Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_pT_P15
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81529-5|CAB04296.1|  288|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p...    28   6.1  

>Z81529-5|CAB04296.1|  288|Caenorhabditis elegans Hypothetical
           protein F35E8.7 protein.
          Length = 288

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -2

Query: 572 ISDV*HRNENR*C*LCTQRPTTTFPWAKPYRQSTTVAP 459
           + D  + N  + C  CT  PT T   A P   +TTVAP
Sbjct: 175 LQDFVNANCRKTCKRCTSGPTATTSTAAPAAPTTTVAP 212


>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
           protein C47A10.1 protein.
          Length = 1294

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = -1

Query: 540 VMLALYPTPNDDLSVGQALQAEYHGGTA 457
           +++A++P     ++VGQAL  +YHGG+A
Sbjct: 854 LVMAIFPF----MAVGQALMMKYHGGSA 877


>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
           protein C47A10.1 protein.
          Length = 1294

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = -1

Query: 540 VMLALYPTPNDDLSVGQALQAEYHGGTA 457
           +++A++P     ++VGQAL  +YHGG+A
Sbjct: 854 LVMAIFPF----MAVGQALMMKYHGGSA 877


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,658,851
Number of Sequences: 27780
Number of extensions: 248438
Number of successful extensions: 506
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)