Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_A17
(744 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0124 + 901034-901153,901455-901481,901713-901792,903739-90... 39 0.005
01_05_0473 - 22549178-22549532,22549612-22550576 32 0.42
02_05_1331 + 35736543-35736638,35737407-35737525,35737670-357377... 30 1.7
12_01_0214 + 1621019-1621194,1623476-1623541,1623677-1623704,162... 29 2.9
10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454 29 2.9
05_01_0413 - 3253345-3253461,3253595-3253666,3253763-3253876,325... 29 2.9
12_02_0637 - 21437244-21438080 29 5.2
12_02_0544 - 20179129-20179336,20179443-20179594,20179706-201798... 29 5.2
11_01_0213 + 1679792-1679838,1679959-1679986,1680331-1680573,168... 29 5.2
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 29 5.2
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 29 5.2
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943... 29 5.2
09_02_0555 - 10588685-10592038 28 6.8
05_07_0311 - 29139883-29140359,29140641-29140788,29140883-291409... 28 6.8
05_04_0123 + 18210069-18213737 28 6.8
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 28 6.8
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644 28 9.0
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 28 9.0
06_02_0211 - 13043968-13044646,13044752-13045037,13045903-130459... 28 9.0
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 28 9.0
02_05_0080 + 25665210-25665577,25665699-25666584 28 9.0
>02_01_0124 +
901034-901153,901455-901481,901713-901792,903739-903811,
904015-904072,904561-904615,905140-905164,905361-905421,
907416-907531,907661-907812,907918-908003,908182-908309,
908451-908501,908774-908860,908964-909033,909351-909407,
909729-909865,910313-910390,910971-911057
Length = 515
Score = 38.7 bits (86), Expect = 0.005
Identities = 32/118 (27%), Positives = 50/118 (42%)
Frame = +1
Query: 193 CRTTFEELHQVIKSIDKWKRVDVGNFRMDKDGNTMQQKVPAHRSAVYISELIDEICKKMD 372
C+ EL I S +D+ N R++ G + + S + + EL+D +C KM
Sbjct: 36 CKAVAAELEIGISSEKPRNHLDLRN-RLNSKGQREGKVIDYRVSELRVVELLDGLCDKMQ 94
Query: 373 DYVRVYYKSTGKLTIMQLMTKEGGMNPEFSKTKFVTDDDLNKSLEYYCERMFEDNEDE 546
DY +S K + K N F K +K+L +C R+ E+ EDE
Sbjct: 95 DYTLQKLESGEKGWV-----KVADWN-SFKTEKKAAARAHSKNLSSFCGRLLEETEDE 146
>01_05_0473 - 22549178-22549532,22549612-22550576
Length = 439
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +1
Query: 394 KSTGKLTIMQLMTKEGGMNPEFSKTKFVTDDDLNKSLEYYCERMFEDNE----DEITSLY 561
+ GK T+++ + E ++ FS+ DDLN E E F+ +E ++ +
Sbjct: 177 REVGKNTLIEHVCNEESVHEHFSRVVRFKSDDLNN--EENQESFFKTSELVASSTMSLVV 234
Query: 562 VKRPDDDVMPDAEREICFNHAKYCEEWMLPTEEDT 666
V+ +DD+ + R C + A C + ++ + +T
Sbjct: 235 VELVNDDISDETWRGFCSSIANGCSKMIVISRSET 269
>02_05_1331 + 35736543-35736638,35737407-35737525,35737670-35737715,
35738117-35738172,35738452-35738547,35738844-35738961,
35739406-35739672,35740023-35740124,35740302-35740659,
35740750-35740863,35741045-35741676,35741895-35742103,
35742597-35742819,35743419-35743538,35743888-35743914,
35744281-35745045,35745431-35748511
Length = 2142
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -3
Query: 454 QGSYRPPWSSAALSLVYRSTCSKRGRSHPSFCKSHQ*VRKCRPQI-GERALSAALCCHLC 278
QG R W S AL + C+ R + C+SHQ R RP + + + C H C
Sbjct: 1660 QGDLRETWGSEALK--WAMECTSRHLA----CRSHQIYRALRPSVKSDSCVLLMRCIHRC 1713
>12_01_0214 +
1621019-1621194,1623476-1623541,1623677-1623704,
1624041-1624247,1624426-1624584,1624696-1624736,
1625010-1625217
Length = 294
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 403 GKLTIMQLMTKEGGMNPEFSKTKFVTDDDLNKSLEYY 513
G L + L T G + E ++T VTDDD+ KS Y
Sbjct: 230 GILLVASLYTMLWGKSKEGNETDDVTDDDIEKSTHIY 266
>10_07_0032 + 12096290-12097042,12097056-12098066,12110194-12110454
Length = 674
Score = 29.5 bits (63), Expect = 2.9
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Frame = +1
Query: 370 DDYVRVYYKSTGKLTIMQLMTKEGGMNPEFSKTKFVTDDDLNKSLEYYCERMFEDNEDEI 549
DD+V Y + T + + TK G + P + +T K L E+ + +
Sbjct: 550 DDFV--YVRVTPLRGVHRFRTK-GKLAPRYVGPFRITARRGEKCLRVPSEQADSEQIEVR 606
Query: 550 TSL-YVKRPDDDVMPDAEREICFNHAKYCE-EWMLPTEEDTTWTREME 687
L YV+RP ++ ER ++C+ +W EE+ TW RE E
Sbjct: 607 EDLTYVERPVK-ILDTMERRTRNRVIRFCKVQWSNHAEEEATWEREDE 653
>05_01_0413 -
3253345-3253461,3253595-3253666,3253763-3253876,
3254050-3254163,3254420-3254520,3254616-3254694,
3254789-3254863,3254955-3255017,3255281-3255361,
3255449-3255574,3255898-3256022,3256722-3256839,
3257420-3257554,3258029-3258175,3259016-3259321
Length = 590
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -3
Query: 739 ARPQSRTGPARGP*HTPPPFLWSKSCPLQWVTSTPRN 629
A+ Q R GP R P H P P L S + +TS RN
Sbjct: 551 AKLQPREGPERKPKHPPQPLLKVLSFVTRLLTSQKRN 587
>12_02_0637 - 21437244-21438080
Length = 278
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 517 ERMFEDNEDEITSLYVKRPDDDVMPDAEREICFNHAKYCE-EWMLPTEEDTTWTREMEEE 693
E E E + Y+++P ++ +ER ++C+ +W +EE++TW RE E +
Sbjct: 201 EANIEQIEVQEDLTYIEKPIR-ILETSERRTRNRVIRFCKVQWSNHSEEESTWEREDELK 259
Query: 694 YVKVH 708
H
Sbjct: 260 SAHPH 264
>12_02_0544 -
20179129-20179336,20179443-20179594,20179706-20179864,
20179989-20180232,20180719-20180835,20181730-20181905
Length = 351
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 403 GKLTIMQLMTKEGGMNPEFSKTKFVTDDDLNKSLEYY 513
G L + L T G + E ++T VTDDD+ KS Y
Sbjct: 287 GILLVGSLYTMLWGKSKEGNETDDVTDDDIEKSTHIY 323
>11_01_0213 +
1679792-1679838,1679959-1679986,1680331-1680573,
1680705-1680863,1680975-1681126,1681235-1681442
Length = 278
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 403 GKLTIMQLMTKEGGMNPEFSKTKFVTDDDLNKSLEYY 513
G L + L T G + E ++T VTDDD+ KS Y
Sbjct: 214 GILLVGSLYTMLWGKSKEGNETDDVTDDDIEKSTHIY 250
>07_03_1353 -
25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 409 LTIMQLMTKEGGMNPEFSKTKFVTDDDLNKSLEYYCERMFED 534
L ++++ TK G+NP++ V+ K++E +C R+ +D
Sbjct: 300 LDLVRIYTKPKGLNPDYEDPVIVSSK--KKTVEDFCNRIHKD 339
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 433 KEGGMNPEFSKTKFVTDDDLNKSLEYYCERMFEDNEDEITSLYVKRPDDDVMPDAERE 606
++ G P+ S KF DDD+ S + ++ +EDE + +K ++ D+E+E
Sbjct: 424 RKRGSTPKSSSKKFDDDDDITPSKKRNKALEYDTDEDEDDADPMKSDSEEDDYDSEKE 481
>03_02_0555 +
9431451-9431688,9432685-9432803,9432886-9433079,
9433174-9433430,9433544-9433650,9433715-9433888,
9434359-9434490,9434776-9434955,9435062-9435265
Length = 534
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Frame = +1
Query: 460 SKTKFVTDDDLNKSLEYYCERMFEDNEDEI------TSLYVKRPDDDVMPDAERE 606
SKT +V + Y +R+ E+ +EI +++Y+K +D+V DA RE
Sbjct: 271 SKTLYVARAQKKAERKQYLQRLHEEKRNEIITKSNGSNVYIKNINDEVGDDALRE 325
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 559 YVKRPDDDVMPDAEREICFNHAKYCE-EWMLPTEEDTTWTREME 687
YV+RP ++ ER ++C+ +W EE+ TW RE E
Sbjct: 1054 YVERPVK-ILDTMERRTRNRVIRFCKVQWSNHAEEEATWEREDE 1096
>05_07_0311 -
29139883-29140359,29140641-29140788,29140883-29140959,
29141227-29141387,29141785-29142803,29142905-29142996,
29143117-29143256,29143397-29143574
Length = 763
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 313 AHRSAVYISELIDEICKKMDDYVRVYYKSTGKLTIMQLM-TKEGGMNPEFSKTKFVTDDD 489
AHRS + + + ++C +M +R +Y +T ++++ GG+ E SK +
Sbjct: 76 AHRSVLTQNSDVADLCNQMMLKLRDFYDPNKIITKLKVIPASPGGVATE-SKRAQASWVV 134
Query: 490 LNKSLEYYCERMFEDNEDEITSLYVKRP 573
L+K L++ +R E+ + I ++ RP
Sbjct: 135 LDKELKHEEKRCMEELQCNIVAMKRSRP 162
>05_04_0123 + 18210069-18213737
Length = 1222
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = -1
Query: 642 PLLAILGVVEAYLAFRVRHDVIVGSLHVQRRDLVFIVFKHTFAVILQAFVQVVVGHELGL 463
P++ I G+ + LA V +DV V + H Q+ V + + VI++ + +G++ GL
Sbjct: 190 PIVGIGGLGKTTLAQLVFNDVKVKA-HFQKHMWVCVSENFSVPVIVKGIIDTAIGNDCGL 248
Query: 462 R 460
+
Sbjct: 249 K 249
>02_05_0672 + 30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1
Query: 607 ICFNHAKYCEE--WMLPTEEDT--TWTREMEEEYVKVHGPDPYGFG 732
+ F+H+K+CEE W ED W E +++ ++++ + G G
Sbjct: 937 LIFHHSKFCEEFSWKFGVSEDVEEAWRHESDKKPMQLNEEELLGQG 982
>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
Length = 581
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 517 ERMFEDNEDEITSLYVKRPDDDVMPDAEREICFNHAKYCE-EWMLPTEEDTTWTREMEEE 693
E E E + YV++P ++ ER ++C+ +W +EE++TW RE E +
Sbjct: 504 EANLEQIEVQEDLTYVEKPIR-ILETNERRTRNRVIRFCKVQWSNHSEEESTWEREDELK 562
Query: 694 YVKVH 708
H
Sbjct: 563 SAHPH 567
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 559 YVKRPDDDVMPDAEREICFNHAKYCE-EWMLPTEEDTTWTREMEEEYVKVH 708
YV++P ++ +ER ++C+ +W +EE++TW RE E + H
Sbjct: 1613 YVEKPVR-ILEVSERNTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPH 1662
>06_02_0211 -
13043968-13044646,13044752-13045037,13045903-13045979,
13046039-13046139,13046348-13046412,13048296-13048581
Length = 497
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 216 SPGDKKH-R*MEKSRCRQLQNGQRWQHNAAESARSPICG 329
+P ++ H +E+SR R + W HN + +RSP G
Sbjct: 390 NPRERPHDMYLERSRRRSVSPRDNWGHNMRDRSRSPAGG 428
>04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 517 ERMFEDNEDEITSLYVKRPDDDVMPDAEREICFNHAKYCE-EWMLPTEEDTTWTREMEEE 693
E E E + YV++P ++ ER ++C+ +W +EE++TW RE E +
Sbjct: 1211 EANLEQIEVQEDLTYVEKPIR-ILETNERRTRNRVIRFCKVQWSNHSEEESTWEREDELK 1269
Query: 694 YVKVH 708
H
Sbjct: 1270 SAHPH 1274
>02_05_0080 + 25665210-25665577,25665699-25666584
Length = 417
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -1
Query: 396 LVVNADVVIHLFANLINKFGNVDRRSVSGHFLLHCVAIFVHSEVADIDSFPFI 238
++ D+V HLF+ I+ F V R+V+ L+ VH++ +D+ P +
Sbjct: 174 VLTREDIVRHLFSYSISLFAPVAARTVASLGLVRRDVHAVHADDDALDAIPLL 226
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,968,499
Number of Sequences: 37544
Number of extensions: 408095
Number of successful extensions: 1256
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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