Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_A19
(686 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 34 0.017
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.27
SPBC21D10.07 |||UPF0287 family protein|Schizosaccharomyces pombe... 29 0.83
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 27 1.9
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 27 2.5
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 27 3.4
SPCC569.06 |||S. pombe specific multicopy membrane protein famil... 26 5.9
SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyc... 25 7.8
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 25 7.8
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 34.3 bits (75), Expect = 0.017
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 199 ELWDQYDNLAAHTHKGIEFLDKYGNFVKERCAIELEYAGKLRRLVKNYQPKRKEE 363
EL D + + + + G ++L+ + KER +IE EYA KL L Y K+ +
Sbjct: 11 ELHDDFKVVDSWINNGAKWLEDIQLYYKERSSIEKEYAQKLASLSNKYGEKKSRK 65
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 30.3 bits (65), Expect = 0.27
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 358 EEDEYQYTACKAFKQLLQELGDFAGQREVVAEN--LQSNVVRELHLLAKELREERKQH 525
E D Y Y A + L+ G F V E L ++++ + H L +ELR+E+ QH
Sbjct: 385 ERDLYPYQMKLASLENLRVNGKFLASDHSVPEGQELVNSLLTQCHQLIEELRDEKHQH 442
>SPBC21D10.07 |||UPF0287 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 104
Score = 28.7 bits (61), Expect = 0.83
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 433 QREVVAENLQSNVVRELHLLAKELREERKQ-HLNEGA 540
+++V+ EN + + E L + L++ERK+ H NEGA
Sbjct: 63 RKKVIEENRKKEEIEERILTDRILQQERKKSHANEGA 99
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 27.5 bits (58), Expect = 1.9
Identities = 22/81 (27%), Positives = 29/81 (35%)
Frame = +1
Query: 259 DKYGNFVKERCAIELEYAGKLRRLVKNYQPKRKEEDEYQYTACKAFKQLLQELGDFAGQR 438
DKY R L +L + + P R + +Q K L Q L DF G
Sbjct: 230 DKYSILSAARLRSRLRMGLSSEQLSEMF-PNRMDFSRFQIERLKERNDLTQRLMDFTGMN 288
Query: 439 EVVAENLQSNVVRELHLLAKE 501
E + S RE L+ E
Sbjct: 289 EFGPSRVVSEKNREYILVKNE 309
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -1
Query: 524 CCFLSSRNSLASRCNSRTTFD*RFSATTSRCPAKSPNSCSNCLNALH 384
CC SSR++ SR N T +R P CS+ +NA H
Sbjct: 448 CCLASSRSTSISRKNRYTDI---VPYDKTRVRLAVPKGCSDYINASH 491
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 575 EPIEVFRTPICFAPSFKCCFLSSRNSLASRCNSRTT 468
EP + P+C+AP LS R S + C S +
Sbjct: 163 EPDDFVECPVCYAPLSSFKTLSERESHVANCLSNNS 198
>SPCC569.06 |||S. pombe specific multicopy membrane protein family
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 478
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 370 YQYTACKAFKQLLQELGDFAGQREVVAENLQSNVVREL 483
Y + +AFK ++ G ++G V ENL+ ++V L
Sbjct: 116 YHPSPFQAFKHIIDNGGKYSGLDRVFLENLRKSLVVSL 153
>SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/47 (21%), Positives = 25/47 (53%)
Frame = +1
Query: 313 GKLRRLVKNYQPKRKEEDEYQYTACKAFKQLLQELGDFAGQREVVAE 453
GKL++++K + K++++ ++ +G F ++E +AE
Sbjct: 282 GKLKKILKMLEKDSKKDEKTKFEESDICISQCSSMGSFGPKQEYIAE 328
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 25.4 bits (53), Expect = 7.8
Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
Frame = +1
Query: 283 ERCAIELEYAGKLRRLVKNYQPKRKEEDEYQYTACKAFKQLLQELG---DFAGQRE--VV 447
E+ A+EL+Y+ L+ + E+E + K F++ G D +E V+
Sbjct: 706 EKQALELKYSSLKNELINAQNLLDRREEELSELSKKLFEERKIRSGSNDDIEKNKEINVL 765
Query: 448 AENLQSNVVRELHLLAKELR-EERKQHLNEGAKQMGVLNTSI 570
L + + HL + ++ ++ HLN G ++ + ++
Sbjct: 766 NSELADKLAQIRHLESDKMELDKLVHHLNRGIEEANIEENAV 807
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,814,347
Number of Sequences: 5004
Number of extensions: 59480
Number of successful extensions: 167
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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