Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_A09
(913 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.078
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.078
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.078
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.078
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.078
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.078
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.078
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.078
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 25 1.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 1.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 1.3
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 24 2.2
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 24 2.2
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 24 2.2
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 2.9
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 5.1
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 5.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 6.7
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 6.7
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 6.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.7
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 8.9
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 8.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 8.9
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.078
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 271 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 173
P+ RPAT E T SLP E L +++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.078
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 271 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 173
P+ RPAT E T SLP E L +++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.078
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 271 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 173
P+ RPAT E T SLP E L +++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.078
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 271 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 173
P+ RPAT E T SLP E L +++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.078
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 271 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 173
P+ RPAT E T SLP E L +++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.078
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 271 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 173
P+ RPAT E T SLP E L +++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 28.7 bits (61), Expect = 0.078
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 271 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 173
P+ RPAT E T SLP E L +++ L
Sbjct: 441 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 473
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 28.7 bits (61), Expect = 0.078
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 271 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 173
P+ RPAT E T SLP E L +++ L
Sbjct: 441 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 473
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 24.6 bits (51), Expect = 1.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 477 FYRSILMKVTFFNVGK*KYILNLR*KPIFYGYN 575
FY SI+ +T N + Y NL I+Y YN
Sbjct: 26 FYGSIMFSMTQVNKEECDYYQNLNLGEIYYIYN 58
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.6 bits (51), Expect = 1.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 596 GGHAGCARILRCHLPTF 646
G GC +LRC +P+F
Sbjct: 141 GASRGCTAVLRCVVPSF 157
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 1.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 596 GGHAGCARILRCHLPTF 646
G GC +LRC +P+F
Sbjct: 141 GASRGCTAVLRCVVPSF 157
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 482 VERYPIPLTKFRQRLQVIS*LAKLLPVFTN 393
VE YP + K+ QRL+ I K P F +
Sbjct: 447 VEGYPHAVPKYIQRLKAIRATLKASPFFAS 476
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 482 VERYPIPLTKFRQRLQVIS*LAKLLPVFTN 393
VE YP + K+ QRL+ I K P F +
Sbjct: 362 VEGYPHAVPKYIQRLKAIRATLKASPFFAS 391
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 482 VERYPIPLTKFRQRLQVIS*LAKLLPVFTN 393
VE YP + K+ QRL+ I K P F +
Sbjct: 681 VEGYPHAVPKYIQRLKAIRATLKASPFFAS 710
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 138 SMGLGAGTRCEPVGT 94
++G AG C+PVGT
Sbjct: 283 AIGTAAGMMCQPVGT 297
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.6 bits (46), Expect = 5.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 673 RLYHHWNSVVYF*NLNSYRRLYRNCYHNITSI 768
R H+ N+ Y N N+Y + Y+NI I
Sbjct: 88 RTIHNNNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -3
Query: 542 IQNIFLFSNVKKRNFHQY*PVERYPIPL 459
++NI L N+KK + + PV+++ +P+
Sbjct: 203 LRNIVL-DNIKKSGYKKPTPVQKHALPI 229
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +1
Query: 682 HHWNSVVYF*NLNSYRRLYRNCYHNITSI*DAXNTIAAYF 801
H+ N+ Y N N+Y + Y+NI I + Y+
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYY 130
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +1
Query: 682 HHWNSVVYF*NLNSYRRLYRNCYHNITSI*DAXNTIAAYF 801
H+ N+ Y N N+Y + Y+NI I + Y+
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYY 130
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +1
Query: 682 HHWNSVVYF*NLNSYRRLYRNCYHNITSI*DAXNTIAAYF 801
H+ N+ Y N N+Y + Y+NI I + Y+
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPIPVPVYY 130
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 6.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 712 NLNSYRRLYRNCYHNITSI 768
N N+Y Y+ Y+NI +I
Sbjct: 323 NYNNYNNNYKPLYYNIINI 341
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 8.9
Identities = 6/26 (23%), Positives = 16/26 (61%)
Frame = -2
Query: 603 WPPSHI*LLYYIHKISVFTANSKYIF 526
W P H+ L Y+++ S + +++++
Sbjct: 273 WAPFHVQRLLYVYEDSTYDDINQWVY 298
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 718 NSYRRLYRNCYHNITSI 768
N+Y++LY+N NI I
Sbjct: 111 NNYKKLYKNYIINIEQI 127
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 718 NSYRRLYRNCYHNITSI 768
N+Y++LY+N NI I
Sbjct: 111 NNYKKLYKNYIINIEQI 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,636
Number of Sequences: 438
Number of extensions: 5051
Number of successful extensions: 44
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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