Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_A05
         (862 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023637-1|AAY85037.1|  172|Drosophila melanogaster IP05651p pro...    51   2e-06
AE014298-3073|AAF50865.1|  131|Drosophila melanogaster CG15449-P...    51   2e-06
AE014298-1261|AAF46435.2|  125|Drosophila melanogaster CG7267-PB...    37   0.041

>BT023637-1|AAY85037.1|  172|Drosophila melanogaster IP05651p
           protein.
          Length = 172

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 27/66 (40%), Positives = 35/66 (53%)
 Frame = +3

Query: 9   RXPSHKRIDIFSSLVGVALFVASGAIIIDXFQHYGKREXXXXXXXXXXXXIINGAILLVD 188
           R P HKRIDIF S++G  LFVASG  II+ ++   +              I+NG +   D
Sbjct: 105 RAPIHKRIDIFFSVLGCTLFVASGVFIIEAWEFSFRTRTRDLALIKASLSIVNGVLFGFD 164

Query: 189 AVLTQR 206
           AV T R
Sbjct: 165 AVFTFR 170


>AE014298-3073|AAF50865.1|  131|Drosophila melanogaster CG15449-PA
           protein.
          Length = 131

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 27/66 (40%), Positives = 35/66 (53%)
 Frame = +3

Query: 9   RXPSHKRIDIFSSLVGVALFVASGAIIIDXFQHYGKREXXXXXXXXXXXXIINGAILLVD 188
           R P HKRIDIF S++G  LFVASG  II+ ++   +              I+NG +   D
Sbjct: 64  RAPIHKRIDIFFSVLGCTLFVASGVFIIEAWEFSFRTRTRDLALIKASLSIVNGVLFGFD 123

Query: 189 AVLTQR 206
           AV T R
Sbjct: 124 AVFTFR 129


>AE014298-1261|AAF46435.2|  125|Drosophila melanogaster CG7267-PB
           protein.
          Length = 125

 Score = 36.7 bits (81), Expect = 0.041
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +3

Query: 24  KRIDIFSSLVGVALFVASGAIIIDXFQHYG--KREXXXXXXXXXXXXIINGAILLVDAV 194
           KR++   SL+G  LFVASGA++ID + H G    +            IIN A+ L+D +
Sbjct: 63  KRLNALFSLIGCLLFVASGALVIDEW-HGGLLNTDRKRQAIGAGSLMIINAAVFLLDTL 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,236,168
Number of Sequences: 53049
Number of extensions: 629713
Number of successful extensions: 1172
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)