Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_B03
         (396 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...   112   4e-27
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          23   4.1  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          23   4.1  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          23   4.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.4  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   5.4  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           22   7.1  

>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score =  112 bits (270), Expect = 4e-27
 Identities = 46/56 (82%), Positives = 51/56 (91%)
 Frame = +1

Query: 91  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 258
           MG AN+WYSHPR+YGQGSR  R+CSN HG+IRKYGLNICRQCFREYA DIGF+KLD
Sbjct: 1   MGFANLWYSHPRKYGQGSRFWRACSNNHGMIRKYGLNICRQCFREYAKDIGFRKLD 56


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 123 SQIRTRIPVMPILLQQAWLNPQVRFEHMQTVL 218
           +++R      P+LL +A LNP+   E M  ++
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 123 SQIRTRIPVMPILLQQAWLNPQVRFEHMQTVL 218
           +++R      P+LL +A LNP+   E M  ++
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 123 SQIRTRIPVMPILLQQAWLNPQVRFEHMQTVL 218
           +++R      P+LL +A LNP+   E M  ++
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 157  IGMTGILVRICEGENTKYLRGPF 89
            I   G+L   C G N+ Y+  P+
Sbjct: 3121 IEYNGLLTTACAGTNSSYMYTPY 3143


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 157  IGMTGILVRICEGENTKYLRGPF 89
            I   G+L   C G N+ Y+  P+
Sbjct: 3124 IEYNGLLTTACAGTNSSYMYTPY 3146


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 96  AHFKKLNCFSLTSNKLDTPFK 34
           +H+K++ C+SL    L   F+
Sbjct: 174 SHYKRIQCYSLKQRSLVDAFQ 194


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 123 SQIRTRIPVMPILLQQAWLNPQVRFEHMQTVL 218
           +++R      P+LL +A LNP+   E M  ++
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKSNREKMTQIM 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,148
Number of Sequences: 2352
Number of extensions: 7631
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31212099
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)