9NU23 Cluster: LYR motif-containing protein 2; n=12;
Mammalia|Rep: LYR motif-containing protein 2 - Homo
sapiens (Human)
Length = 88
Score = 33.1 bits (72), Expect = 3.9
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 125 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 304
R +VL LY+ + I + D D ++ +E F +NK T+ I M++ +G M
Sbjct: 19 RQQVLLLYRRILQTIRQVPNDSD----RKYLKDWAREEFRRNKSATEEDTIRMMITQGNM 74
Query: 305 ELKE 316
+LKE
Sbjct: 75 QLKE 78
>UniRef50_Q628S3 Cluster: Putative uncharacterized protein CBG00250;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG00250 - Caenorhabditis
briggsae
Length = 969
Score = 32.7 bits (71), Expect = 5.1
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 182 KDYDIPKSEAQCREKLKELFIKN--KHVTDIRVIDMLVIKGQMELKE 316
KD +P+ ++ R LK LF++N + D ++ M++IKG +L+E
Sbjct: 549 KDIVVPRKRSEDRFGLKSLFLQNLRRRCVDELLMLMMIIKGHQQLQE 595
>UniRef50_UPI0000E801C1 Cluster: PREDICTED: similar to LYR motif
containing 2; n=2; Gallus gallus|Rep: PREDICTED: similar
to LYR motif containing 2 - Gallus gallus
Length = 123
Score = 32.3 bits (70), Expect = 6.8
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +2
Query: 125 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 304
R +VL LY R+I ++D ++ +E F +NK T+ I M++ +G M
Sbjct: 54 RQQVLQLY----RRILRALRDVPAEADRRHLQQWAREEFRRNKDATEEDAIRMMITQGHM 109
Query: 305 ELKE 316
+L+E
Sbjct: 110 QLRE 113
>UniRef50_A0DWF8 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_67,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 370
Score = 32.3 bits (70), Expect = 6.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 146 YKAWYRQIPYIVKDYDIPKSEAQC 217
YK Y + YI+K DIP+ EAQC
Sbjct: 196 YKMTYPNLAYIIKATDIPEREAQC 219
>UniRef50_P42250 Cluster: Uncharacterized protein ycbR; n=2;
Bacillus|Rep: Uncharacterized protein ycbR - Bacillus
subtilis
Length = 243
Score = 32.3 bits (70), Expect = 6.8
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 257 VTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFS 412
++D + D L+ + LKE+ K+KG + P E+PK K F S+ FS
Sbjct: 195 ISDDELYDALLAEFPFWLKEA----KEKGIVREQEPPAEKPKKKGFFSRLFS 242
>UniRef50_P46578 Cluster: Uncharacterized protein gop-1; n=3;
Caenorhabditis|Rep: Uncharacterized protein gop-1 -
Caenorhabditis elegans
Length = 892
Score = 32.3 bits (70), Expect = 6.8
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = -2
Query: 340 LLFPYVHRLFQLHLTLNNQHINDSNISHMFVL-NEE----FFQFLSTLCF*LGNVIILHY 176
+LF + L+ L+N H+N S ISH F L N+E + FL TL F L I +
Sbjct: 99 ILFENIRHETSLYFLLSNNHVN-SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFF 157
Query: 175 IGDLT 161
+ T
Sbjct: 158 FNETT 162
>UniRef50_UPI000049A127 Cluster: hypothetical protein 61.t00032;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 61.t00032 - Entamoeba histolytica HM-1:IMSS
Length = 735
Score = 31.9 bits (69), Expect = 8.9
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 218 REKLKELFIKNKHVTDIRVIDMLVIKGQMELKESVN-IWKQKGHIMAYFKPTEEPKPKNF 394
R+K +LF + K RV I G E +E +N ++ Q G+ M Y + EEP+ KN
Sbjct: 52 RDKFTDLFTEYKK----RVDKYCSIGGIQENQELINTLFLQMGYNMNYTESKEEPQSKNL 107
Query: 395 LSKFFSGNE*FVYLLCTKLEIVKPK 469
+ + Y + +KP+
Sbjct: 108 CNLYDDNETREFYTVFPSFSDIKPQ 132
>UniRef50_Q057S7 Cluster: Outer membrane protein; n=1; Buchnera
aphidicola str. Cc (Cinara cedri)|Rep: Outer membrane
protein - Buchnera aphidicola subsp. Cinara cedri
Length = 571
Score = 31.9 bits (69), Expect = 8.9
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = -2
Query: 460 NNFKLCTK*IYKSFISRKEFRKEIFWFRFFCWFEVGHNVPLLFPYVHRLFQLH-LTLNNQ 284
NNF K + F + K+ EIF+ +F F + +N+ ++ ++ LH L ++
Sbjct: 78 NNFFSLNKFNFLKFFNNKKIVNEIFFLNYFKNFYIKNNINNTI-FLKKIISLHKLFFFHK 136
Query: 283 HINDSNISHMFVLNEEF 233
+ N +S+ F L +F
Sbjct: 137 NHNKKYLSNSFFLKNKF 153
>UniRef50_Q8IJL3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 716
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 363 NQQKNLNQKISFRNSFLEMNDLYIYFVQSLKLLNLSNEYINVNLSR 500
N + N+N ISF +S ND Y + +LK+ N++ E N+NL +
Sbjct: 393 NDENNVN--ISFNSSKHISNDEYCHLNDTLKINNINKEQNNLNLKK 436
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,662,506
Number of Sequences: 1657284
Number of extensions: 9184192
Number of successful extensions: 27154
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 26064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27145
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -