Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_B04
         (503 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0808 - 28196563-28196735,28197369-28197440,28197540-281976...    30   1.2  
06_03_0374 + 20026179-20026661,20027170-20027280,20027372-200274...    28   4.9  
09_04_0246 - 16024454-16024529,16024635-16024720,16024805-160248...    27   6.5  
07_03_0650 + 20274332-20274760,20274920-20274985,20275135-202752...    27   8.6  

>04_04_0808 -
           28196563-28196735,28197369-28197440,28197540-28197666,
           28198362-28198430,28198517-28198583,28198751-28198872,
           28199302-28199412,28199596-28199661,28200156-28200213,
           28200307-28200343,28200420-28200513,28200967-28201032,
           28201139-28201203,28201352-28201496,28201925-28202074,
           28202266-28202335,28202752-28202828,28202919-28202987,
           28203798-28203881,28204018-28204061,28204172-28204273,
           28204420-28204618,28204672-28204727,28204886-28204958,
           28205685-28205771,28205863-28205976,28206985-28207092,
           28207183-28207278,28207722-28207787,28208130-28208222,
           28208429-28208512,28208961-28209078,28209191-28209267,
           28209459-28209641,28210542-28210636,28210903-28211053,
           28212218-28212325,28212513-28212612,28212788-28212840,
           28214022-28214102
          Length = 1269

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +1

Query: 118 DKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVT 252
           ++  V+L    I+P+      T+ + S+    D + +++TADA+T
Sbjct: 463 ERAYVNLVKEEILPMVLAHNLTMSFSSESSIQDELNRESTADAIT 507


>06_03_0374 +
           20026179-20026661,20027170-20027280,20027372-20027416,
           20029610-20029682,20029762-20029874,20030009-20030068,
           20031518-20031565,20031658-20031726,20032928-20033092,
           20033630-20033680,20034774-20034803
          Length = 415

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = +1

Query: 124 VRVSLASSRIIPI-PKTAEETIDYK---SKELYIDNIEKDTTADAV 249
           VRV  + + I+P+ PK    T D K   S+ +Y  NI+K+   DAV
Sbjct: 256 VRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDAV 301


>09_04_0246 -
           16024454-16024529,16024635-16024720,16024805-16024894,
           16025349-16025435,16026112-16026229,16026852-16026982,
           16027619-16027909,16028000-16028124,16028209-16028334,
           16028452-16028487,16028599-16028902
          Length = 489

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 116 EIRYECHWPAVESYPFLKQPKKQLITRVKSCTLIILKRTP 235
           +IR E H   + + P+LK+ ++Q + R K  T  I+ + P
Sbjct: 70  KIREELHQKYLRAEPWLKEQERQRLERNKRFTTEIINQPP 109


>07_03_0650 +
           20274332-20274760,20274920-20274985,20275135-20275205,
           20275525-20275537
          Length = 192

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 244 AVTKITFAPKLRTFEMDIMEEMGIKEDR 327
           A+T++  +PK R    D+ +E+GI +DR
Sbjct: 146 ALTQLELSPKRRCNTRDLTKEVGIGDDR 173


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,737,161
Number of Sequences: 37544
Number of extensions: 174265
Number of successful extensions: 455
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)