Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_B06
(890 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 3e-40
SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35) 126 3e-29
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-18
SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09) 48 8e-06
SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05) 30 2.9
SB_58207| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17) 29 6.7
SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) 28 8.8
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1) 28 8.8
SB_33413| Best HMM Match : DUF81 (HMM E-Value=0.31) 28 8.8
SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21) 28 8.8
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_27146| Best HMM Match : LIM (HMM E-Value=9.7) 28 8.8
SB_21674| Best HMM Match : LIM (HMM E-Value=0.44) 28 8.8
>SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 162 bits (394), Expect = 3e-40
Identities = 90/246 (36%), Positives = 132/246 (53%), Gaps = 2/246 (0%)
Frame = +1
Query: 145 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 324
+V+IA AVRTP+ V A+ RA I ++ EV +G V +A G
Sbjct: 9 DVIIACAVRTPVGSHNGDLSSLKAHELGSIVVKEALCRASISPCDVSEVILGQVLTAGQG 68
Query: 325 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 504
Q PARQA I AG+P VN +C SG+K++ L Q + G +I++AGG ESMS P
Sbjct: 69 QGPARQAAIHAGIPACVPAYGVNMLCGSGLKAVALGYQAVAMGDSNIVVAGGQESMSQAP 128
Query: 505 FYL-KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSY 681
R +G M L+D ++ DGL D +N +HMG AEN AK+ +++R++QD +A+ S
Sbjct: 129 HCCHMRPALKFGDMTLIDTMLKDGLMDSFNNYHMGITAENVAKQWEVSREEQDNFALTSQ 188
Query: 682 KRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEXYKRVNFEKFTKLSTVFQKE-NGTV 858
+R+ A +A F DE+V V + + G + ++ E KL F + GTV
Sbjct: 189 QRTETAQKAGYFSDEIVTVSIKTRAGLTEVNSDQFPRHGCTIEGLRKLKPCFLFDGKGTV 248
Query: 859 TAGNAS 876
+AGN S
Sbjct: 249 SAGNTS 254
>SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35)
Length = 415
Score = 126 bits (303), Expect = 3e-29
Identities = 57/92 (61%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Frame = +1
Query: 604 GNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAE 780
G CAEN A K ITR++QD+YA++SY+R+AAA++A F E+VPV +PQK+G P ++F E
Sbjct: 59 GVCAENAASKYNITREEQDDYAIHSYRRTAAAWDAGKFKQEVVPVNIPQKKGKPDIVFEE 118
Query: 781 DEXYKRVNFEKFTKLSTVFQKENGTVTAGNAS 876
DE YK+V+FEKF L TVF+KENGTVTA NAS
Sbjct: 119 DEEYKKVSFEKFPSLKTVFKKENGTVTAANAS 150
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 11/60 (18%)
Frame = +1
Query: 319 LGQAPARQAVIFAG-----------LPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDI 465
+GQAPARQA + AG LP ST CTT+NKVCASGMKSIM AAQ L G+Q +
Sbjct: 1 MGQAPARQAALGAGTRXVTSIRDQALPISTPCTTINKVCASGMKSIMAAAQSLMCGSQGV 60
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 91.1 bits (216), Expect = 1e-18
Identities = 55/114 (48%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +1
Query: 538 GMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAF 717
G Q+ D + + GLTD+ MG AEN A+K ITR++ D++A+ S +R AAA+E+ AF
Sbjct: 799 GAQMEDTL-WQGLTDMLPGLPMGITAENLAEKYNITREECDQFALLSQQRWAAAHESGAF 857
Query: 718 VDELVPVPVPQKRGAPVIFAEDEXYK-RVNFEKFTKLSTVFQKENGTVTAGNAS 876
E+VPVPV K+G P FA DE + E+ KL VF K+NGTV+AGNAS
Sbjct: 858 TAEIVPVPVKGKKG-PEQFAVDEHPRPETTIEQLAKLPAVF-KKNGTVSAGNAS 909
>SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09)
Length = 162
Score = 48.4 bits (110), Expect = 8e-06
Identities = 28/92 (30%), Positives = 47/92 (51%)
Frame = +1
Query: 601 MGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAE 780
MG+ A+ A ++RQ+QDEYA+ S+ + A +A D ++ VP G + +
Sbjct: 13 MGHSADRLASAFHVSRQEQDEYALRSHTLAHQATQAGKLTD-VLSYQVP---GTTTVLSA 68
Query: 781 DEXYKRVNFEKFTKLSTVFQKENGTVTAGNAS 876
D + ++ KL F + GT+TA N+S
Sbjct: 69 DNGIRVSTPQQMAKLKPAFIRPFGTITAANSS 100
>SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05)
Length = 1433
Score = 29.9 bits (64), Expect = 2.9
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Frame = +1
Query: 553 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 711
DG+VFD ++ + M C+ N K + +Q E+ +Y R +A A
Sbjct: 1214 DGVVFDAAIELAHPSDMWVCSTN--KMGALVQQRLIEHHRKNYPRLSATIRFDPDPSVAH 1271
Query: 712 AFVDELVPVPVPQKRGAPV 768
+ + PVPVP KRG V
Sbjct: 1272 RYRKQERPVPVPGKRGEKV 1290
>SB_58207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 870 IAXSNSAIFLLEYRRQFCKLFKINSFILFIFSKYYRSPSFLWNGYW 733
I S S+I + + CK++K +ILFI+S + +WN +W
Sbjct: 23 INTSTSSITPVSADKLLCKVYKRRWYILFIYSFQVTLQNAVWN-FW 67
>SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17)
Length = 1571
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -1
Query: 281 ISSLGIPALSIAALTATAPNSDADKLDKLPRKEPIGVLTADAITTSLRETLVENAAIAVN 102
I+S +P + L AT S L+K +E + A A+ T + TLVE + VN
Sbjct: 972 ITSTSVPEQNATVLPATTFQS----LNKTTTEESVVEPNATAVPTRVNATLVETTGMPVN 1027
Query: 101 I 99
+
Sbjct: 1028 V 1028
>SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 297 WQCLFCKFGPSTCKTSCNICRFAKKY-HMYNCK-QSMCLWHEIYNVGSTR 440
W+C K PS ++ + F KKY H + +S LW+ Y + + R
Sbjct: 80 WECEHVKPVPSDVRSKMRLSGFYKKYLHAFGIPVRSNTLWYRTYAMSTDR 129
>SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12)
Length = 1879
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 65 TSSYWTLTSYCRYLQQWQHSR 127
TS YW LT+ CR+ H R
Sbjct: 1215 TSEYWPLTALCRWTSDMSHVR 1235
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 28.3 bits (60), Expect = 8.8
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Frame = +1
Query: 553 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 711
DG+ FD + M C+ N K + RQ E+ +Y R A A
Sbjct: 4297 DGVAFDAAIEQARPSDMWVCSTN--KMGALVRQRLVEHHRKNYPRLPATIRFDPDPSVAY 4354
Query: 712 AFVDELVPVPVPQKRGAPVIFAEDEXYKRVNFEKFTKLSTVFQKENGTV 858
+ + PVPVP KRG V + YK N K+ TV + T+
Sbjct: 4355 RYRKQGRPVPVPGKRGEKV-----DAYK--NTSKYAGWGTVHRVHGDTI 4396
>SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1)
Length = 908
Score = 28.3 bits (60), Expect = 8.8
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Frame = +1
Query: 553 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 711
DG+ FD + + +M C+ N L +Q E+ +Y R A A
Sbjct: 564 DGVAFDAAIEQAHSSYMWVCSTNKIGAL--VQQRLIEHHRKNYPRLPATIRFDPDPSVAH 621
Query: 712 AFVDELVPVPVPQKRGAPVI 771
+ + PVPVP KRG V+
Sbjct: 622 CYRKQGRPVPVPGKRGEKVV 641
>SB_33413| Best HMM Match : DUF81 (HMM E-Value=0.31)
Length = 455
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 828 RQFCKLFKINSFILFIFSKYYRSPSFLWN 742
R CK++K ++LF+FS + + +WN
Sbjct: 23 RVTCKVYKRRWYVLFVFSAAAMTSNVMWN 51
>SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21)
Length = 956
Score = 28.3 bits (60), Expect = 8.8
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 553 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 711
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 735 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 792
Query: 712 AFVDELVPVPVPQKRGAPV 768
+ + PVPVP KRG V
Sbjct: 793 RYRKQGRPVPVPGKRGEKV 811
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 297 WQCLFCKFGPSTCKTSCNICRFAKKYHMYNCKQSMCL 407
WQ + + GP KTSC +C KY++ N CL
Sbjct: 864 WQSNYTQCGPCASKTSCPVCNI--KYNL-NDLMIQCL 897
>SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 28.3 bits (60), Expect = 8.8
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 553 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 711
DG+ FD + + M C+ N K + +Q E+ +Y R A A
Sbjct: 707 DGVAFDAAIEQAHPSDMWVCSTN--KMGALVQQQLVEHHRKNYPRLPAIIRFDPDPSVAH 764
Query: 712 AFVDELVPVPVPQKRGAPV 768
+ + PVPVP KRGA V
Sbjct: 765 RYRKQGRPVPVPGKRGAKV 783
>SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 28.3 bits (60), Expect = 8.8
Identities = 27/102 (26%), Positives = 41/102 (40%)
Frame = +1
Query: 250 IERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIML 429
I + GI EEI +V A + + + G PKS +CT+VN+V G+ +
Sbjct: 72 IVKVGITTEEIDY----HVHKAIIEHGAYPSPLNYRGFPKS-VCTSVNEVAVHGIPNSRC 126
Query: 430 AAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVD 555
G + GG+ F + G G +LVD
Sbjct: 127 LQNGDLLSVDISLFYGGVHGDLCETFLV--GNVDESGRRLVD 166
>SB_27146| Best HMM Match : LIM (HMM E-Value=9.7)
Length = 296
Score = 28.3 bits (60), Expect = 8.8
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 553 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 711
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 102 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 159
Query: 712 AFVDELVPVPVPQKRGAPV 768
+ + PVPVP KRG V
Sbjct: 160 RYRKQGRPVPVPGKRGEKV 178
>SB_21674| Best HMM Match : LIM (HMM E-Value=0.44)
Length = 885
Score = 28.3 bits (60), Expect = 8.8
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 553 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 711
DG+ FD + ++ M C+ N K + +Q E+ + Y R A A
Sbjct: 664 DGVAFDAAIEQAHRSDMWVCSTN--KMGALVQQRLVEHHMKKYPRLPATIRFDPDPSVAH 721
Query: 712 AFVDELVPVPVPQKRGAPV 768
+ + PVPVP KRG V
Sbjct: 722 RYRKQGRPVPVPGKRGEKV 740
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,386,164
Number of Sequences: 59808
Number of extensions: 529260
Number of successful extensions: 1595
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1584
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2550281014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -