Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_A21
         (823 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S57284-1|AAB25906.1|  437|Caenorhabditis elegans S-adenosylhomoc...   374   e-104
M64306-1|AAA28062.1|  437|Caenorhabditis elegans S-adenosylhomoc...   374   e-104
AF043699-5|AAB97565.1|  437|Caenorhabditis elegans Hypothetical ...   374   e-104
U50199-6|AAA91266.1|  470|Caenorhabditis elegans Vacuolar h atpa...    29   4.0  
AF125959-3|AAD14731.1|  531|Caenorhabditis elegans Udp-glucurono...    28   7.0  

>S57284-1|AAB25906.1|  437|Caenorhabditis elegans
           S-adenosylhomocysteine hydrolase protein.
          Length = 437

 Score =  374 bits (920), Expect = e-104
 Identities = 174/227 (76%), Positives = 195/227 (85%)
 Frame = +2

Query: 140 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAXILKGARIAGSLHMTVQTAVL 319
           KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P+  LKGARIAG LHMT+QTAVL
Sbjct: 5   KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64

Query: 320 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 499
           IETL  LGAEVQWSS NI+STQD AAAA+   G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65  IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124

Query: 500 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVND 679
           +PLNMILDDGGDLTNLVH KYP  L  ++G++EETTTGVHNL KM  +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184

Query: 680 SVTKSKFDNLYGCRESLLDGIKRATDIMIAGKVCVXAGYGDVGKGCA 820
           SVTKSKFDNLYG RESL DGIKRATD+M+AGKV V AGYGDVGKG A
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSA 231


>M64306-1|AAA28062.1|  437|Caenorhabditis elegans
           S-adenosylhomocysteine hydrolase protein.
          Length = 437

 Score =  374 bits (920), Expect = e-104
 Identities = 174/227 (76%), Positives = 195/227 (85%)
 Frame = +2

Query: 140 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAXILKGARIAGSLHMTVQTAVL 319
           KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P+  LKGARIAG LHMT+QTAVL
Sbjct: 5   KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64

Query: 320 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 499
           IETL  LGAEVQWSS NI+STQD AAAA+   G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65  IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124

Query: 500 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVND 679
           +PLNMILDDGGDLTNLVH KYP  L  ++G++EETTTGVHNL KM  +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184

Query: 680 SVTKSKFDNLYGCRESLLDGIKRATDIMIAGKVCVXAGYGDVGKGCA 820
           SVTKSKFDNLYG RESL DGIKRATD+M+AGKV V AGYGDVGKG A
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSA 231


>AF043699-5|AAB97565.1|  437|Caenorhabditis elegans Hypothetical
           protein K02F2.2 protein.
          Length = 437

 Score =  374 bits (920), Expect = e-104
 Identities = 174/227 (76%), Positives = 195/227 (85%)
 Frame = +2

Query: 140 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAXILKGARIAGSLHMTVQTAVL 319
           KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P+  LKGARIAG LHMT+QTAVL
Sbjct: 5   KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64

Query: 320 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 499
           IETL  LGAEVQWSS NI+STQD AAAA+   G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65  IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124

Query: 500 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVND 679
           +PLNMILDDGGDLTNLVH KYP  L  ++G++EETTTGVHNL KM  +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184

Query: 680 SVTKSKFDNLYGCRESLLDGIKRATDIMIAGKVCVXAGYGDVGKGCA 820
           SVTKSKFDNLYG RESL DGIKRATD+M+AGKV V AGYGDVGKG A
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSA 231


>U50199-6|AAA91266.1|  470|Caenorhabditis elegans Vacuolar h atpase
           protein 15 protein.
          Length = 470

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 563 PDLLKDVKGITEETTTGVHNL 625
           PDL  DVK +TEE T  VH+L
Sbjct: 316 PDLEDDVKFLTEELTLSVHDL 336


>AF125959-3|AAD14731.1|  531|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein14 protein.
          Length = 531

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 629 KMFREGLLKVPAINVNDSVTKSKFDNLYGCRESL 730
           +M+   LLK+P+I +  SV    F+N +G   SL
Sbjct: 154 EMYLAHLLKIPSIPIKSSVRYPAFNNAFGQPSSL 187


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,046,014
Number of Sequences: 27780
Number of extensions: 413420
Number of successful extensions: 970
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)