Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_B04
         (503 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   2.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   2.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   3.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   3.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   4.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   6.3  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 88  DVEWRYTEEGDK 123
           DV+W Y  EGD+
Sbjct: 139 DVDWEYPLEGDR 150


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 300 HNVHFKGPEFWR 265
           +NV +K  EFWR
Sbjct: 326 YNVEYKNVEFWR 337


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 232 CPFQYYQCTTLYSCNQLFLRL 170
           C  QY+ C T+ S    F+ L
Sbjct: 154 CGIQYHICNTVISATVCFMML 174


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 232 CPFQYYQCTTLYSCNQLFLRL 170
           C  QY+ C T+ S    F+ L
Sbjct: 150 CGIQYHICNTVISATVCFMML 170


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 267 RKSYLSNSICS-GVLFNIINVQLFTLVINC 181
           +K Y+   + + GV F +INV   TL+++C
Sbjct: 243 KKQYIGVVVANVGVAF-MINVGTVTLILSC 271


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 119 SPSSVYLHSTSVAXQGLWVDQ 57
           SP  +Y+H  S +    W++Q
Sbjct: 97  SPHRIYMHPESPSKGSHWMNQ 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,828
Number of Sequences: 336
Number of extensions: 1862
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)