Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_B04
(503 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY095024-1|AAM11352.1| 247|Drosophila melanogaster LD05344p pro... 131 6e-31
AE014134-810|AAF52176.1| 247|Drosophila melanogaster CG8849-PA ... 131 6e-31
X61209-1|CAA43523.1| 1447|Drosophila melanogaster DNA topoisomer... 28 6.2
BT010240-1|AAQ23558.1| 1157|Drosophila melanogaster RE49802p pro... 28 6.2
AE014134-3099|AAF53802.2| 1447|Drosophila melanogaster CG10223-P... 28 6.2
AY089293-1|AAL90031.1| 462|Drosophila melanogaster AT08706p pro... 28 8.3
AE013599-3437|AAF46880.1| 122|Drosophila melanogaster CG13511-P... 28 8.3
AE013599-2034|AAF58152.1| 481|Drosophila melanogaster CG8102-PA... 28 8.3
AE013599-2033|AAM68529.1| 462|Drosophila melanogaster CG8102-PB... 28 8.3
>AY095024-1|AAM11352.1| 247|Drosophila melanogaster LD05344p
protein.
Length = 247
Score = 131 bits (316), Expect = 6e-31
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = +1
Query: 70 SPXKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAV 249
S + TD EWR+TEEG+KVRVSL S RIIPIP+T +T DYK+ YI+ EKDT V
Sbjct: 155 SDLQGTDFEWRFTEEGEKVRVSLRSGRIIPIPETNNQTHDYKTPNAYIER-EKDTPGAVV 213
Query: 250 TKITFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
+ITF PKL TFEMDIMEEMGIKE+R P KSYWY
Sbjct: 214 GEITFQPKLSTFEMDIMEEMGIKEERTPVKSYWY 247
Score = 34.3 bits (75), Expect = 0.095
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 15 IQSEAPLLVTTDVKLVDPESLXG 83
I+SEAPL VT D++LVDP L G
Sbjct: 137 IKSEAPLHVTKDIRLVDPSDLQG 159
>AE014134-810|AAF52176.1| 247|Drosophila melanogaster CG8849-PA
protein.
Length = 247
Score = 131 bits (316), Expect = 6e-31
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = +1
Query: 70 SPXKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAV 249
S + TD EWR+TEEG+KVRVSL S RIIPIP+T +T DYK+ YI+ EKDT V
Sbjct: 155 SDLQGTDFEWRFTEEGEKVRVSLRSGRIIPIPETNNQTHDYKTPNAYIER-EKDTPGAVV 213
Query: 250 TKITFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
+ITF PKL TFEMDIMEEMGIKE+R P KSYWY
Sbjct: 214 GEITFQPKLSTFEMDIMEEMGIKEERTPVKSYWY 247
Score = 34.3 bits (75), Expect = 0.095
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 15 IQSEAPLLVTTDVKLVDPESLXG 83
I+SEAPL VT D++LVDP L G
Sbjct: 137 IKSEAPLHVTKDIRLVDPSDLQG 159
>X61209-1|CAA43523.1| 1447|Drosophila melanogaster DNA topoisomerase
type II protein.
Length = 1447
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 226 KDTTADAVTKITFAPKLRTFEMDIMEE 306
KD T+ITF+P L F+MD ++E
Sbjct: 188 KDFNGTDYTRITFSPDLAKFKMDRLDE 214
>BT010240-1|AAQ23558.1| 1157|Drosophila melanogaster RE49802p
protein.
Length = 1157
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 226 KDTTADAVTKITFAPKLRTFEMDIMEE 306
KD T+ITF+P L F+MD ++E
Sbjct: 73 KDFNGTDYTRITFSPDLAKFKMDRLDE 99
>AE014134-3099|AAF53802.2| 1447|Drosophila melanogaster CG10223-PA
protein.
Length = 1447
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 226 KDTTADAVTKITFAPKLRTFEMDIMEE 306
KD T+ITF+P L F+MD ++E
Sbjct: 188 KDFNGTDYTRITFSPDLAKFKMDRLDE 214
>AY089293-1|AAL90031.1| 462|Drosophila melanogaster AT08706p
protein.
Length = 462
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = -3
Query: 360 LVLIPVTFG-GNPILFYTHFFHN----VHFKGPEFWRKSYLSNSIC-SGVLFNII 214
++L+ V G G I++ + F+N +HF E + L NS+C +G+ F+++
Sbjct: 147 ILLVGVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGIKFDVM 201
>AE013599-3437|AAF46880.1| 122|Drosophila melanogaster CG13511-PA
protein.
Length = 122
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 145 CWPMTLVPYLLLQCISILHQ*P 80
CWP +PY + C S+ H P
Sbjct: 90 CWPFICLPYFINYCKSVQHYCP 111
>AE013599-2034|AAF58152.1| 481|Drosophila melanogaster CG8102-PA,
isoform A protein.
Length = 481
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = -3
Query: 360 LVLIPVTFG-GNPILFYTHFFHN----VHFKGPEFWRKSYLSNSIC-SGVLFNII 214
++L+ V G G I++ + F+N +HF E + L NS+C +G+ F+++
Sbjct: 166 ILLVGVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGIKFDVM 220
>AE013599-2033|AAM68529.1| 462|Drosophila melanogaster CG8102-PB,
isoform B protein.
Length = 462
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = -3
Query: 360 LVLIPVTFG-GNPILFYTHFFHN----VHFKGPEFWRKSYLSNSIC-SGVLFNII 214
++L+ V G G I++ + F+N +HF E + L NS+C +G+ F+++
Sbjct: 147 ILLVGVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGIKFDVM 201
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,514,944
Number of Sequences: 53049
Number of extensions: 306534
Number of successful extensions: 711
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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