Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_A15
(666 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 355 2e-99
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 355 3e-99
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 355 3e-99
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 170 1e-43
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 169 2e-43
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 88 9e-19
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 44 3e-05
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 42 1e-04
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 40 3e-04
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 33 0.037
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 31 0.11
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.26
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.46
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 29 0.80
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 1.4
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 1.4
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 27 2.4
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.4
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 26 4.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 4.2
SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|c... 25 7.4
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 7.4
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 25 7.4
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 9.8
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 25 9.8
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 355 bits (874), Expect = 2e-99
Identities = 165/221 (74%), Positives = 187/221 (84%)
Frame = +3
Query: 3 STXTGHLIYKCGGIDKRTIDKFEKEAQXMGKGSXXYAWVLDKLKAERERGIXIDIALWKX 182
ST TGHLIYKCGGIDKRTI+KFEKEA +GKGS YAWVLDKLKAERERGI IDIALWK
Sbjct: 21 STTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKF 80
Query: 183 EAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 362
E Y VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQTREHALLA
Sbjct: 81 ETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLA 140
Query: 363 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDN 542
+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDN
Sbjct: 141 YTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDN 198
Query: 543 MLEPSTKMPWFKGWQVERKEGKADGKCLIEALXAILPPARP 665
M+EP+T MPW++GWQ E K G GK L+EA+ +I PPARP
Sbjct: 199 MIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARP 239
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 355 bits (873), Expect = 3e-99
Identities = 164/221 (74%), Positives = 187/221 (84%)
Frame = +3
Query: 3 STXTGHLIYKCGGIDKRTIDKFEKEAQXMGKGSXXYAWVLDKLKAERERGIXIDIALWKX 182
ST TGHLIYKCGGIDKRTI+KFEKEA +GKGS YAWVLDKLKAERERGI IDIALWK
Sbjct: 21 STTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKF 80
Query: 183 EAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 362
E Y VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA
Sbjct: 81 ETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLA 140
Query: 363 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDN 542
+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDN
Sbjct: 141 YTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDN 198
Query: 543 MLEPSTKMPWFKGWQVERKEGKADGKCLIEALXAILPPARP 665
M+EP+T MPW++GWQ E K G GK L+EA+ +I PPARP
Sbjct: 199 MIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARP 239
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 355 bits (873), Expect = 3e-99
Identities = 164/221 (74%), Positives = 187/221 (84%)
Frame = +3
Query: 3 STXTGHLIYKCGGIDKRTIDKFEKEAQXMGKGSXXYAWVLDKLKAERERGIXIDIALWKX 182
ST TGHLIYKCGGIDKRTI+KFEKEA +GKGS YAWVLDKLKAERERGI IDIALWK
Sbjct: 21 STTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKF 80
Query: 183 EAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 362
E Y VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTREHALLA
Sbjct: 81 ETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLA 140
Query: 363 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDN 542
+TLGVKQLIV VNKMD+T +S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDN
Sbjct: 141 YTLGVKQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDN 198
Query: 543 MLEPSTKMPWFKGWQVERKEGKADGKCLIEALXAILPPARP 665
M+EP+T MPW++GWQ E K G GK L+EA+ +I PPARP
Sbjct: 199 MIEPTTNMPWYQGWQKETKAGVVKGKTLLEAIDSIEPPARP 239
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 170 bits (414), Expect = 1e-43
Identities = 94/224 (41%), Positives = 129/224 (57%), Gaps = 3/224 (1%)
Frame = +3
Query: 3 STXTGHLIYKCGGIDKRTIDKFEKEAQXMGKGSXXYAWVLDKLKAERERGIXIDIALWKX 182
ST G ++++ G I+ R++ K EA GKGS YAW+LD + ER RG+ +D+A
Sbjct: 191 STMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTF 250
Query: 183 EAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 362
E+ I DAPGHRDFI MI G S AD AVL+V + FE G +NGQTREHA L
Sbjct: 251 ESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLL 310
Query: 363 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY-IKKIGYNPAAVAFVPISGWHGD 539
LG+ +++V VNK+D +SE RF+EIK VS + IK +G+ + V FVPIS G
Sbjct: 311 RALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGT 368
Query: 540 NML--EPSTKMPWFKGWQVERKEGKADGKCLIEALXAILPPARP 665
N++ + S W+K G L+ AL ++PP +P
Sbjct: 369 NLIQKDSSDLYKWYK------------GPTLLSALDQLVPPEKP 400
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 169 bits (412), Expect = 2e-43
Identities = 79/197 (40%), Positives = 126/197 (63%), Gaps = 4/197 (2%)
Frame = +3
Query: 3 STXTGHLIYKCGGIDKRTIDKFEKEAQXMGKGSXXYAWVLDKLKAERERGIXIDIALWKX 182
ST G++++ G +DKRT++K E+EA+ GK S +W LD ERE+G +++
Sbjct: 252 STLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYF 311
Query: 183 EAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 362
E +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQTREHA+LA
Sbjct: 312 ETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLA 371
Query: 363 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI-GYNPAA-VAFVPISGWHG 536
T G+ L+V +NKMD +SE R++E ++S +++++ GYN V ++P+S + G
Sbjct: 372 RTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAYTG 431
Query: 537 DNMLE--PSTKMPWFKG 581
N+ + S+ PW++G
Sbjct: 432 QNVKDRVDSSVCPWYQG 448
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 88.2 bits (209), Expect = 9e-19
Identities = 50/129 (38%), Positives = 73/129 (56%)
Frame = +3
Query: 87 MGKGSXXYAWVLDKLKAERERGIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQ 266
+G+ S +DK E+ RGI I A + E + +D PGH D+IKNMITG +
Sbjct: 80 LGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAAT 139
Query: 267 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 446
D A+++V+A G+ QTREH LLA +GVKQ++V +NK+D EP E
Sbjct: 140 MDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVEM 192
Query: 447 EIKKEVSSY 473
E+++ +S Y
Sbjct: 193 EMRELLSEY 201
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 43.6 bits (98), Expect = 3e-05
Identities = 34/98 (34%), Positives = 48/98 (48%)
Frame = +3
Query: 117 VLDKLKAERERGIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 296
V+D L AER+RGI I+ A + +ID PGH DF + + D AV I+
Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-- 124
Query: 297 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 410
+ AG+ QT+ A G+ ++I VNKMD
Sbjct: 125 ---DGSAGV--EAQTKVVWKQATKRGIPKVIF-VNKMD 156
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/93 (24%), Positives = 42/93 (45%)
Frame = +3
Query: 198 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 377
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 378 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 476
K +I+ NK+D +E ++ I K + +
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSILKFIKGTV 195
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 39.9 bits (89), Expect = 3e-04
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 120 LDKLKAERERGIXIDIA----LWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 287
LDKL+ ER RGI + ++ Y + +ID PGH DF ++ + + +L+
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Query: 288 VAAGTG 305
V A G
Sbjct: 155 VDASQG 160
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 33.1 bits (72), Expect = 0.037
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 195 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 350
Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 145 YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 31.5 bits (68), Expect = 0.11
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 198 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 305
++T +D PGH F G + AD VL+VA G
Sbjct: 221 FITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.26
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 195 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 305
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.46
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 207 IIDAPGHRDFIKNMITGTSQADCAVLIV 290
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 28.7 bits (61), Expect = 0.80
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 123 DKLKAER-ERGIXIDIALWKXEAXXYYV--TIIDAPGHRDFIKN 245
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 195 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 290
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 195 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 290
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 427 TVSPDLRKSRRKYPHTSRRLATTQLL---SLSCPFLDGTETTCWSLQPKCLGSRDGRWSV 597
+ +PD+ ++PHT +R +T + L LSC + +E + P G +D + +
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRCLSCEYSTLSEASDSMSNPLFFGDQDNGYVI 204
Query: 598 RKA 606
++
Sbjct: 205 SQS 207
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +3
Query: 120 LDKLKAERERGIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 290
L++ + + + +A+ + + ID PGH DF+ + + +D VL+V
Sbjct: 184 LERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 26.2 bits (55), Expect = 4.2
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Frame = -2
Query: 332 VLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLGSFXLPESN-IDX 156
V +TS + TGS S+ L S ++ S+ + +L + +P ++ +
Sbjct: 64 VASNTSENYPYTGSKSLSSSSILSNSTISTSSSTPITASVPTSSSILSNSTIPTTSPVPT 123
Query: 155 DXXXXXXX*FVQYPSIXXGSFTHXLGLLLELIDGTFVNTTTFVDQ 21
+ +I S + +I G+ TTTFVDQ
Sbjct: 124 TSSTPTSSSILSNSTIPSSSSISASTITTTIISGSTQFTTTFVDQ 168
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 150 HAHAQPLVCPIPKHXXRILYPXPGPPSRTYRWY 52
H+H PL P+P +L P P P ++ WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRPPPVPQVPSH-WY 166
>SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = +3
Query: 150 GIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 296
G D ++K + + + + PGH D I+++ S LI A
Sbjct: 189 GCMNDAYIYKQNSHGKWKKVAELPGHTDLIRDICWAPSMGSSYYLIATA 237
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.4 bits (53), Expect = 7.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 84 PGPPSRTYRWYVCQYHHIC 28
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 25.4 bits (53), Expect = 7.4
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 405 MDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 575
+D +P + F IKK+V Y+ ++ + P + G N LEP TK PW+
Sbjct: 107 LDLKKPLLPQILFGNIKKDV--YLDQV-HRPRHYRGSGSAPLFG-NFLEPLTKTPWY 159
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 25.0 bits (52), Expect = 9.8
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 456 KEVS---SYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 581
KEVS SYI +P +G+ +N+++P + P FKG
Sbjct: 159 KEVSTSKSYISSGYLHPKTSPIFKKNGYATENVVDPISSSPRFKG 203
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 523 LDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLK 633
LD + W++QP C + DG A L++NA LK
Sbjct: 149 LDKLKDRLWNVQPTCALTGDGLLE-GLAWLSQNAKLK 184
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,706,493
Number of Sequences: 5004
Number of extensions: 55104
Number of successful extensions: 191
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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