Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_B12
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   6.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 260 GGVVDRPASTVRLQQRVLTLHVVSQSALHLVLEVAR 153
           G  VD   S    Q  ++T H+ SQ  LH V  V +
Sbjct: 361 GETVDLFNSLFGYQTLLITFHIGSQLVLHTVKTVLK 396


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 220 WSLTVLAGRSTTPPEP 267
           W +T L    TT PEP
Sbjct: 67  WQVTPLPSDGTTSPEP 82


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -1

Query: 125 VGVIAGAGDGHKGKNNDELHEHFSSYCRDYVNVTCG 18
           V V    GD      N +L E FSSY R    ++ G
Sbjct: 401 VPVYIRPGDTPLEDINPDLAEAFSSYARKNARLSFG 436


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -1

Query: 125 VGVIAGAGDGHKGKNNDELHEHFSSYCRDYVNVTCG 18
           V V    GD      N +L E FSSY R    ++ G
Sbjct: 226 VPVYIRPGDTPLEDINPDLAEAFSSYARKNARLSFG 261


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 170 VLEVARVRIRDAVCEVGVIAGAGDG 96
           ++E AR+R    V EV   A AG+G
Sbjct: 312 LVEYARIRGIRVVLEVDTPAHAGNG 336


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,364
Number of Sequences: 336
Number of extensions: 1430
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)