Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_A07
         (555 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40941-4|AAA81709.1|  771|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U40941-3|AAM51502.1|  730|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z92822-7|CAH10786.1|  601|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z83244-9|CAH10804.1|  601|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z83244-1|CAB05827.2|  634|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AF145376-1|AAD39815.1|  634|Caenorhabditis elegans LIT-1 protein.      28   5.2  

>U40941-4|AAA81709.1|  771|Caenorhabditis elegans Hypothetical
           protein F35C8.7a protein.
          Length = 771

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 97  RWFLLPLRCC*WC 135
           +WFL+ L+CC WC
Sbjct: 602 KWFLMCLKCCFWC 614


>U40941-3|AAM51502.1|  730|Caenorhabditis elegans Hypothetical
           protein F35C8.7b protein.
          Length = 730

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 97  RWFLLPLRCC*WC 135
           +WFL+ L+CC WC
Sbjct: 561 KWFLMCLKCCFWC 573


>Z92822-7|CAH10786.1|  601|Caenorhabditis elegans Hypothetical
           protein W06F12.1d protein.
          Length = 601

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = -2

Query: 179 VSIVDEHLRLGADRAHHQQHRKGNKNHRFEHFVIXTNHS 63
           + I+ EH +L A  AHHQ H++ + + +++     T+H+
Sbjct: 55  IPIIPEH-QLAAVAAHHQHHQQLHPSVQYQLVAAATHHN 92


>Z83244-9|CAH10804.1|  601|Caenorhabditis elegans Hypothetical
           protein W06F12.1d protein.
          Length = 601

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = -2

Query: 179 VSIVDEHLRLGADRAHHQQHRKGNKNHRFEHFVIXTNHS 63
           + I+ EH +L A  AHHQ H++ + + +++     T+H+
Sbjct: 55  IPIIPEH-QLAAVAAHHQHHQQLHPSVQYQLVAAATHHN 92


>Z83244-1|CAB05827.2|  634|Caenorhabditis elegans Hypothetical
           protein W06F12.1a protein.
          Length = 634

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = -2

Query: 179 VSIVDEHLRLGADRAHHQQHRKGNKNHRFEHFVIXTNHS 63
           + I+ EH +L A  AHHQ H++ + + +++     T+H+
Sbjct: 88  IPIIPEH-QLAAVAAHHQHHQQLHPSVQYQLVAAATHHN 125


>AF145376-1|AAD39815.1|  634|Caenorhabditis elegans LIT-1 protein.
          Length = 634

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = -2

Query: 179 VSIVDEHLRLGADRAHHQQHRKGNKNHRFEHFVIXTNHS 63
           + I+ EH +L A  AHHQ H++ + + +++     T+H+
Sbjct: 88  IPIIPEH-QLAAVAAHHQHHQQLHPSVQYQLVAAATHHN 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,105,362
Number of Sequences: 27780
Number of extensions: 152480
Number of successful extensions: 385
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)