Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_A01
(855 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0396 - 3128047-3128273,3128350-3128632,3128717-3128874,312... 31 1.5
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 31 1.5
11_01_0412 + 3131673-3131903,3133192-3133971 30 2.0
03_05_0399 - 23799830-23800090,23803448-23803558,23803685-23803693 29 3.6
02_05_0277 - 27390783-27391153,27391229-27391507,27391580-273919... 29 3.6
12_01_0977 - 9900073-9900521,9900594-9900698,9900770-9900959,990... 29 4.7
04_04_1028 + 30230224-30231274,30231500-30231609,30232144-302321... 29 4.7
04_04_0298 + 24228569-24228763,24229792-24229900,24230001-242300... 29 4.7
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 29 4.7
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 29 6.2
11_01_0384 - 2908789-2908991,2909104-2909464,2909574-2909731,290... 29 6.2
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 29 6.2
10_05_0092 - 9106725-9106769,9107172-9107367,9107525-9107898 29 6.2
08_02_1416 - 26915306-26915459,26915553-26915668,26915798-269159... 29 6.2
06_03_1291 + 29062073-29062477 28 8.3
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 28 8.3
04_01_0079 + 886004-886531 28 8.3
01_03_0016 + 11673258-11673854 28 8.3
>12_01_0396 -
3128047-3128273,3128350-3128632,3128717-3128874,
3129097-3129314,3129682-3129912,3130630-3130691
Length = 392
Score = 30.7 bits (66), Expect = 1.5
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +1
Query: 727 RPAGLHREVKRDHVLVSGGHARRQVG 804
+PA +HR++K D++ ++G H + ++G
Sbjct: 129 KPAIIHRDLKCDNIFINGNHGKVKIG 154
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/84 (20%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +2
Query: 272 KDRLIAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYA 451
KD+LI D + R+ + +++ +++ EEK+ ++ + K E ++++ + + +D + A
Sbjct: 485 KDKLIKEKDDIVFRLTKEKEEIIKLLEEKEDIIILM---KEKEDMVNLGKGEDEDRKQMA 541
Query: 452 DRILSRAMTV--EVTVRTDRDHQQ 517
D R + ++ VR ++ ++
Sbjct: 542 DDNKDRLIKEKDDIVVRLTKEKEE 565
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/73 (24%), Positives = 38/73 (52%)
Frame = +2
Query: 242 ESSVLGTQAPKDRLIAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISE 421
E + T KDRLI + V +R+ +++ VR+ +EK+ ++ + K E ++ + +
Sbjct: 415 EGTTKMTDDNKDRLIKEKNDVVLRLTEEKEEMVRLLKEKEDIIRLM---KEKEDMVYLEK 471
Query: 422 CDKDDITRYADRI 460
+ +D + D I
Sbjct: 472 GEVEDRKQMTDDI 484
>11_01_0412 + 3131673-3131903,3133192-3133971
Length = 336
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -2
Query: 746 RCSPAGLGVVS*RASDRRGCSPGWP-SQSSCRCPRWGPAETCTRSYRSGNGNAHSLRRCA 570
R P+G ++ A+ R PG S S CR P + C + SG G A +L C+
Sbjct: 193 RSMPSGQETLATTAASNRNHRPGATFSGSGCREPASAGSGLCKPASGSGGGAAKALGGCS 252
Query: 569 R 567
R
Sbjct: 253 R 253
>03_05_0399 - 23799830-23800090,23803448-23803558,23803685-23803693
Length = 126
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/36 (36%), Positives = 25/36 (69%), Gaps = 4/36 (11%)
Frame = +2
Query: 296 DQVEMRVERLRKDTV----RIEEEKDSLLSTLDSIK 391
D VE R+E++++D R+E+EK+S++S + +K
Sbjct: 75 DDVETRLEQMKEDAAKKLERLEQEKESIVSQMAELK 110
>02_05_0277 -
27390783-27391153,27391229-27391507,27391580-27391970,
27392042-27392199,27392755-27392975,27393059-27393286,
27394231-27394268,27394616-27394693
Length = 587
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 721 TPRPAGLHREVKRDHVLVSGGHARRQVGVL 810
T +P +HR++K D++ V+G H ++G L
Sbjct: 144 THQPPIIHRDLKCDNIFVNGNHGEVKIGDL 173
>12_01_0977 -
9900073-9900521,9900594-9900698,9900770-9900959,
9901035-9901093,9901297-9901688,9901770-9902059,
9902146-9903030
Length = 789
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 287 AVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIK 391
A + Q+E ++E LRKD + E+DS L ++ K
Sbjct: 609 ARMAQMEKQIEALRKDKAELAAERDSALKEVEDRK 643
>04_04_1028 +
30230224-30231274,30231500-30231609,30232144-30232170,
30233107-30234252
Length = 777
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Frame = -2
Query: 671 SQSSC--RCPRWGPAETCTRSYRSGNGNAHSLRRCAR----TSPADRCTCSPDTELPPAD 510
++SSC R G C Y NGN + C T P D +P L A
Sbjct: 315 NESSCMDRFMGEGYVCRCKAGYDQHNGNPYEAGGCQAYSVITLPEDILALAPIIRLVMAT 374
Query: 509 GLGQCALSPL 480
G GQ AL+P+
Sbjct: 375 GQGQGALTPI 384
>04_04_0298 +
24228569-24228763,24229792-24229900,24230001-24230069,
24230159-24230262,24230361-24230490,24231270-24231374,
24231479-24231689,24231917-24231927,24232331-24232341,
24233863-24233979,24234376-24234441,24234728-24234790,
24236577-24236652,24238003-24238064,24238573-24238658,
24238978-24239026,24239099-24239279,24239448-24239596,
24239682-24239750,24240920-24240991,24241122-24241269,
24241403-24241498,24242024-24242094,24242223-24242338,
24242453-24242498,24242611-24242781
Length = 860
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 344 IEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEVTVRTDR 505
I +EK +L +++ IKH E++L E KDD T D +V + V +R
Sbjct: 639 IRDEKVKVLQSVNPIKHDEVVLGQYEGYKDDPTVPDDSNTPTFASVVLRVHNER 692
>03_05_0640 -
26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 353 EKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEVTV 493
E+DS + S SEL+ +IS+ +++DIT D I + E+ V
Sbjct: 466 EQDSKIQEAVSASDSELISEISDVEQEDITDKGDVIDDGFLAEELNV 512
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/89 (25%), Positives = 32/89 (35%)
Frame = +1
Query: 460 PVPGYDRRGDSAH*PRPSAGGSSVSGEHVHRSAGDVRAQRRSECAFPLPDLYERVHVSAG 639
P P +R PRPS G S H + ++R RS P + + S
Sbjct: 639 PAPDGERSSVLGRSPRPSPPGRSHCHSHSRSRSPELRGHARSRSCSPATGRQD--NQSTS 696
Query: 640 PQRGHRQEL*DGHPGLHPRRSEARQETTP 726
PQR + + G E R+ TP
Sbjct: 697 PQRREKHQ--TKSSGQAKEHDEKRRSYTP 723
>11_01_0384 -
2908789-2908991,2909104-2909464,2909574-2909731,
2909877-2910097,2910909-2911139,2911545-2911582,
2911700-2911804
Length = 438
Score = 28.7 bits (61), Expect = 6.2
Identities = 8/26 (30%), Positives = 19/26 (73%)
Frame = +1
Query: 727 RPAGLHREVKRDHVLVSGGHARRQVG 804
+P +HR++K D++ ++G H + ++G
Sbjct: 156 KPPIIHRDLKCDNIFINGNHGKVKIG 181
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Frame = +2
Query: 293 LDQVEMRVERLRKDTVRIEEEK-------DSLLSTLDSIKHSELLLDISECDKDDITR 445
L VE R+ + KDTV E E + L LDS+++ L + D DD+ R
Sbjct: 1297 LSNVEDRLATVMKDTVATETEASYMRNLVEELTGQLDSLRNDHEKLQLKNKDADDLLR 1354
>10_05_0092 - 9106725-9106769,9107172-9107367,9107525-9107898
Length = 204
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +2
Query: 149 RFSESASQTMEVDQFALEIAYPEGSRLPLIDESSVLGTQAPKDRLIA 289
+F A+ ++F + +YP G L+D+ + T P D ++A
Sbjct: 50 QFVAGANHPNRNEEFVIASSYPNGFGTTLVDDWYLTATTNPNDNIVA 96
>08_02_1416 -
26915306-26915459,26915553-26915668,26915798-26915910,
26915995-26916130,26916219-26916338,26916472-26916648,
26916790-26916862,26916948-26917083,26917179-26918055,
26918138-26918331,26918438-26918620,26918730-26918796,
26918900-26919092,26919317-26919363,26919478-26919574,
26919663-26919790,26919905-26920009,26920763-26920879
Length = 1010
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +2
Query: 362 SLLSTLDSIKHSELLLDISECDK---DDITRYADRILSRAMT 478
S +S L S ELL S CDK DDITR A IL T
Sbjct: 433 STISPLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFT 474
>06_03_1291 + 29062073-29062477
Length = 134
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 680 GWPSQSSCRCPRWGPA-ETCTRSYRSGNGNAHSLRRCARTSPADRCTCSPDTEL 522
G+ Q + R P A E R +GNGNA A+ A C+CS DTE+
Sbjct: 83 GFRHQGALRIPCDVAAFEATLRLVAAGNGNAK-----AKDDAAAMCSCSSDTEI 131
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/99 (18%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +2
Query: 287 AVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILS 466
A + ++ ++ + + ++ ++SL STL +K + L++S+ DD+ + ++ S
Sbjct: 234 AQISSLQEEIKGHQDKAIDHQQVEESLRSTLSELKMVQEALELSKSQVDDLEQ---KLAS 290
Query: 467 RAMTV-EVTVRTDRDHQQEEALYQVNMYIDQLVMSVHND 580
+ + +T EE+L + + ++ + S H +
Sbjct: 291 QDANISHLTEELSLHRSSEESLKEKTLKLENELSSAHEE 329
>04_01_0079 + 886004-886531
Length = 175
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 448 RGPHPVPGYDRRGDSAH*PRPSAGGSSVSGEHVHRSAGDV-RAQRRS 585
+G P G R D RP+ G +V+G V RS GDV R RRS
Sbjct: 73 QGVLPASGGGNRPDPC---RPAGPGGAVAGGGVLRSGGDVWRGWRRS 116
>01_03_0016 + 11673258-11673854
Length = 198
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 544 VHRSAGDVRAQRRSECAFPLPDLYERVHVSAGPQRGHR 657
V RS+G +A+ +ECA + +L + A P+ GHR
Sbjct: 111 VVRSSGGEKAEAEAECAVCIAELRDGDECRALPRCGHR 148
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,621,454
Number of Sequences: 37544
Number of extensions: 539966
Number of successful extensions: 1704
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1703
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -