Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_A15
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 388 e-108
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 388 e-108
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 184 4e-86
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 244 3e-65
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 196 2e-50
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 196 2e-50
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 171 5e-43
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 88 6e-18
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 85 6e-17
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 85 6e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 75 3e-14
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 75 3e-14
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 75 3e-14
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 40 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.008
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 37 0.015
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.14
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.32
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.56
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.56
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 31 0.97
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 31 0.97
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.2
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.2
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.2
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.2
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 29 3.0
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 29 3.0
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 27 9.1
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 388 bits (955), Expect = e-108
Identities = 182/221 (82%), Positives = 193/221 (87%)
Frame = +3
Query: 3 STXTGHLIYKCGGIDKRTIDKFEKEAQXMGKGSXXYAWVLDKLKAERERGIXIDIALWKX 182
ST TGHLIYKCGGIDKRTI+KFEKEAQ MGKGS YAWVLDKLKAERERGI IDIALWK
Sbjct: 21 STTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKF 80
Query: 183 EAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 362
E YY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA
Sbjct: 81 ETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLA 140
Query: 363 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDN 542
TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDN
Sbjct: 141 QTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDN 200
Query: 543 MLEPSTKMPWFKGWQVERKEGKADGKCLIEALXAILPPARP 665
MLE S+ MPWFKGW VERKEG A GK L+EAL +I+PP RP
Sbjct: 201 MLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRP 241
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 388 bits (955), Expect = e-108
Identities = 182/221 (82%), Positives = 193/221 (87%)
Frame = +3
Query: 3 STXTGHLIYKCGGIDKRTIDKFEKEAQXMGKGSXXYAWVLDKLKAERERGIXIDIALWKX 182
ST TGHLIYKCGGIDKRTI+KFEKEAQ MGKGS YAWVLDKLKAERERGI IDIALWK
Sbjct: 21 STTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKF 80
Query: 183 EAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 362
E YY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA
Sbjct: 81 ETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLA 140
Query: 363 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDN 542
TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDN
Sbjct: 141 QTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDN 200
Query: 543 MLEPSTKMPWFKGWQVERKEGKADGKCLIEALXAILPPARP 665
MLE S+ MPWFKGW VERKEG A GK L+EAL +I+PP RP
Sbjct: 201 MLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRP 241
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 184 bits (449), Expect(2) = 4e-86
Identities = 85/97 (87%), Positives = 88/97 (90%)
Frame = +3
Query: 3 STXTGHLIYKCGGIDKRTIDKFEKEAQXMGKGSXXYAWVLDKLKAERERGIXIDIALWKX 182
ST TGHLIYKCGGIDKRTI+KFEKEAQ MGKGS YAWVLDKLKAERERGI IDIALWK
Sbjct: 21 STTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKF 80
Query: 183 EAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 293
E YY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 81 ETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 151 bits (367), Expect(2) = 4e-86
Identities = 68/94 (72%), Positives = 77/94 (81%)
Frame = +3
Query: 384 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 563
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 564 MPWFKGWQVERKEGKADGKCLIEALXAILPPARP 665
MPWFKGW VERKEG A GK L+EAL +I+PP RP
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRP 207
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 244 bits (598), Expect = 3e-65
Identities = 120/152 (78%), Positives = 127/152 (83%)
Frame = +3
Query: 3 STXTGHLIYKCGGIDKRTIDKFEKEAQXMGKGSXXYAWVLDKLKAERERGIXIDIALWKX 182
ST TGHLIYKCGGIDKRTI+KFEKEAQ MGKGS YAWVLDKLKAERERGI IDIALWK
Sbjct: 21 STTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKF 80
Query: 183 EAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 362
E YY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA
Sbjct: 81 ETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLA 140
Query: 363 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 458
TLGVKQL V+ T P S R + I++
Sbjct: 141 QTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/69 (42%), Positives = 34/69 (49%)
Frame = +1
Query: 448 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENAS 627
+S + P +SRR T Q L D TETTC C GSRDG + RK L E S
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
Query: 628 LKLSMPSCH 654
+L PS H
Sbjct: 212 SRLLTPSSH 220
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 196 bits (477), Expect = 2e-50
Identities = 101/222 (45%), Positives = 143/222 (64%), Gaps = 1/222 (0%)
Frame = +3
Query: 3 STXTGHLIYKCGGIDKRTIDKFEKEAQXMGKGSXXYAWVLDKLKAERERGIXIDIALWKX 182
ST GHL++ +D RTIDKF+ EA GK S YAWVLD+ + ERERG+ +DI
Sbjct: 184 STLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSF 243
Query: 183 EAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 362
E + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL
Sbjct: 244 ETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLL 303
Query: 363 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGD 539
+LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+
Sbjct: 304 RSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGE 359
Query: 540 NMLEPSTKMPWFKGWQVERKEGKADGKCLIEALXAILPPARP 665
N+++ ++ W+ DG CL+E + + + P P
Sbjct: 360 NLIK-RMELDWY------------DGPCLLELIDSFVAPQPP 388
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 196 bits (477), Expect = 2e-50
Identities = 101/222 (45%), Positives = 143/222 (64%), Gaps = 1/222 (0%)
Frame = +3
Query: 3 STXTGHLIYKCGGIDKRTIDKFEKEAQXMGKGSXXYAWVLDKLKAERERGIXIDIALWKX 182
ST GHL++ +D RTIDKF+ EA GK S YAWVLD+ + ERERG+ +DI
Sbjct: 202 STLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSF 261
Query: 183 EAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 362
E + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL
Sbjct: 262 ETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLL 321
Query: 363 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGD 539
+LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+
Sbjct: 322 RSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGE 377
Query: 540 NMLEPSTKMPWFKGWQVERKEGKADGKCLIEALXAILPPARP 665
N+++ ++ W+ DG CL+E + + + P P
Sbjct: 378 NLIK-RMELDWY------------DGPCLLELIDSFVAPQPP 406
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 171 bits (415), Expect = 5e-43
Identities = 80/196 (40%), Positives = 125/196 (63%), Gaps = 3/196 (1%)
Frame = +3
Query: 3 STXTGHLIYKCGGIDKRTIDKFEKEAQXMGKGSXXYAWVLDKLKAERERGIXIDIALWKX 182
ST G L++ G +DKRT++K+E+EA+ G+ S +W +D ERE+G +++
Sbjct: 123 STIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYF 182
Query: 183 EAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 362
E + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L
Sbjct: 183 ETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLV 242
Query: 363 FTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGD 539
T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +VP SG G
Sbjct: 243 KTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGA 302
Query: 540 NMLEPST--KMPWFKG 581
+ + T + W+ G
Sbjct: 303 FIKDRPTGSEGNWYSG 318
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 87.8 bits (208), Expect = 6e-18
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +3
Query: 3 STXTGHLIYKCGGIDKRTIDKFEKEAQXMGKGSXXYAWVLDKLKAER 143
ST TGHLIYKCGGIDKRTI+KFEKEAQ MGKGS YAWVLDKLK +
Sbjct: 21 STTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 84.6 bits (200), Expect = 6e-17
Identities = 51/132 (38%), Positives = 72/132 (54%)
Frame = +3
Query: 120 LDKLKAERERGIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 299
+DK K E++RGI I++A E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 300 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 479
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 480 KIGYNPAAVAFV 515
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 84.6 bits (200), Expect = 6e-17
Identities = 51/132 (38%), Positives = 72/132 (54%)
Frame = +3
Query: 120 LDKLKAERERGIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 299
+DK K E++RGI I++A E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 300 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 479
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 480 KIGYNPAAVAFV 515
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 75.4 bits (177), Expect = 3e-14
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Frame = +3
Query: 120 LDKLKAERERGIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 299
+D E+ RGI I+ + E + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 300 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 473
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 147 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 196
Query: 474 IKKIGY 491
+ + GY
Sbjct: 197 LNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 75.4 bits (177), Expect = 3e-14
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Frame = +3
Query: 120 LDKLKAERERGIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 299
+D E+ RGI I+ + E + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 300 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 473
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 474 IKKIGY 491
+ + GY
Sbjct: 198 LNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 75.4 bits (177), Expect = 3e-14
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Frame = +3
Query: 120 LDKLKAERERGIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 299
+D E+ RGI I+ + E + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 300 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 473
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 474 IKKIGY 491
+ + GY
Sbjct: 198 LNEFGY 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.8 bits (116), Expect = 8e-07
Identities = 34/98 (34%), Positives = 48/98 (48%)
Frame = +3
Query: 117 VLDKLKAERERGIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 296
+LDKL+ ERERGI + Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 297 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 410
G QT + LAF + Q+I +NK+D
Sbjct: 136 NQG-------VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 44.0 bits (99), Expect = 1e-04
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +3
Query: 201 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 380
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 381 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--NPAAVAFVPISGWHGDNMLE 551
++I+ +NK D E + + E K+V +K +G N V G+ + ML+
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQ 181
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/70 (40%), Positives = 33/70 (47%)
Frame = +3
Query: 201 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 380
VT +D PGH F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 381 QLIVGVNKMD 410
QL+V VNK+D
Sbjct: 258 QLVVAVNKID 267
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/106 (30%), Positives = 44/106 (41%)
Frame = +3
Query: 93 KGSXXYAWVLDKLKAERERGIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQAD 272
+G +D + ER+RGI I A + + IID PGH DF + D
Sbjct: 78 RGKDDVGATMDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLD 137
Query: 273 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 410
AVL++ G G G+ T L + + I VNKMD
Sbjct: 138 GAVLVL-CGVG----GVQSQTFTVNRQLARYNV---PFICFVNKMD 175
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +3
Query: 198 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 377
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 378 KQLIVGVNKMDSTEPPYSEPRFEEI 452
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +3
Query: 117 VLDKLKAERERGIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 296
V D L ERERGI + A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 297 GTG 305
G
Sbjct: 124 SAG 126
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 403 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 275
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.32
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +3
Query: 207 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 386
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 387 IVGVNKMDSTEPPYSEPR 440
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.5 bits (68), Expect = 0.56
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = +3
Query: 123 DKLKAERERGIXI-----DIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 287
D L E++RG I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 288 VAAGTG 305
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.5 bits (68), Expect = 0.56
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = +3
Query: 123 DKLKAERERGIXI-----DIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 287
D L E++RG I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 288 VAAGTG 305
V A G
Sbjct: 107 VDAHEG 112
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +3
Query: 120 LDKLKAERERGIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 290
+D + E+ RGI + + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +3
Query: 120 LDKLKAERERGIXIDIALWKXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 290
+D + E+ RGI + + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 466 PHTSRRLATTQLLSLSCPFLD 528
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 466 PHTSRRLATTQLLSLSCPFLD 528
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 466 PHTSRRLATTQLLSLSCPFLD 528
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 466 PHTSRRLATTQLLSLSCPFLD 528
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 177 KXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 305
K + + + +ID+PGH DF + D A+++V +G
Sbjct: 104 KEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 29.1 bits (62), Expect = 3.0
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +3
Query: 231 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 398
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 399 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 548
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 564
Query: 549 EPSTKMPWFKGWQVER 596
+P + M +G +R
Sbjct: 565 DPISSMNIGRGTLAQR 580
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 29.1 bits (62), Expect = 3.0
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +3
Query: 231 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 398
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 399 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 548
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 589
Query: 549 EPSTKMPWFKGWQVER 596
+P + M +G +R
Sbjct: 590 DPISSMNIGRGTLAQR 605
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 177 KXEAXXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 305
K + + + +ID+PGH DF + D A+++V +G
Sbjct: 104 KEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 183 EAXXYYVTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 296
E V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 67 EGRVLMVQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 27.5 bits (58), Expect = 9.1
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = -2
Query: 386 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 228
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 227 VSRSINDGNI 198
S S +D I
Sbjct: 84 FSGSKSDAEI 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,253,516
Number of Sequences: 27780
Number of extensions: 318414
Number of successful extensions: 902
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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