Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_P23
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC012448-1|AAH12448.1| 581|Homo sapiens thyroid hormone recepto... 194 3e-49
AF168418-1|AAF01278.1| 581|Homo sapiens activating signal coint... 194 3e-49
U66346-1|AAB96875.1| 791|Homo sapiens PDE4C-791 protein. 31 2.7
AK074057-1|BAB84883.1| 1546|Homo sapiens FLJ00128 protein protein. 31 2.7
AK024463-1|BAB15753.1| 1310|Homo sapiens FLJ00056 protein protein. 31 2.7
BC019655-1|AAH19655.1| 120|Homo sapiens SNX22 protein protein. 30 6.3
AY044653-1|AAK98767.1| 193|Homo sapiens sorting nexin SNX22 pro... 30 6.3
AK024014-1|BAB14776.1| 193|Homo sapiens protein ( Homo sapiens ... 30 6.3
AF439977-1|AAM33252.1| 216|Homo sapiens C7orf13 protein. 30 8.3
AC005759-1|AAC83050.1| 782|Homo sapiens PDE4C-791 protein. 30 8.3
>BC012448-1|AAH12448.1| 581|Homo sapiens thyroid hormone receptor
interactor 4 protein.
Length = 581
Score = 194 bits (472), Expect = 3e-49
Identities = 89/160 (55%), Positives = 113/160 (70%), Gaps = 2/160 (1%)
Frame = -1
Query: 601 NGFSQMSRIQDAELQEMSDTGRCLSMHQPWASLLVEGIKLHEGRSWYTSHRGRLWVAATV 422
N F RIQD E QE D G CLS+HQPWASLLV GIK EGRSWYT HRGRLW+AAT
Sbjct: 414 NSFQHQLRIQDQEFQEGFDGGWCLSVHQPWASLLVRGIKRVEGRSWYTPHRGRLWIAATA 473
Query: 421 KPPDQDVIKALENQYRVLYPEKQLQFPSFYPTGCLLGCVNVDDCLPQEEYRKMYPE--GE 248
K P + L+ YR+L K ++FP+ YP+GCLLGCV++ DCL Q+++++ +P+ E
Sbjct: 474 KKPSPQEVSELQATYRLL-RGKDVEFPNDYPSGCLLGCVDLIDCLSQKQFKEQFPDISQE 532
Query: 247 SDSPYVFICSNPVSLRLRFPIKGQHKIYXLEKTIHQAAMK 128
SDSP+VFIC NP + ++FPIKG KI+ L+ IHQ A K
Sbjct: 533 SDSPFVFICKNPQEMVVKFPIKGNPKIWKLDSKIHQGAKK 572
>AF168418-1|AAF01278.1| 581|Homo sapiens activating signal
cointegrator 1 protein.
Length = 581
Score = 194 bits (472), Expect = 3e-49
Identities = 89/160 (55%), Positives = 113/160 (70%), Gaps = 2/160 (1%)
Frame = -1
Query: 601 NGFSQMSRIQDAELQEMSDTGRCLSMHQPWASLLVEGIKLHEGRSWYTSHRGRLWVAATV 422
N F RIQD E QE D G CLS+HQPWASLLV GIK EGRSWYT HRGRLW+AAT
Sbjct: 414 NSFQHQLRIQDQEFQEGFDGGWCLSVHQPWASLLVRGIKRVEGRSWYTPHRGRLWIAATA 473
Query: 421 KPPDQDVIKALENQYRVLYPEKQLQFPSFYPTGCLLGCVNVDDCLPQEEYRKMYPE--GE 248
K P + L+ YR+L K ++FP+ YP+GCLLGCV++ DCL Q+++++ +P+ E
Sbjct: 474 KKPSPQEVSELQATYRLL-RGKDVEFPNDYPSGCLLGCVDLIDCLSQKQFKEQFPDISQE 532
Query: 247 SDSPYVFICSNPVSLRLRFPIKGQHKIYXLEKTIHQAAMK 128
SDSP+VFIC NP + ++FPIKG KI+ L+ IHQ A K
Sbjct: 533 SDSPFVFICKNPQEMVVKFPIKGNPKIWKLDSKIHQGAKK 572
>U66346-1|AAB96875.1| 791|Homo sapiens PDE4C-791 protein.
Length = 791
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 189 GNRSLRLTGLEQINTYGLSLSPSGYIFRYSSWGRQSSTLTQP 314
G RS +G Q+ G +LSPS +R+S+ G SS+L+ P
Sbjct: 5 GLRSGAPSGHRQLLGVGPTLSPSSTFYRFSTSGADSSSLSPP 46
>AK074057-1|BAB84883.1| 1546|Homo sapiens FLJ00128 protein protein.
Length = 1546
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 464 VHEPPREAVGRRHGEAP-RPGRHQGAG 387
V EPP EAVG G P RPG +G G
Sbjct: 360 VSEPPAEAVGEASGSCPLRPGELRGGG 386
>AK024463-1|BAB15753.1| 1310|Homo sapiens FLJ00056 protein protein.
Length = 1310
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 464 VHEPPREAVGRRHGEAP-RPGRHQGAG 387
V EPP EAVG G P RPG +G G
Sbjct: 124 VSEPPAEAVGEASGSCPLRPGELRGGG 150
>BC019655-1|AAH19655.1| 120|Homo sapiens SNX22 protein protein.
Length = 120
Score = 30.3 bits (65), Expect = 6.3
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -3
Query: 530 LHAPALGLVAR*RHQTPRRSFMVHEPPREAVGRRHGEAPRPGRHQGAGEPVQSSVSRKAI 351
+H P++G A Q+P +S MV GRRH R + ++ K
Sbjct: 4 VHIPSVGPEAEGPRQSPEKSHMVFRVEVLCSGRRHTVPRRYSEFHALHKRIKKLY--KVP 61
Query: 350 AIPLV-LSDWMSAGLRQRRR 294
P L +W + GL QRR+
Sbjct: 62 DFPSKRLPNWRTRGLEQRRQ 81
>AY044653-1|AAK98767.1| 193|Homo sapiens sorting nexin SNX22
protein.
Length = 193
Score = 30.3 bits (65), Expect = 6.3
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -3
Query: 530 LHAPALGLVAR*RHQTPRRSFMVHEPPREAVGRRHGEAPRPGRHQGAGEPVQSSVSRKAI 351
+H P++G A Q+P +S MV GRRH R + ++ K
Sbjct: 4 VHIPSVGPEAEGPRQSPEKSHMVFRVEVLCSGRRHTVPRRYSEFHALHKRIKKLY--KVP 61
Query: 350 AIPLV-LSDWMSAGLRQRRR 294
P L +W + GL QRR+
Sbjct: 62 DFPSKRLPNWRTRGLEQRRQ 81
>AK024014-1|BAB14776.1| 193|Homo sapiens protein ( Homo sapiens
cDNA FLJ13952 fis, clone Y79AA1001068. ).
Length = 193
Score = 30.3 bits (65), Expect = 6.3
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -3
Query: 530 LHAPALGLVAR*RHQTPRRSFMVHEPPREAVGRRHGEAPRPGRHQGAGEPVQSSVSRKAI 351
+H P++G A Q+P +S MV GRRH R + ++ K
Sbjct: 4 VHIPSVGPEAEGPRQSPEKSHMVFRVEVLCSGRRHTVPRRYSEFHALHKRIKKLY--KVP 61
Query: 350 AIPLV-LSDWMSAGLRQRRR 294
P L +W + GL QRR+
Sbjct: 62 DFPSKRLPNWRTRGLEQRRQ 81
>AF439977-1|AAM33252.1| 216|Homo sapiens C7orf13 protein.
Length = 216
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 482 PRRSFMVHEPPREAVGRRHGEAPRPGRHQGAG 387
PR F V PR GR H AP+P H G G
Sbjct: 82 PRAGFAVVRSPRRLCGRSH--APQPPAHLGLG 111
>AC005759-1|AAC83050.1| 782|Homo sapiens PDE4C-791 protein.
Length = 782
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 210 TGLEQINTYGLSLSPSGYIFRYSSWGRQSSTLTQP 314
+G Q+ G +LSPS +R+S+ G SS+L+ P
Sbjct: 3 SGHRQLLGVGPTLSPSSTFYRFSTSGADSSSLSPP 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,149,469
Number of Sequences: 237096
Number of extensions: 2565477
Number of successful extensions: 12335
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12331
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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