Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_B04
(503 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VMY1 Cluster: Probable 39S ribosomal protein L24, mit... 131 1e-29
UniRef50_UPI0000E4852A Cluster: PREDICTED: similar to ENSANGP000... 99 7e-20
UniRef50_UPI0000EC9E00 Cluster: 39S ribosomal protein L24, mitoc... 89 5e-17
UniRef50_P91353 Cluster: Probable 39S ribosomal protein L24, mit... 87 2e-16
UniRef50_Q96A35 Cluster: 39S ribosomal protein L24, mitochondria... 79 4e-14
UniRef50_A7RLR8 Cluster: Predicted protein; n=1; Nematostella ve... 59 5e-08
UniRef50_Q5DGV6 Cluster: SJCHGC05064 protein; n=1; Schistosoma j... 48 9e-05
UniRef50_A2EC84 Cluster: Putative uncharacterized protein; n=2; ... 34 1.6
UniRef50_Q6LFL6 Cluster: 50S ribosomal subunit L24, putative; n=... 33 3.7
UniRef50_Q8IKD3 Cluster: Cyclic nucleotide phosphodiesterase, pu... 33 4.8
UniRef50_Q24C34 Cluster: Ribosomal protein L24 containing protei... 33 4.8
UniRef50_Q5CQ91 Cluster: Protein with 8 transmembrane domains; n... 32 6.4
UniRef50_Q4E3P6 Cluster: Inositol-1,4,5-trisphosphate (IP3) 5-ph... 32 6.4
UniRef50_Q742I1 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
UniRef50_Q1IQZ9 Cluster: Secretion protein HlyD precursor; n=1; ... 32 8.5
UniRef50_A6RG78 Cluster: DNA topoisomerase 2; n=1; Ajellomyces c... 32 8.5
>UniRef50_Q9VMY1 Cluster: Probable 39S ribosomal protein L24,
mitochondrial precursor; n=7; Endopterygota|Rep:
Probable 39S ribosomal protein L24, mitochondrial
precursor - Drosophila melanogaster (Fruit fly)
Length = 247
Score = 131 bits (316), Expect = 1e-29
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = +1
Query: 70 SPXKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAV 249
S + TD EWR+TEEG+KVRVSL S RIIPIP+T +T DYK+ YI+ EKDT V
Sbjct: 155 SDLQGTDFEWRFTEEGEKVRVSLRSGRIIPIPETNNQTHDYKTPNAYIER-EKDTPGAVV 213
Query: 250 TKITFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
+ITF PKL TFEMDIMEEMGIKE+R P KSYWY
Sbjct: 214 GEITFQPKLSTFEMDIMEEMGIKEERTPVKSYWY 247
Score = 34.3 bits (75), Expect = 1.6
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 15 IQSEAPLLVTTDVKLVDPESLXG 83
I+SEAPL VT D++LVDP L G
Sbjct: 137 IKSEAPLHVTKDIRLVDPSDLQG 159
>UniRef50_UPI0000E4852A Cluster: PREDICTED: similar to
ENSANGP00000019594; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000019594
- Strongylocentrotus purpuratus
Length = 213
Score = 98.7 bits (235), Expect = 7e-20
Identities = 47/94 (50%), Positives = 65/94 (69%)
Frame = +1
Query: 70 SPXKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAV 249
S K TD+++RYTE G++VRVS + RIIPIP ++ DYK+KE Y++ KD+ A+ V
Sbjct: 121 SDNKPTDIDFRYTEAGEQVRVSKRTGRIIPIPIVDSDSRDYKTKESYVEQ-PKDSVAEDV 179
Query: 250 TKITFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
K TF P L+T E ++ME + IKE R AK+YWY
Sbjct: 180 CKKTFEPSLKTVEEELMEALDIKETRKRAKTYWY 213
>UniRef50_UPI0000EC9E00 Cluster: 39S ribosomal protein L24,
mitochondrial precursor (L24mt) (MRP-L24).; n=2; Gallus
gallus|Rep: 39S ribosomal protein L24, mitochondrial
precursor (L24mt) (MRP-L24). - Gallus gallus
Length = 95
Score = 89.0 bits (211), Expect = 5e-17
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 79 KATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKI 258
K T+V+WRYTEEG++VRVSL + RIIP+P D E +ID KDT+ D
Sbjct: 8 KPTEVDWRYTEEGERVRVSLRTGRIIPLPLWQRR--DGIVPEQWIDG-PKDTSVDDALDK 64
Query: 259 TFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
T+ P L+TFE +IM+ MGI E R KSYWY
Sbjct: 65 TYTPSLKTFEEEIMDAMGIVETRRAKKSYWY 95
>UniRef50_P91353 Cluster: Probable 39S ribosomal protein L24,
mitochondrial precursor; n=2; Caenorhabditis|Rep:
Probable 39S ribosomal protein L24, mitochondrial
precursor - Caenorhabditis elegans
Length = 278
Score = 87.4 bits (207), Expect = 2e-16
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 88 DVEWRYTEEGDK-VRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITF 264
+ W+ GD+ +RVS S IPIP A+ T +Y E YI+ KDT ADAV + T+
Sbjct: 190 EARWQLNGPGDEYIRVSTRSGYEIPIPSQAKVTYEYLQPENYIEVEGKDTPADAVLERTY 249
Query: 265 APKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
PK+ +FE +IMEEMGIKE+R P ++WY
Sbjct: 250 MPKVASFEQEIMEEMGIKEERTPKPTFWY 278
>UniRef50_Q96A35 Cluster: 39S ribosomal protein L24, mitochondrial
precursor; n=26; Euteleostomi|Rep: 39S ribosomal protein
L24, mitochondrial precursor - Homo sapiens (Human)
Length = 216
Score = 79.4 bits (187), Expect = 4e-14
Identities = 41/91 (45%), Positives = 56/91 (61%)
Frame = +1
Query: 79 KATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKI 258
K T++EWR+TE G++VRVS S RIIP P+ D E +ID KDT+ + +
Sbjct: 129 KPTEIEWRFTEAGERVRVSTRSGRIIPKPEFPRA--DGIVPETWIDG-PKDTSVEDALER 185
Query: 259 TFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
T+ P L+T + ++ME MGIKE R K YWY
Sbjct: 186 TYVPCLKTLQEEVMEAMGIKETRKYKKVYWY 216
>UniRef50_A7RLR8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 187
Score = 59.3 bits (137), Expect = 5e-08
Identities = 34/82 (41%), Positives = 49/82 (59%)
Frame = +1
Query: 70 SPXKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAV 249
S K TDV +RYTE+G++VRVS + RI IPK E D+K++ D + DT A A
Sbjct: 109 SDKKPTDVAYRYTEKGERVRVSERTGRI--IPKPTWERRDWKTRSAVKDG-DHDTLASAA 165
Query: 250 TKITFAPKLRTFEMDIMEEMGI 315
++ ++ P L F +IM+ M I
Sbjct: 166 SRNSYIPSLLHFHEEIMKAMNI 187
>UniRef50_Q5DGV6 Cluster: SJCHGC05064 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05064 protein - Schistosoma
japonicum (Blood fluke)
Length = 270
Score = 48.4 bits (110), Expect = 9e-05
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +1
Query: 97 WRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITFAPKL 276
WRYT++G +VRVSL + +IP+P A D + + + DT V+ IT
Sbjct: 182 WRYTKDGIRVRVSLQTGHVIPLPAAARYLDDLTDPKTAVVS-SGDTNESFVSNITLNYIH 240
Query: 277 RT----FEMDIMEEMGIKEDRV-PAKSYWY 351
T FE + + + +K D + PA +YWY
Sbjct: 241 STSDVHFEKSLSQHLNLKCDYLKPAFTYWY 270
>UniRef50_A2EC84 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 239
Score = 34.3 bits (75), Expect = 1.6
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 100 RYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITFAPKLR 279
+Y ++V+ L SS E +D K LYI N EKD A+ V K + L
Sbjct: 92 KYDSHINEVKEMLKSSTSTLDDVFHSEPVDRPPKPLYIMNAEKDKEAEKVIKRRYMKSLN 151
Query: 280 TFEMD-IMEE-MGIKEDRVPAKSYWY*NQ 360
+M+ IM+E + E R ++ W N+
Sbjct: 152 ILKMEPIMKERLQESEKRGKERAAWRVNR 180
>UniRef50_Q6LFL6 Cluster: 50S ribosomal subunit L24, putative; n=4;
Plasmodium|Rep: 50S ribosomal subunit L24, putative -
Plasmodium falciparum (isolate 3D7)
Length = 194
Score = 33.1 bits (72), Expect = 3.7
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = +1
Query: 85 TDVEWRYTEEGDKVRVSLASSRIIPIP--KTAEETIDYKSKELYIDNIEKDT---TADAV 249
T V RYT++ +R+S S +IP P KT EE D + +E +D + ++ T D
Sbjct: 115 TKVALRYTDDNQVIRISKKSGTVIPWPSEKTKEEDYD-QIEENPLDTLPQEALKKTYDYK 173
Query: 250 TKITFAPKLR 279
T + F LR
Sbjct: 174 TDVKFMNILR 183
>UniRef50_Q8IKD3 Cluster: Cyclic nucleotide phosphodiesterase,
putative; n=1; Plasmodium falciparum 3D7|Rep: Cyclic
nucleotide phosphodiesterase, putative - Plasmodium
falciparum (isolate 3D7)
Length = 813
Score = 32.7 bits (71), Expect = 4.8
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = -3
Query: 393 SYINNTKQLCFLVLIPVTFGGNPILFYTHFFHNVHFKGPEFWRKSYLSNSICSGVLFNII 214
SY+NNT +C+L+ G+P ++ H + S L N CS + F+I+
Sbjct: 480 SYLNNTYMICYLIASIAHDVGHPGKTNSYLSETNHILSIRYNDMSILENYHCS-ITFSIL 538
Query: 213 NVQLFTLVIN 184
+ F +IN
Sbjct: 539 QLIGFDFLIN 548
>UniRef50_Q24C34 Cluster: Ribosomal protein L24 containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Ribosomal
protein L24 containing protein - Tetrahymena thermophila
SB210
Length = 234
Score = 32.7 bits (71), Expect = 4.8
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +1
Query: 79 KATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKI 258
KAT + + Y E+G K+R+S S II P + ++K +D + DT A+ V ++
Sbjct: 145 KATRIRFGYLEDGKKIRISTKSGSIIEKPFDHGWKRENRNKN-KVDGM-LDTPAEKVLQV 202
Query: 259 TF 264
T+
Sbjct: 203 TY 204
>UniRef50_Q5CQ91 Cluster: Protein with 8 transmembrane domains; n=2;
Cryptosporidium|Rep: Protein with 8 transmembrane
domains - Cryptosporidium parvum Iowa II
Length = 324
Score = 32.3 bits (70), Expect = 6.4
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = -3
Query: 375 KQLCFLVLIPVTFGGNPIL---FYTHFFHNVHFKGPEFWRKSYLSNSICSGVLFNIINVQ 205
K + +L L+ F N IL F+T F+ F GP F K+ + G LFNI+N+
Sbjct: 199 KLVSYLFLVAFFFTRNIILPYAFHTQMFNAFKF-GPTFKSKARVCIFFPIGELFNIMNIY 257
Query: 204 -LFTLVINCF 178
L+ +V N F
Sbjct: 258 WLYKVVKNVF 267
>UniRef50_Q4E3P6 Cluster: Inositol-1,4,5-trisphosphate (IP3)
5-phosphatase, putative; n=3; Trypanosoma|Rep:
Inositol-1,4,5-trisphosphate (IP3) 5-phosphatase,
putative - Trypanosoma cruzi
Length = 580
Score = 32.3 bits (70), Expect = 6.4
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 348 PVTFGGNPILFYTHFFHNVHFKGPEFWRKSYLSNSICSG-VLFNIINVQLF 199
P T+G +P T FH F G RK +L S+ G V+ N +NV L+
Sbjct: 266 PATYGSSP----TFLFHGGKFSGAGSGRKGFLLTSLRFGTVVVNYLNVHLY 312
>UniRef50_Q742I1 Cluster: Putative uncharacterized protein; n=1;
Mycobacterium avium subsp. paratuberculosis|Rep:
Putative uncharacterized protein - Mycobacterium
paratuberculosis
Length = 525
Score = 31.9 bits (69), Expect = 8.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 132 HSYLISFFSVSPFYISSLXRTLGRPISHQWL 40
H+ + S S+S I + RTLGR ++H WL
Sbjct: 250 HALVFSVTSLSSGLIEGIERTLGRGVNHDWL 280
>UniRef50_Q1IQZ9 Cluster: Secretion protein HlyD precursor; n=1;
Acidobacteria bacterium Ellin345|Rep: Secretion protein
HlyD precursor - Acidobacteria bacterium (strain
Ellin345)
Length = 417
Score = 31.9 bits (69), Expect = 8.5
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 91 VEWRYTEEGDKVRVSLASSRIIPIPKTAE-ETIDYK--SKELYIDNIEKDTTADAVTKIT 261
V WRY++ G V+ +SS P+ K AE T+ + E + +I + TAD V T
Sbjct: 218 VTWRYSDTGALVQAGTSSSSAQPVVKLAEVRTLRLRIPVPESVVPSIHQGQTADVVVSAT 277
>UniRef50_A6RG78 Cluster: DNA topoisomerase 2; n=1; Ajellomyces
capsulatus NAm1|Rep: DNA topoisomerase 2 - Ajellomyces
capsulatus NAm1
Length = 1808
Score = 31.9 bits (69), Expect = 8.5
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 166 KTAEETIDYKSKELYIDNIEK-------DTTADAVTKITFAPKLRTFEMDIMEE 306
+TA+ + K K+ + DN+ K D D TK+TF P + F MD +++
Sbjct: 285 ETADSKLKKKYKQTWTDNMSKMGKPKITDCKGDDYTKVTFTPDFKKFGMDGIDD 338
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,336,718
Number of Sequences: 1657284
Number of extensions: 6773763
Number of successful extensions: 18555
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18549
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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