Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_B04
(503 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80448-1|AAB37815.1| 278|Caenorhabditis elegans Hypothetical pr... 87 5e-18
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z72508-8|CAA96640.2| 366|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 3.3
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 28 3.3
Z92829-14|CAB07342.2| 337|Caenorhabditis elegans Hypothetical p... 27 7.7
>U80448-1|AAB37815.1| 278|Caenorhabditis elegans Hypothetical
protein F59A3.3 protein.
Length = 278
Score = 87.4 bits (207), Expect = 5e-18
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 88 DVEWRYTEEGDK-VRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITF 264
+ W+ GD+ +RVS S IPIP A+ T +Y E YI+ KDT ADAV + T+
Sbjct: 190 EARWQLNGPGDEYIRVSTRSGYEIPIPSQAKVTYEYLQPENYIEVEGKDTPADAVLERTY 249
Query: 265 APKLRTFEMDIMEEMGIKEDRVPAKSYWY 351
PK+ +FE +IMEEMGIKE+R P ++WY
Sbjct: 250 MPKVASFEQEIMEEMGIKEERTPKPTFWY 278
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 9/49 (18%)
Frame = +1
Query: 187 DYKS--KELYIDNIEKD-------TTADAVTKITFAPKLRTFEMDIMEE 306
DYKS K+ +I N+ +D +T + TKITF+P L F+M +++
Sbjct: 220 DYKSAFKQTWIKNMTRDEEPKIVKSTDEDFTKITFSPDLAKFKMKELDD 268
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 9/49 (18%)
Frame = +1
Query: 187 DYKS--KELYIDNIEKD-------TTADAVTKITFAPKLRTFEMDIMEE 306
DYKS K+ +I N+ +D +T + TKITF+P L F+M +++
Sbjct: 220 DYKSAFKQTWIKNMTRDEEPKIVKSTDEDFTKITFSPDLAKFKMKELDD 268
>Z72508-8|CAA96640.2| 366|Caenorhabditis elegans Hypothetical
protein F28H7.9 protein.
Length = 366
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = -3
Query: 324 ILFYTHFFHNVHFKGPEFWRKSYLSNSICSGVLFNIINVQLFTLVINCFFGCFRNGYDS 148
+L Y F P F Y +N + LF N+ F + CF CF Y++
Sbjct: 82 VLLYFQFHDAESMNDPSFADLIYTANYTRTICLFVAFNMLPFLVFERCFATCFAGTYEN 140
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/75 (22%), Positives = 30/75 (40%)
Frame = +1
Query: 88 DVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITFA 267
D W + E +R+ + + I TAE S++ +I NI T + + T
Sbjct: 1779 DKSWLFDESLSLLRIEKLTGKSAQISCTAENKAGTASRDFFIQNIAAPTFKNEGDQETIF 1838
Query: 268 PKLRTFEMDIMEEMG 312
+ T +D +G
Sbjct: 1839 RESETITLDCPVSLG 1853
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/75 (22%), Positives = 30/75 (40%)
Frame = +1
Query: 88 DVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITFA 267
D W + E +R+ + + I TAE S++ +I NI T + + T
Sbjct: 1779 DKSWLFDESLSLLRIEKLTGKSAQISCTAENKAGTASRDFFIQNIAAPTFKNEGDQETIF 1838
Query: 268 PKLRTFEMDIMEEMG 312
+ T +D +G
Sbjct: 1839 RESETITLDCPVSLG 1853
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/75 (22%), Positives = 30/75 (40%)
Frame = +1
Query: 88 DVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITFA 267
D W + E +R+ + + I TAE S++ +I NI T + + T
Sbjct: 1779 DKSWLFDESLSLLRIEKLTGKSAQISCTAENKAGTASRDFFIQNIAAPTFKNEGDQETIF 1838
Query: 268 PKLRTFEMDIMEEMG 312
+ T +D +G
Sbjct: 1839 RESETITLDCPVSLG 1853
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/75 (22%), Positives = 30/75 (40%)
Frame = +1
Query: 88 DVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITFA 267
D W + E +R+ + + I TAE S++ +I NI T + + T
Sbjct: 1779 DKSWLFDESLSLLRIEKLTGKSAQISCTAENKAGTASRDFFIQNIAAPTFKNEGDQETIF 1838
Query: 268 PKLRTFEMDIMEEMG 312
+ T +D +G
Sbjct: 1839 RESETITLDCPVSLG 1853
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/75 (22%), Positives = 30/75 (40%)
Frame = +1
Query: 88 DVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITFA 267
D W + E +R+ + + I TAE S++ +I NI T + + T
Sbjct: 1779 DKSWLFDESLSLLRIEKLTGKSAQISCTAENKAGTASRDFFIQNIAAPTFKNEGDQETIF 1838
Query: 268 PKLRTFEMDIMEEMG 312
+ T +D +G
Sbjct: 1839 RESETITLDCPVSLG 1853
>Z92829-14|CAB07342.2| 337|Caenorhabditis elegans Hypothetical
protein F10A3.8 protein.
Length = 337
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 342 TFGGNPILFYTHFFHNVHFKGPEFWRKSYLSNSICSGVLFNII 214
TFG L ++F +FW K Y+ S S +FN++
Sbjct: 39 TFGSYKYLMICFSICGIYFSCCDFWCKPYVHMSKNSFAIFNVL 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,721,171
Number of Sequences: 27780
Number of extensions: 166872
Number of successful extensions: 468
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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