Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_pT_P16
(630 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 1.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.2
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 22 5.7
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 5.7
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 5.7
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 22 5.7
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 5.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 7.5
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 7.5
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 9.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.9
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.4 bits (48), Expect = 1.9
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -2
Query: 188 IWCSSCSKYIIVGNVTKAILSN 123
+W SSCS ++ + + A+++N
Sbjct: 278 VWMSSCSVFVFLSLMEFAVVNN 299
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 63 PSPPGGIMTRYTL 101
PS P G++T+YT+
Sbjct: 1203 PSQPNGVITQYTV 1215
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 472 VTMTQVIQWVQNPRTVTEAKN 410
+T TQV W QN RT + +N
Sbjct: 47 LTETQVKIWFQNRRTKWKKQN 67
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 484 RCGFEGSRLSNTRKLPKIQGCFSTKLHGNKVLK 582
R GFE R + L ++ CF L G++ K
Sbjct: 169 RTGFEHKRQPTSIDLNAVRLCFQVFLEGSQKRK 201
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 484 RCGFEGSRLSNTRKLPKIQGCFSTKLHGNKVLK 582
R GFE R + L ++ CF L G++ K
Sbjct: 169 RTGFEHKRQPTSIDLNAVRLCFQVFLEGSQKRK 201
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 136 ALVTLPTIMYF 168
AL+TLPTI +F
Sbjct: 327 ALITLPTIFWF 337
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 167 KYIIVGNVTKAILSN 123
KY ++GN TK I+ N
Sbjct: 449 KYDLIGNGTKLIIKN 463
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 7.5
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 163 YFEQLLHQININ 198
YFEQ L+++N N
Sbjct: 48 YFEQTLNELNFN 59
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 7.5
Identities = 15/52 (28%), Positives = 20/52 (38%)
Frame = -2
Query: 512 DRRDPSKPQRRLLRYHDTSDPMGTKPTYRD*SQELRAVERKVLRRRKPCMLG 357
D R K + LLR D+ D + TY A V + C+LG
Sbjct: 63 DGRVGGKRRNILLRRTDSMDSQNSASTYNSFLSSDSASSGNVYCKCDDCLLG 114
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 572 LFPCSLVEKQP*IFGSFLVLDRRDPS 495
LF C+ P ++G+F + DR S
Sbjct: 303 LFACTNSCMNPIVYGAFNIRDRNKTS 328
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 57 LGPSPPGGIMTRYTL 101
L P P GI+T+Y L
Sbjct: 1235 LPPLEPNGIITKYNL 1249
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 57 LGPSPPGGIMTRYTL 101
L P P GI+T+Y L
Sbjct: 1231 LPPLEPNGIITKYNL 1245
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,029
Number of Sequences: 438
Number of extensions: 4501
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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