Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_B04
(503 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457329-1|CAG33610.1| 216|Homo sapiens MRPL24 protein. 79 7e-15
BC016700-1|AAH16700.1| 216|Homo sapiens mitochondrial ribosomal... 79 7e-15
BC012440-1|AAH12440.1| 216|Homo sapiens mitochondrial ribosomal... 79 7e-15
AL590666-9|CAI16344.1| 216|Homo sapiens mitochondrial ribosomal... 79 7e-15
AK222500-1|BAD96220.1| 216|Homo sapiens mitochondrial ribosomal... 79 7e-15
AB051341-1|BAB54931.2| 88|Homo sapiens mitochondrial ribosomal... 79 7e-15
AK223066-1|BAD96786.1| 216|Homo sapiens mitochondrial ribosomal... 78 2e-14
AK024570-1|BAB14929.1| 216|Homo sapiens protein ( Homo sapiens ... 77 3e-14
AL590666-10|CAI16343.1| 173|Homo sapiens mitochondrial ribosoma... 45 2e-04
BC011571-1|AAH11571.1| 903|Homo sapiens ITCH protein protein. 29 7.0
AL356299-4|CAI17959.1| 903|Homo sapiens itchy homolog E3 ubiqui... 29 7.0
AL356299-3|CAI17960.1| 862|Homo sapiens itchy homolog E3 ubiqui... 29 7.0
AL109923-6|CAI21458.1| 903|Homo sapiens itchy homolog E3 ubiqui... 29 7.0
AL109923-5|CAI21459.1| 862|Homo sapiens itchy homolog E3 ubiqui... 29 7.0
AF095745-1|AAK39399.1| 862|Homo sapiens ubiquitin protein ligas... 29 7.0
AF038564-1|AAC04845.1| 739|Homo sapiens atrophin-1 interacting ... 29 7.0
AB209747-1|BAD92984.1| 605|Homo sapiens itchy homolog E3 ubiqui... 29 7.0
AB056663-1|BAB39389.1| 862|Homo sapiens ubiquitin protein ligas... 29 7.0
>CR457329-1|CAG33610.1| 216|Homo sapiens MRPL24 protein.
Length = 216
Score = 79.4 bits (187), Expect = 7e-15
Identities = 41/91 (45%), Positives = 56/91 (61%)
Frame = +1
Query: 79 KATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKI 258
K T++EWR+TE G++VRVS S RIIP P+ D E +ID KDT+ + +
Sbjct: 129 KPTEIEWRFTEAGERVRVSTRSGRIIPKPEFPRA--DGIVPETWIDG-PKDTSVEDALER 185
Query: 259 TFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
T+ P L+T + ++ME MGIKE R K YWY
Sbjct: 186 TYVPCLKTLQEEVMEAMGIKETRKYKKVYWY 216
>BC016700-1|AAH16700.1| 216|Homo sapiens mitochondrial ribosomal
protein L24 protein.
Length = 216
Score = 79.4 bits (187), Expect = 7e-15
Identities = 41/91 (45%), Positives = 56/91 (61%)
Frame = +1
Query: 79 KATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKI 258
K T++EWR+TE G++VRVS S RIIP P+ D E +ID KDT+ + +
Sbjct: 129 KPTEIEWRFTEAGERVRVSTRSGRIIPKPEFPRA--DGIVPETWIDG-PKDTSVEDALER 185
Query: 259 TFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
T+ P L+T + ++ME MGIKE R K YWY
Sbjct: 186 TYVPCLKTLQEEVMEAMGIKETRKYKKVYWY 216
>BC012440-1|AAH12440.1| 216|Homo sapiens mitochondrial ribosomal
protein L24 protein.
Length = 216
Score = 79.4 bits (187), Expect = 7e-15
Identities = 41/91 (45%), Positives = 56/91 (61%)
Frame = +1
Query: 79 KATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKI 258
K T++EWR+TE G++VRVS S RIIP P+ D E +ID KDT+ + +
Sbjct: 129 KPTEIEWRFTEAGERVRVSTRSGRIIPKPEFPRA--DGIVPETWIDG-PKDTSVEDALER 185
Query: 259 TFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
T+ P L+T + ++ME MGIKE R K YWY
Sbjct: 186 TYVPCLKTLQEEVMEAMGIKETRKYKKVYWY 216
>AL590666-9|CAI16344.1| 216|Homo sapiens mitochondrial ribosomal
protein L24 protein.
Length = 216
Score = 79.4 bits (187), Expect = 7e-15
Identities = 41/91 (45%), Positives = 56/91 (61%)
Frame = +1
Query: 79 KATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKI 258
K T++EWR+TE G++VRVS S RIIP P+ D E +ID KDT+ + +
Sbjct: 129 KPTEIEWRFTEAGERVRVSTRSGRIIPKPEFPRA--DGIVPETWIDG-PKDTSVEDALER 185
Query: 259 TFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
T+ P L+T + ++ME MGIKE R K YWY
Sbjct: 186 TYVPCLKTLQEEVMEAMGIKETRKYKKVYWY 216
>AK222500-1|BAD96220.1| 216|Homo sapiens mitochondrial ribosomal
protein L24 variant protein.
Length = 216
Score = 79.4 bits (187), Expect = 7e-15
Identities = 41/91 (45%), Positives = 56/91 (61%)
Frame = +1
Query: 79 KATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKI 258
K T++EWR+TE G++VRVS S RIIP P+ D E +ID KDT+ + +
Sbjct: 129 KPTEIEWRFTEAGERVRVSTRSGRIIPKPEFPRA--DGIVPETWIDG-PKDTSVEDALER 185
Query: 259 TFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
T+ P L+T + ++ME MGIKE R K YWY
Sbjct: 186 TYVPCLKTLQEEVMEAMGIKETRKYKKVYWY 216
>AB051341-1|BAB54931.2| 88|Homo sapiens mitochondrial ribosomal
protein L24 protein.
Length = 88
Score = 79.4 bits (187), Expect = 7e-15
Identities = 41/91 (45%), Positives = 56/91 (61%)
Frame = +1
Query: 79 KATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKI 258
K T++EWR+TE G++VRVS S RIIP P+ D E +ID KDT+ + +
Sbjct: 1 KPTEIEWRFTEAGERVRVSTRSGRIIPKPEFPRA--DGIVPETWIDG-PKDTSVEDALER 57
Query: 259 TFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
T+ P L+T + ++ME MGIKE R K YWY
Sbjct: 58 TYVPCLKTLQEEVMEAMGIKETRKYKKVYWY 88
>AK223066-1|BAD96786.1| 216|Homo sapiens mitochondrial ribosomal
protein L24 variant protein.
Length = 216
Score = 77.8 bits (183), Expect = 2e-14
Identities = 40/91 (43%), Positives = 56/91 (61%)
Frame = +1
Query: 79 KATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKI 258
K T++EWR+TE G++VRVS S RIIP P+ D E +ID KDT+ + +
Sbjct: 129 KPTEIEWRFTEAGERVRVSTRSGRIIPKPEFPR--ADGIVPETWIDG-PKDTSVEDALER 185
Query: 259 TFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
T+ P L+T + ++ME MGIKE + K YWY
Sbjct: 186 TYVPCLKTLQEEVMEAMGIKETQKYKKVYWY 216
>AK024570-1|BAB14929.1| 216|Homo sapiens protein ( Homo sapiens
cDNA: FLJ20917 fis, clone ADSE00750. ).
Length = 216
Score = 77.4 bits (182), Expect = 3e-14
Identities = 40/91 (43%), Positives = 55/91 (60%)
Frame = +1
Query: 79 KATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKI 258
K T+++WR+TE G +VRVS S RIIP P+ D E +ID KDT+ + +
Sbjct: 129 KPTEIDWRFTEAGQRVRVSTRSGRIIPKPEFPRA--DGIVPETWIDG-PKDTSVEDALER 185
Query: 259 TFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
T+ P L+T + ++ME MGIKE R K YWY
Sbjct: 186 TYVPCLKTLQEEVMEAMGIKETRKYKKVYWY 216
>AL590666-10|CAI16343.1| 173|Homo sapiens mitochondrial ribosomal
protein L24 protein.
Length = 173
Score = 44.8 bits (101), Expect = 2e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +1
Query: 79 KATDVEWRYTEEGDKVRVSLASSRIIPIPK 168
K T++EWR+TE G++VRVS S RIIP P+
Sbjct: 129 KPTEIEWRFTEAGERVRVSTRSGRIIPKPE 158
>BC011571-1|AAH11571.1| 903|Homo sapiens ITCH protein protein.
Length = 903
Score = 29.5 bits (63), Expect = 7.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 157 PIPKTAEETIDYKSKELYIDNIEKDTTAD 243
P+P E+ +D + Y+D++EK TT D
Sbjct: 327 PLPPGWEQRVDQHGRVYYVDHVEKRTTWD 355
>AL356299-4|CAI17959.1| 903|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 903
Score = 29.5 bits (63), Expect = 7.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 157 PIPKTAEETIDYKSKELYIDNIEKDTTAD 243
P+P E+ +D + Y+D++EK TT D
Sbjct: 327 PLPPGWEQRVDQHGRVYYVDHVEKRTTWD 355
>AL356299-3|CAI17960.1| 862|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 862
Score = 29.5 bits (63), Expect = 7.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 157 PIPKTAEETIDYKSKELYIDNIEKDTTAD 243
P+P E+ +D + Y+D++EK TT D
Sbjct: 286 PLPPGWEQRVDQHGRVYYVDHVEKRTTWD 314
>AL109923-6|CAI21458.1| 903|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 903
Score = 29.5 bits (63), Expect = 7.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 157 PIPKTAEETIDYKSKELYIDNIEKDTTAD 243
P+P E+ +D + Y+D++EK TT D
Sbjct: 327 PLPPGWEQRVDQHGRVYYVDHVEKRTTWD 355
>AL109923-5|CAI21459.1| 862|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 862
Score = 29.5 bits (63), Expect = 7.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 157 PIPKTAEETIDYKSKELYIDNIEKDTTAD 243
P+P E+ +D + Y+D++EK TT D
Sbjct: 286 PLPPGWEQRVDQHGRVYYVDHVEKRTTWD 314
>AF095745-1|AAK39399.1| 862|Homo sapiens ubiquitin protein ligase
ITCH protein.
Length = 862
Score = 29.5 bits (63), Expect = 7.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 157 PIPKTAEETIDYKSKELYIDNIEKDTTAD 243
P+P E+ +D + Y+D++EK TT D
Sbjct: 286 PLPPGWEQRVDQHGRVYYVDHVEKRTTWD 314
>AF038564-1|AAC04845.1| 739|Homo sapiens atrophin-1 interacting
protein 4 protein.
Length = 739
Score = 29.5 bits (63), Expect = 7.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 157 PIPKTAEETIDYKSKELYIDNIEKDTTAD 243
P+P E+ +D + Y+D++EK TT D
Sbjct: 163 PLPPGWEQRVDQHGRVYYVDHVEKRTTWD 191
>AB209747-1|BAD92984.1| 605|Homo sapiens itchy homolog E3 ubiquitin
protein ligase variant protein.
Length = 605
Score = 29.5 bits (63), Expect = 7.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 157 PIPKTAEETIDYKSKELYIDNIEKDTTAD 243
P+P E+ +D + Y+D++EK TT D
Sbjct: 29 PLPPGWEQRVDQHGRVYYVDHVEKRTTWD 57
>AB056663-1|BAB39389.1| 862|Homo sapiens ubiquitin protein ligase
Itch protein.
Length = 862
Score = 29.5 bits (63), Expect = 7.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 157 PIPKTAEETIDYKSKELYIDNIEKDTTAD 243
P+P E+ +D + Y+D++EK TT D
Sbjct: 286 PLPPGWEQRVDQHGRVYYVDHVEKRTTWD 314
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,183,641
Number of Sequences: 237096
Number of extensions: 1105258
Number of successful extensions: 2010
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2002
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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