Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_A16
         (793 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1458 + 37512954-37513112,37513217-37513324,37513357-375134...   242   2e-64
05_04_0448 - 21349877-21349990,21350263-21350338,21350418-213505...   205   3e-53
03_02_0486 - 8811539-8811610,8811725-8812231,8812327-8812551,881...   188   4e-48
06_03_1034 - 27044892-27044983,27045189-27045216,27045514-270459...   111   5e-25
04_02_0036 - 9033411-9033746,9033961-9034032,9034122-9034222,903...    58   8e-09
07_03_1690 - 28716998-28717091,28717203-28717897,28718264-287184...    31   1.4  
03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394     29   3.2  
07_03_0984 - 23131468-23131679,23132082-23132209,23132300-231323...    29   4.2  
05_07_0076 - 27520152-27520379,27520785-27521096,27521194-275213...    29   4.2  
03_05_0170 + 21482962-21483018,21483133-21483183,21483313-214835...    29   5.6  
02_02_0707 + 13144147-13144788,13145115-13148663                       29   5.6  

>01_06_1458 +
           37512954-37513112,37513217-37513324,37513357-37513431,
           37513520-37513581,37513690-37513756,37514161-37514274,
           37514357-37514443,37514571-37514641,37514718-37514783,
           37514941-37515027,37515127-37515202,37515321-37515424,
           37515550-37515583
          Length = 369

 Score =  242 bits (593), Expect = 2e-64
 Identities = 128/246 (52%), Positives = 164/246 (66%), Gaps = 20/246 (8%)
 Frame = +2

Query: 107 MTQQGPAFDVNAMTLTRWVLAQQRTAPTATGDLTQLLNSIQTAVKAIQSAVRKAGIAKLH 286
           M  +  A+  + MT+TR+VL +Q   P A GDLT LL+ I    K + SAV KAG+AKL 
Sbjct: 1   MDHEADAYRTDLMTITRYVLNEQSRNPEARGDLTILLSHIVLGCKFVASAVNKAGLAKLI 60

Query: 287 GISGDTNVQ--------------------GEEVKKLDVLSNDLFINMLKSSFTTCLLVSE 406
           G++G+TNVQ                    GEE KKLDVLSN++F+  L SS  TC+LVSE
Sbjct: 61  GLAGETNVQASVPGNNCHLSQFLVSEIEIGEEQKKLDVLSNEVFVKALVSSGRTCVLVSE 120

Query: 407 ENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAIYKKKSEGDPVESDALKPGR 586
           E++    V+   RGKY VCFDPLDGSSNI+C VS+G+IF IY  K + +    D L+PG+
Sbjct: 121 EDEEATFVDPALRGKYCVCFDPLDGSSNIDCGVSIGTIFGIYMIKDKENVTLEDVLQPGK 180

Query: 587 ELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMKIPEKGKIYSINEGY 766
            +VAAGY +YGS+  +VLS   G GVNGF  DPS+GEFILT P++KIP+KGKIYS+NEG 
Sbjct: 181 NMVAAGYCMYGSSCTLVLS--TGNGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGN 238

Query: 767 AXEWDK 784
           A  WD+
Sbjct: 239 AKNWDE 244


>05_04_0448 -
           21349877-21349990,21350263-21350338,21350418-21350504,
           21350706-21350771,21350855-21350925,21351030-21351116,
           21351201-21351314,21351612-21351678,21351807-21351868,
           21351960-21352085,21352091-21352381
          Length = 386

 Score =  205 bits (501), Expect = 3e-53
 Identities = 99/172 (57%), Positives = 126/172 (73%)
 Frame = +2

Query: 266 AGIAKLHGISGDTNVQGEEVKKLDVLSNDLFINMLKSSFTTCLLVSEENQTVLQVETERR 445
           A I++ H  + +  VQGEE KKLDVLSN++F+  L SS  TC+LVSEEN+  + V+   R
Sbjct: 101 ASISRCH--TYEVAVQGEEQKKLDVLSNEVFVKALVSSGRTCVLVSEENEEAIIVDAPLR 158

Query: 446 GKYVVCFDPLDGSSNIECLVSVGSIFAIYKKKSEGDPVESDALKPGRELVAAGYALYGSA 625
           GKY VCFDPLDGSSNI+C VS+G+IF IY  K + +    D L+PG +++AAGY +YGS+
Sbjct: 159 GKYCVCFDPLDGSSNIDCGVSIGTIFGIYMIKDKDNVTLDDVLQPGTDMLAAGYCMYGSS 218

Query: 626 TMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMKIPEKGKIYSINEGYAXEWD 781
             +VLS   G GVNGF  DPS+GEFILT PN+KIP +GKIYS+NEG A  WD
Sbjct: 219 CTLVLS--TGNGVNGFTLDPSLGEFILTHPNIKIPNRGKIYSVNEGNAKNWD 268



 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 36/86 (41%), Positives = 48/86 (55%)
 Frame = +2

Query: 107 MTQQGPAFDVNAMTLTRWVLAQQRTAPTATGDLTQLLNSIQTAVKAIQSAVRKAGIAKLH 286
           M     A   + MT+TR VL +Q   P + GD T LL+ I    K + SAV KAG+AKL 
Sbjct: 1   MDHAAEAQRTDLMTITRHVLNEQGRHPESRGDFTILLSHIVLGCKFVASAVNKAGLAKLI 60

Query: 287 GISGDTNVQGEEVKKLDVLSNDLFIN 364
           G++GDTNVQ        + S  LF++
Sbjct: 61  GLAGDTNVQASNPISDPLYSTLLFLH 86


>03_02_0486 -
           8811539-8811610,8811725-8812231,8812327-8812551,
           8812648-8813064
          Length = 406

 Score =  188 bits (458), Expect = 4e-48
 Identities = 107/230 (46%), Positives = 140/230 (60%), Gaps = 14/230 (6%)
 Frame = +2

Query: 146 TLTRWVLAQQRTAPTATGDLTQLLNSIQTAVKAIQSAVRKAGIAKLHGISGDTNVQGEEV 325
           TLT W+L Q++ A T  G++T +L SI TA K I S V++A I+ L G+ G  NVQGE+ 
Sbjct: 72  TLTTWLLKQEQ-AGTIDGEMTIVLASISTACKQIASLVQRAPISNLTGVQGAVNVQGEDQ 130

Query: 326 KKLDVLSNDLFINMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLV 505
           KKLDV+SN++F N LKSS  T ++ SEE    + VE    G Y+V FDPLDGSSNI+  V
Sbjct: 131 KKLDVVSNEVFSNCLKSSGRTGVIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAV 190

Query: 506 SVGSIFAIYKKKSEG----------DPVESDAL----KPGRELVAAGYALYGSATMMVLS 643
           S GSIF IY    E           D VE   +    +PG  L+AAGY +Y S+ + VL+
Sbjct: 191 STGSIFGIYSPNDECLADIADDQNLDQVEQRCIVSVCQPGSNLLAAGYCMYSSSVIFVLT 250

Query: 644 LGKGKGVNGFMYDPSIGEFILTDPNMKIPEKGKIYSINEGYAXEWDKGLQ 793
           +  G GV  F  DP  GEF+LT   ++IP+ GKIY+ NEG    WD  L+
Sbjct: 251 I--GTGVYVFTLDPMYGEFVLTQEKVQIPKAGKIYAFNEGNYALWDDKLK 298


>06_03_1034 -
           27044892-27044983,27045189-27045216,27045514-27045908,
           27046224-27046312,27046352-27046620,27047037-27047270
          Length = 368

 Score =  111 bits (268), Expect = 5e-25
 Identities = 74/205 (36%), Positives = 109/205 (53%), Gaps = 4/205 (1%)
 Frame = +2

Query: 191 ATGDLTQLLNSIQTAVKAIQSAVRKAGIAKL-HGISGD--TNVQGEEVKK-LDVLSNDLF 358
           A  DL  L+  +Q+A K I + V   G A+L  G +G       G +  K LD LSN++ 
Sbjct: 23  AADDLVVLVAHVQSACKRIAALVASPGNAELSRGKAGGGVAVAAGRDAPKPLDELSNEII 82

Query: 359 INMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAIYKK 538
           ++ L+ S    ++ SEEN   + V  +    YVV  DPLDGS NIE  +  G+IF IY +
Sbjct: 83  LSSLRRSGKVAVMASEENHLPIWVSND--SPYVVVTDPLDGSRNIEVSIPTGTIFGIYNR 140

Query: 539 KSEGDPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDPN 718
            +E D +  +       L         S T +V S G G G +GF  D   GEF+LT P+
Sbjct: 141 LAELDHLPEEERAQLNSLQ--------SGTHLVAS-GFGAGTHGFTLDHLTGEFVLTHPS 191

Query: 719 MKIPEKGKIYSINEGYAXEWDKGLQ 793
           ++IP +G+IYS+N+    +W +GL+
Sbjct: 192 IQIPPRGQIYSVNDARYFDWPEGLR 216


>04_02_0036 -
           9033411-9033746,9033961-9034032,9034122-9034222,
           9034309-9034530,9034832-9034913,9035029-9035214,
           9035311-9035445,9035543-9035641
          Length = 410

 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 48/166 (28%), Positives = 77/166 (46%)
 Frame = +2

Query: 179 TAPTATGDLTQLLNSIQTAVKAIQSAVRKAGIAKLHGISGDTNVQGEEVKKLDVLSNDLF 358
           T  T   +L +LL  +  A++ I   VR A      G +   N  G+E   +D+L++ L 
Sbjct: 83  TKATPDKNLIRLLICMGEAMRTISFKVRTASC----GGTACVNSFGDEQLAVDMLADKLL 138

Query: 359 INMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAIYKK 538
              L+ S       SEE   +  +     G + V FDPLDGSS ++   +VG+IF ++  
Sbjct: 139 FEALEYSHVCKYACSEEVPELQDMGGPVDGGFSVAFDPLDGSSIVDTNFTVGTIFGVW-- 196

Query: 539 KSEGDPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFM 676
              GD +       G + VAA   +YG  T  +++L    G + F+
Sbjct: 197 --PGDKLTG---VTGGDQVAAAMGIYGPRTTYIIALKDCPGTHEFL 237


>07_03_1690 -
           28716998-28717091,28717203-28717897,28718264-28718446,
           28718552-28719585,28719805-28719978,28720051-28720168,
           28720339-28720521,28720647-28720739,28720981-28721166,
           28722247-28722507
          Length = 1006

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
 Frame = +2

Query: 443 RGKYVVCFDPLDGSSNIECLVSVGSIFAIYKKKSEGDPVESDALKPGRELVAAGYALYGS 622
           R KY+   DP+  S+N+   VS GS + I    S G    S  L    +L+     ++G 
Sbjct: 316 RPKYLNIIDPIKSSNNLGRSVSKGSFYRIRGAFSFGAQNLSQILMLPTDLIPT--EIFGF 373

Query: 623 ATMMVLSLGKGK----GVNGFMYDPSI---GEFILTDPNMKIPE 733
               + S G+GK    G NG  ++PS+    E+ L + +  + E
Sbjct: 374 FVNTLKSHGRGKRSDVGNNG-SFEPSLDPESEYALWEDSSDVKE 416


>03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394
          Length = 1456

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +2

Query: 41  ADISRNVLGSLYHFISRILSRTMTQQGPAFDVNAMTLTRWVLAQQRTAPTA 193
           +D+ R +L  LYH I R   +T  +QG  +    M+ +RW+   +++  T+
Sbjct: 735 SDLPREMLSELYHSICRNEIKTTPEQGMGY--FEMSPSRWIDLMRKSKSTS 783


>07_03_0984 -
           23131468-23131679,23132082-23132209,23132300-23132365,
           23134421-23134515,23135292-23135340,23135428-23135487,
           23135580-23135701,23135799-23135840,23135944-23135992,
           23136095-23136166,23136638-23136738,23136835-23136910,
           23137002-23137081,23137196-23137307,23137391-23137454,
           23137540-23137603,23138544-23138570
          Length = 472

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 19/69 (27%), Positives = 34/69 (49%)
 Frame = +2

Query: 368 LKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAIYKKKSE 547
           LKS  T  L +   +Q +L V ++R GKY   +     + ++E L  + S+ A+Y+  + 
Sbjct: 51  LKSIVTLALTLLTSSQAILIVWSKRAGKYE--YSVTTANFSVEALKCLLSLIALYRTWNS 108

Query: 548 GDPVESDAL 574
               E + L
Sbjct: 109 QGVTEDNRL 117


>05_07_0076 -
           27520152-27520379,27520785-27521096,27521194-27521333,
           27521893-27521956,27522071-27522277,27522350-27522493,
           27522578-27522709,27522880-27524294,27524647-27524920,
           27526096-27526129,27527028-27527059
          Length = 993

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 709 GKNELSYRRVVHEAVHALALSQRQDHHGSRTIQGIARSD 593
           G + L+     H   H + LS+R +   SRTIQG+ + D
Sbjct: 81  GNSPLALALYTHWFYHNIDLSERLNTRKSRTIQGLGKMD 119


>03_05_0170 +
           21482962-21483018,21483133-21483183,21483313-21483500,
           21483587-21483671,21483848-21483902,21483998-21484041,
           21485045-21485113,21485207-21485307,21485396-21485452,
           21485540-21485636
          Length = 267

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/60 (26%), Positives = 24/60 (40%)
 Frame = +2

Query: 311 QGEEVKKLDVLSNDLFINMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSN 490
           Q + V + D    DL  N L+  +     + EE    L    +         DPLDG++N
Sbjct: 36  QVDLVTETDKACEDLIFNHLRKHYPDHKFIGEETSAALGATADLTDDPTWIVDPLDGTTN 95


>02_02_0707 + 13144147-13144788,13145115-13148663
          Length = 1396

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 44  DISRNVLGSLYHFISRILSRTMTQQGPAFDVNAMTLTRWV 163
           D+ R  L  LY+ I R   RT+ +QG     + M+ +RWV
Sbjct: 676 DLPREFLSELYYSICRNEIRTIPEQGAG--CSEMSFSRWV 713


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,648,082
Number of Sequences: 37544
Number of extensions: 509696
Number of successful extensions: 1401
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)