Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_P23
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   3.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.0  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   7.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.9  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 412 DQDVIKALENQYRVLYP 362
           +QDVIK++E  YR+  P
Sbjct: 844 NQDVIKSIEKGYRLPAP 860


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 577  YETSGRTRWLEQQSHNPHXP 636
            Y T  RT W +QQ   P  P
Sbjct: 1342 YSTLERTAWRQQQPPPPPPP 1361


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -1

Query: 619 ATVVRANGFSQMSRIQDAELQEM 551
           A ++RANG +++ +I    ++++
Sbjct: 15  AVIIRANGINEILKIMAVSMKDI 37


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 343  PSFYPTGCLLGCVNVDDCLPQEEY 272
            P F P+  + G  NV   LP++ +
Sbjct: 1167 PPFMPSPFMAGAPNVPTILPEQYF 1190


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,241
Number of Sequences: 438
Number of extensions: 4476
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)