Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_A01
         (855 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        30   0.10 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    29   0.24 
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    25   3.9  
AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    24   5.1  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   6.8  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   9.0  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 29.9 bits (64), Expect = 0.10
 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
 Frame = +2

Query: 317 ERLRKDTVRIEEEKDSL--LSTLDSIKHSELLLDISECDKDDITRYADRIL-SRAMTVEV 487
           ERLR+D  ++EE++     L   D IK  EL+    +  + D  +   R+L S A   EV
Sbjct: 137 ERLRRDKAKVEEDQRHYRELKAADEIKRRELIQKAEDLIQKD--KVGPRVLESAAKFCEV 194

Query: 488 TVRTDRDHQ---QEEALYQV-NMYIDQLVMSVHNDAVSAH 595
               +   Q   ++E L Q+    +D   +S  N  + +H
Sbjct: 195 LKGREMQRQFRLEQEQLQQMRKQSVDTQTLSQANHWLKSH 234


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 28.7 bits (61), Expect = 0.24
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +2

Query: 221  SRLPLIDESSVLGTQAPKDRLIAVLDQVEMRVERLRK---DTVRIEEEKDSLLSTLDSIK 391
            S+L +  ++S    Q  KD++ ++ D+VE     +RK   +  ++EEE + L   L+ +K
Sbjct: 917  SKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMK 976


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 541 VHLIQSFLLLMVSVSAHCHLY 479
           V LI   L  +VSV+A C+LY
Sbjct: 300 VDLINGILASLVSVTAGCYLY 320


>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -3

Query: 583 CVVVHGHHQLIDVHVHLIQSFLLLMVSVSAHCHLYGHSPGQD 458
           C ++HG  ++I         FLLL+ SV     +    P  D
Sbjct: 9   CFILHGVSEIIPQQQKKTMKFLLLVASVLCLVLIVSARPADD 50


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 631 SAGPQRGHRQEL*DGHPGLHPRRSEARQETTPRPAGL 741
           SA PQ+  +Q+  + H    PR S +R    PR   L
Sbjct: 213 SAQPQQQQQQQQRNQHEQEQPRASTSRAVMPPRSEAL 249


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 233 GVVVNPLDTQSLMQID 186
           GVV+NPLD Q  +Q D
Sbjct: 492 GVVMNPLDAQCNVQRD 507


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 894,448
Number of Sequences: 2352
Number of extensions: 19868
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)