Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_P20
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 229 2e-60
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 181 6e-46
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 163 2e-40
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 152 3e-37
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 101 4e-22
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 33 0.29
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 33 0.29
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 30 1.6
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 30 1.6
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 30 1.6
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 30 1.6
Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical pr... 30 2.1
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 30 2.1
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 28 6.3
AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical ... 28 6.3
Z81109-1|CAB03245.1| 485|Caenorhabditis elegans Hypothetical pr... 28 8.4
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 229 bits (559), Expect = 2e-60
Identities = 107/203 (52%), Positives = 144/203 (70%)
Frame = -3
Query: 764 AYEAXAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNAS 585
A+E E+VPV V K+G ++ +DEE+ +VNF+KFT L TVFQK+ GT+TA NAS
Sbjct: 207 AWENGNIGPEVVPVNVKSKKGVTIV-DKDEEFTKVNFDKFTSLRTVFQKD-GTITAANAS 264
Query: 584 TLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRK 405
TLNDG ++KP+ARI+ + D P+DF +AP + PK+LE+ GV++
Sbjct: 265 TLNDGAAAVIVASQEAVSEQSLKPLARILAYGDAATHPLDFAVAPTLMFPKILERAGVKQ 324
Query: 404 EDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKK 225
DVA WE+NEAFS V +A K LG+DPS +N HGGAVS+GHPIGMSGAR++ HL H LK
Sbjct: 325 SDVAQWEVNEAFSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGARLITHLVHTLKS 384
Query: 224 GEKGVASICNGGGGASSVMIEKM 156
G+ GVA+ICNGGGG+S ++I+K+
Sbjct: 385 GQIGVAAICNGGGGSSGMVIQKL 407
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 181 bits (440), Expect = 6e-46
Identities = 92/204 (45%), Positives = 134/204 (65%), Gaps = 1/204 (0%)
Frame = -3
Query: 764 AYEAXAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKEN-GTVTAGNA 588
A+ + F +E+VPV V R + V+ EDEEYK++ K + L VF ++ GT+T NA
Sbjct: 189 AWSSEKFSEEVVPVSVKTSR-SEVVITEDEEYKKLIESKVSSLKPVFVRDGTGTITPANA 247
Query: 587 STLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVR 408
S+LNDG + P+A +V FA+ PIDF +AP A+ LL+K+G++
Sbjct: 248 SSLNDGAVATVVVGENALPQ-GAHPLAELVAFAEAGRAPIDFTVAPVDAVRLLLKKSGLQ 306
Query: 407 KEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALK 228
D+ALWE+NEAF+V +A K L ++PS +NV GGAV++GHP+GMSG RIV L ++L
Sbjct: 307 VSDIALWELNEAFAVTVLAFIKELNIEPSVVNVKGGAVAIGHPLGMSGLRIVNSLAYSLA 366
Query: 227 KGEKGVASICNGGGGASSVMIEKM 156
G+ GVA+ICNGGG A++V+I+K+
Sbjct: 367 PGQLGVAAICNGGGEATAVLIKKL 390
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 163 bits (395), Expect = 2e-40
Identities = 78/194 (40%), Positives = 118/194 (60%)
Frame = -3
Query: 737 ELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXX 558
E+V V V K+G + +D+ K ++ + S++ GT++ + + DG
Sbjct: 268 EVVAVNVKSKKGVEAV-KQDDITKIKKIKEGSVYSSIPIFPGGTISDKHIAAFTDGAAAV 326
Query: 557 XXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEIN 378
N+KP+ARI+ + D +DF +AP + P LL+ GV + DVA WE+N
Sbjct: 327 ILASQEAVSEQNLKPLARILAYGDAATHQLDFAVAPTLLFPNLLQSAGVEQSDVAQWEVN 386
Query: 377 EAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASIC 198
EAFS V +A K LG+DPS +N HGGAVS+GHPIGMSGA ++ HL H L+ G+ GVA++C
Sbjct: 387 EAFSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGASLITHLVHTLESGQIGVAALC 446
Query: 197 NGGGGASSVMIEKM 156
+G GG+S ++I+K+
Sbjct: 447 DGDGGSSGMVIQKL 460
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 152 bits (368), Expect = 3e-37
Identities = 80/205 (39%), Positives = 123/205 (60%), Gaps = 2/205 (0%)
Frame = -3
Query: 764 AYEAXAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNAS 585
A EA + +E+V + + ++G F DE + E KL VFQK+ G V AGNAS
Sbjct: 192 AQEAGVYKNEIVGITIKGRKGEES-FEIDEHPRATTAESLAKLKPVFQKD-GLVNAGNAS 249
Query: 584 TLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRK 405
++DG K N+KP+AR+V ++ CDP I PA AI ++L+K+G++
Sbjct: 250 GISDGAAALVVAGEDSVKSKNLKPLARVVAYSAVGCDPTIMGIGPAPAIREVLKKSGLKI 309
Query: 404 EDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHAL-- 231
D+ ++E+NEAF+ A+A Q+ LG+ K+NV+GGA++LGHP+ SGARI H+ H L
Sbjct: 310 GDIDIFEVNEAFAPQALAVQRELGIPMEKLNVNGGAIALGHPLAASGARISTHIVHELHR 369
Query: 230 KKGEKGVASICNGGGGASSVMIEKM 156
+ + G+ S C GGG +++ EK+
Sbjct: 370 RNVKYGIGSACIGGGQGIAILFEKV 394
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 101 bits (243), Expect = 4e-22
Identities = 72/212 (33%), Positives = 103/212 (48%), Gaps = 20/212 (9%)
Frame = -3
Query: 737 ELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXX 558
++VPV + K+ P ED + EK + L F K +GTVTA NAS L DG
Sbjct: 235 DVVPVFLDGKK--PKTIKEDNGIRVSTLEKLSSLKPAFVKPHGTVTAANASYLTDGASAA 292
Query: 557 XXXXXXXAKRLNVKPIARIVGFADGECDPID-FPIAPAVAIPKLLEKTGVRKEDVALWEI 381
A KP A + + DP D ++PA IPKLL+K G+ +DV ++EI
Sbjct: 293 LIMTEEYALANGYKPKAYLRDYLYVAQDPKDQLLLSPAYVIPKLLDKAGLTLKDVDVFEI 352
Query: 380 NEAFSVVAVANQKLLGLD-----------------PSKINVHGGAVSLGHPIGMSGARIV 252
+EAF+ +AN + D K+N+ GG++S+GHP G +G R+
Sbjct: 353 HEAFAGQVLANLNAMDSDYFCKEQMKRSGKFGRVPMDKLNLWGGSLSIGHPFGATGVRLA 412
Query: 251 VHLCHALK--KGEKGVASICNGGGGASSVMIE 162
H H LK KG+ V + C GG ++IE
Sbjct: 413 THSAHRLKEEKGQYAVIAACAAGGHGVGMLIE 444
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3
Query: 317 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 195
IN GG +S GHPIG +G V L + L +G+ G + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3
Query: 317 INVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICN 195
IN GG +S GHPIG +G V L + L +G+ G + N
Sbjct: 341 INPSGGLISKGHPIGATGVAQAVELSNQL-RGKCGKRQVPN 380
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 148 STYIFSIITDDAPPPPLQIEATPFSPFFK 234
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 148 STYIFSIITDDAPPPPLQIEATPFSPFFK 234
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 148 STYIFSIITDDAPPPPLQIEATPFSPFFK 234
S+ IFS + PPPP+ +ATP P +K
Sbjct: 384 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 412
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 148 STYIFSIITDDAPPPPLQIEATPFSPFFK 234
S+ IFS + PPPP+ +ATP P +K
Sbjct: 400 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 428
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 148 STYIFSIITDDAPPPPLQIEATPFSPFFK 234
S+ IFS + PPPP+ +ATP P +K
Sbjct: 423 SSSIFSQLFPAQPPPPVPEDATPTRPMYK 451
>Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 58 SFLFSLHSQKNLCNSVLSXHSNDYTLHFMLSTYIFSIITDDAPPPP 195
SF ++S+ N ++ H N+ + +LS+ ++ T APPPP
Sbjct: 10 SFPVFIYSEVNHATPLILPHRNEDPVFVLLSSTPSTLPTTSAPPPP 55
>Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 58 SFLFSLHSQKNLCNSVLSXHSNDYTLHFMLSTYIFSIITDDAPPPP 195
SF ++S+ N ++ H N+ + +LS+ ++ T APPPP
Sbjct: 10 SFPVFIYSEVNHATPLILPHRNEDPVFVLLSSTPSTLPTTSAPPPP 55
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3
Query: 341 LLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCHALKKGEKGVASICNGGGGASSVMIE 162
+LGL + +V V+L + + G VH+ A + KG + G GG+ S +E
Sbjct: 348 VLGLKKWQFDVWSNDVTLANQMESGGLAGRVHITDATRSYLKGAYILEEGNGGSRSKFLE 407
Query: 161 K 159
K
Sbjct: 408 K 408
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 312 CTWWSCQFGSSNWYVWSSHC 253
C+WWS G+SN Y +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -3
Query: 755 AXAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVT 600
A AFV + VP+ Q RG +FA+ ++ + F+K +S NG+V+
Sbjct: 169 AAAFVSGMTAVPI-QIRGR-TLFAQYSTHRELKFDKNKAISDTESVANGSVS 218
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 312 CTWWSCQFGSSNWYVWSSHC 253
C+WWS G+SN Y +HC
Sbjct: 114 CSWWSGCGGNSNIYYSYNHC 133
>AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical
protein F57E7.3 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 312 CTWWSCQFGSSNWYVWSSHCCTSV 241
CTW F S+ WY+ +SH + +
Sbjct: 2 CTWRGSYFESAEWYLLASHLLSCI 25
>Z81109-1|CAB03245.1| 485|Caenorhabditis elegans Hypothetical
protein R10D12.1 protein.
Length = 485
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 46 FLKTSFLFSLHSQKNLCNSVLSXHSNDYTLHFMLSTYIFSI 168
F +TS +FS+ LC SV S Y LH ++S +F+I
Sbjct: 185 FGQTSSIFSMPVAGELCTSVFGWKSVFY-LHAIISLVVFTI 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,315,174
Number of Sequences: 27780
Number of extensions: 346733
Number of successful extensions: 1167
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -