Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_A11
         (867 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.6  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   6.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   6.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   8.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.4  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 444 CLVLDTPVPV*QTTKHSVDLIVWL 373
           CL L+  VP  +T   S+ +I W+
Sbjct: 105 CLYLNVYVPADRTPSQSLPVIFWI 128


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 444 CLVLDTPVPV*QTTKHSVDLIVWL 373
           CL L+  VP  +T   S+ +I W+
Sbjct: 105 CLYLNVYVPADRTPSQSLPVIFWI 128


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = +2

Query: 824 CPWWYACW 847
           C WW  CW
Sbjct: 488 CCWWKICW 495


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = +2

Query: 824 CPWWYACW 847
           C WW  CW
Sbjct: 541 CCWWKICW 548


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 736 QEHVLLRPKPMLQLVQHPGISLASLE 813
           QEH    P+  +Q +  PGI +A ++
Sbjct: 413 QEHKNTLPQYTVQQLDFPGIEIADIK 438


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +2

Query: 83  SLHNNYPIN 109
           S+HNNYP++
Sbjct: 585 SIHNNYPVH 593


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,204
Number of Sequences: 438
Number of extensions: 3896
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)