Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_P23
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80847-2|AAB37982.2| 475|Caenorhabditis elegans Hypothetical pr... 30 1.2
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 2.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 2.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 2.2
AC006695-7|AAM48553.1| 724|Caenorhabditis elegans Titin family ... 29 2.2
AC006695-6|AAU45229.1| 703|Caenorhabditis elegans Titin family ... 29 2.2
AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family ... 29 2.2
AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family ... 29 2.2
AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family ... 29 2.2
AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family ... 29 2.2
AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family ... 29 2.2
U80033-1|AAM15607.1| 381|Caenorhabditis elegans Synaptotagmin p... 29 3.8
AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical ... 29 3.8
Z29117-11|CAA82382.1| 307|Caenorhabditis elegans Hypothetical p... 28 5.0
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 28 5.0
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 28 6.7
AC006629-4|AAK18927.1| 197|Caenorhabditis elegans Hypothetical ... 28 6.7
Z93391-2|CAB07681.1| 490|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL132865-3|CAB60603.1| 310|Caenorhabditis elegans Hypothetical ... 27 8.8
>U80847-2|AAB37982.2| 475|Caenorhabditis elegans Hypothetical
protein C17H11.1 protein.
Length = 475
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +3
Query: 387 SSALMTSWSGGFTVAATHSLPRWLVYHERPSWSLMPSTSNEAQ 515
SS++M S SGGF VA L V E+ W + PSTS +Q
Sbjct: 392 SSSVMVS-SGGFGVANREYLSMESVQEEQKKWVVDPSTSPYSQ 433
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 280 EEYRKMYPEGESDSPYVFICSNPVSLRLRFPIKGQHKIYXLEKTIHQAAMKCIHVNV 110
+EYR E SP V N +R P+ G++K+ + +H +AM C HV++
Sbjct: 243 KEYRDSIHGVEMFSPDV----NRSVVRFSIPVAGEYKV--VASNVHGSAMSCGHVDI 293
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 280 EEYRKMYPEGESDSPYVFICSNPVSLRLRFPIKGQHKIYXLEKTIHQAAMKCIHVNV 110
+EYR E SP V N +R P+ G++K+ + +H +AM C HV++
Sbjct: 243 KEYRDSIHGVEMFSPDV----NRSVVRFSIPVAGEYKV--VASNVHGSAMSCGHVDI 293
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 280 EEYRKMYPEGESDSPYVFICSNPVSLRLRFPIKGQHKIYXLEKTIHQAAMKCIHVNV 110
+EYR E SP V N +R P+ G++K+ + +H +AM C HV++
Sbjct: 243 KEYRDSIHGVEMFSPDV----NRSVVRFSIPVAGEYKV--VASNVHGSAMSCGHVDI 293
>AC006695-7|AAM48553.1| 724|Caenorhabditis elegans Titin family
protein 1, isoform a protein.
Length = 724
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 280 EEYRKMYPEGESDSPYVFICSNPVSLRLRFPIKGQHKIYXLEKTIHQAAMKCIHVNV 110
+EYR E SP V N +R P+ G++K+ + +H +AM C HV++
Sbjct: 243 KEYRDSIHGVEMFSPDV----NRSVVRFSIPVAGEYKV--VASNVHGSAMSCGHVDI 293
>AC006695-6|AAU45229.1| 703|Caenorhabditis elegans Titin family
protein 1, isoform b protein.
Length = 703
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 280 EEYRKMYPEGESDSPYVFICSNPVSLRLRFPIKGQHKIYXLEKTIHQAAMKCIHVNV 110
+EYR E SP V N +R P+ G++K+ + +H +AM C HV++
Sbjct: 243 KEYRDSIHGVEMFSPDV----NRSVVRFSIPVAGEYKV--VASNVHGSAMSCGHVDI 293
>AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform g protein.
Length = 1769
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 280 EEYRKMYPEGESDSPYVFICSNPVSLRLRFPIKGQHKIYXLEKTIHQAAMKCIHVNV 110
+EYR E SP V N +R P+ G++K+ + +H +AM C HV++
Sbjct: 243 KEYRDSIHGVEMFSPDV----NRSVVRFSIPVAGEYKV--VASNVHGSAMSCGHVDI 293
>AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform f protein.
Length = 1769
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 280 EEYRKMYPEGESDSPYVFICSNPVSLRLRFPIKGQHKIYXLEKTIHQAAMKCIHVNV 110
+EYR E SP V N +R P+ G++K+ + +H +AM C HV++
Sbjct: 243 KEYRDSIHGVEMFSPDV----NRSVVRFSIPVAGEYKV--VASNVHGSAMSCGHVDI 293
>AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform e protein.
Length = 1769
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 280 EEYRKMYPEGESDSPYVFICSNPVSLRLRFPIKGQHKIYXLEKTIHQAAMKCIHVNV 110
+EYR E SP V N +R P+ G++K+ + +H +AM C HV++
Sbjct: 243 KEYRDSIHGVEMFSPDV----NRSVVRFSIPVAGEYKV--VASNVHGSAMSCGHVDI 293
>AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform d protein.
Length = 1769
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 280 EEYRKMYPEGESDSPYVFICSNPVSLRLRFPIKGQHKIYXLEKTIHQAAMKCIHVNV 110
+EYR E SP V N +R P+ G++K+ + +H +AM C HV++
Sbjct: 243 KEYRDSIHGVEMFSPDV----NRSVVRFSIPVAGEYKV--VASNVHGSAMSCGHVDI 293
>AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform c protein.
Length = 1769
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 280 EEYRKMYPEGESDSPYVFICSNPVSLRLRFPIKGQHKIYXLEKTIHQAAMKCIHVNV 110
+EYR E SP V N +R P+ G++K+ + +H +AM C HV++
Sbjct: 243 KEYRDSIHGVEMFSPDV----NRSVVRFSIPVAGEYKV--VASNVHGSAMSCGHVDI 293
>U80033-1|AAM15607.1| 381|Caenorhabditis elegans Synaptotagmin
protein 4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = -3
Query: 530 LHAPALGLVAR*RHQTPRRSFMVHEPPREAVGRRHGEAPRPGRHQGAGEPVQSSVSRKAI 351
L A A L R R Q P S ++ PPR+ + R G PG + + P+QS +S +
Sbjct: 30 LVAVAALLAVRKRRQYP--SLLL--PPRQVIAVRGGFPKGPGGLKQSPSPLQSPLSNDST 85
Query: 350 AIPLV 336
P+V
Sbjct: 86 PSPVV 90
>AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical
protein Y45G12B.2a protein.
Length = 309
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 119 CKCPXYKPTQLKCYENLLFIFLYIKIPNN 33
CKCP K T L CYE+ + + + + N+
Sbjct: 4 CKCPKRKVTNLFCYEHRVNVCEFCLVDNH 32
>Z29117-11|CAA82382.1| 307|Caenorhabditis elegans Hypothetical
protein C48B4.11 protein.
Length = 307
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 123 IHFIAA**IVFSSXYILCCPLIGNRSLRLTGLEQINTYGLSLSPSGYIFR 272
IHF+ IVFS + L C L+ + LE +++YGL + Y+ R
Sbjct: 211 IHFVGQA-IVFSVIFFLLCCLLAYEYSPVAALEFLDSYGL-VQVKSYVVR 258
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 206 PKASVSDQRTT*NISTRKNNSSSRNEMYSCKC 111
P+++ DQ T +S K+NS S N+ CKC
Sbjct: 178 PQSASKDQSRTGGVSL-KDNSGSTNQKKKCKC 208
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = -2
Query: 375 EFCIQKSNCNSPRSIRLDVCWAAST---STTAC-PRRSI 271
E+C + S+C S R +VC AS S+ +C PR S+
Sbjct: 1265 EYCFRNSHCESQRQCLKNVCKCASNFVQSSFSCVPRMSV 1303
>AC006629-4|AAK18927.1| 197|Caenorhabditis elegans Hypothetical
protein F12E12.3 protein.
Length = 197
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 211 VSLRLRFPIKGQHKIYXLEKTIHQAAM 131
V +RL+F I+ H+IY K HQ AM
Sbjct: 42 VDVRLQFEIQDDHQIYENFKDKHQEAM 68
>Z93391-2|CAB07681.1| 490|Caenorhabditis elegans Hypothetical
protein W04G5.4 protein.
Length = 490
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -1
Query: 244 DSPYVFICSNPVSLRLRFPIKGQHKIYXLEKTIHQAAMKCIHVNVXNT 101
D+ Y+++ P LRL FPI K LE I + +K + + NT
Sbjct: 27 DTLYIYVQPEP-DLRLFFPISSYLKPIELEPNIEENYLKFTYNIIENT 73
>AL132865-3|CAB60603.1| 310|Caenorhabditis elegans Hypothetical
protein Y62E10A.4 protein.
Length = 310
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = -1
Query: 403 VIKALENQYRVLYPEKQLQFPSFYPTGCLLGCVNVDDCLPQEEYRKMYPEGESDSPYVFI 224
+I L+ Y V YP + Q P+ + L CV + Y SDS V +
Sbjct: 100 LIIGLDRLYNVTYPLRYSQLPNSFYIALFLFCVGFSVLITYSGY-----SYASDSEIVLV 154
Query: 223 CSNPVS 206
C P +
Sbjct: 155 CLPPTA 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,035,253
Number of Sequences: 27780
Number of extensions: 373701
Number of successful extensions: 1170
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -